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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Petersen, M. G., Ludvigsen, M., Grønbæk, K. & Nielsen, K. R. (2007). Designing for Co-located Social Media Use in the Home - Using the CASOME Infrastructure. In A. Venkatesh, T. Gonsalves, A. Monk & K. Buckner (Eds.), Home Informatics and Telematics: ICT for the Next Billion (pp. 251-267). Springer. https://doi.org/10.1007/978-0-387-73697-6_19
Møller, H. H., Dahl, M. R. & Grønbæk, K. (2007). EKGAR: Augmented Reality Support for Learning of Electrocardiography (ECG) Analysis. In Proceedings of World Conference on Educational Multimedia, Hypermedia and Telecommunications 2007 Association for the Advancement of Computing in Education.
Grønbæk, K. (2006, Sept 5). It og læring i bevægelse. EMU - Danmarks Læringsportal.
Mendling, J., Lassen, K. B. & Zdun, U. (2006). Experiences in enhancing existing BPM Tools with BPEL Import and Export. In Proceedings of the 4th International Conference Business Process Management: LNCS (Vol. 4102, pp. 348-357). Springer.
Westergaard, M. & Lassen, K. B. (2006). The BRITNeY Suite Animation Tool. In Petri Nets and Other Models of Concurrency ICATPN 2006 (Vol. 4024, pp. 331-340). Springer.
Lassen, K. B. (2006). Translating BPEL to FLOWer. (pp. 1-24). Aarhus Universitetsforlag.
Lassen, K. B. & Westergaard, M. (2006). Embedding Java Types in CPN Tools: Technical Report. http://www.daimi.au.dk/~krell/download.php?file=Embedding Java Types in CPN Tools.pdf.
Thomsen, K. & Manuilov, V. (2006). The group of unital C*-extensions. In B. Bojarski, A. Mishchenko & A. Weber (Eds.), C*-algebras and Elliptic Theory (pp. 151-156). Birkhäuser Verlag.
Lassen, K. B., van Dongen, B. & van der Aalst, W. M. P. (2007). Translating Message Sequence Charts to other Process Languages using Process Mining. (207 ed.) (pp. 1-15). Eindhoven Technical University.
Kramp, G., Kristensen, M. & Pedersen, J. F. (2007). Physical and Digital Design of the BlueBio Biomonitoring System Prototype, to be used in Emergency Medical Response. In Proceedings on 1st International Conference on Pervasive Computing Technologies for Healthcare 2006 IEEE.
Fukuda, K., Jensen, A. N., Lauritzen, N. & Thomas, R. (2007). The generic Gröbner walk. Journal of Symbolic Computation, 42, 298-312. https://doi.org/10.1016/j.jsc.2006.09.004
Nielsen, M. & Krukow, K. (2007). Trust Structures. International Journal of Information Security, 6(2-3), 153-181.
Nielsen, M., Krukow, K. & Sassone, V. (2007). A Bayesian Model for Event-based Trust. Electronic Notes in Theoretical Computer Science, 172, 499-521. https://doi.org/10.1016/j.entcs.2007.02.017
Addison, W. N., Azari, F., Sørensen, E. S., Kaartinen, M. T. & McKee, M. D. (2007). Pyrophosphate inhibits mineralization of osteoblast cultures by binding to mineral, upregulating osteopontin and inhibiting alkaline phosphatase actvity. Journal of Biological Chemistry, 282, 15872-15883.
Lizotte, P., Hanford, LE., Enghild, J. J., Nozik-Grayck, E., Giles, BL. & Oury, TD. (2007). Developmental expression of the receptor for advanced glycation end-products (RAGE) and its response to hyperoxia in the neonatal rat lung. BMC Developmental Biology, 7(15).
Britz, D. & Strutwolf, J. (2007). Comparison of flux approximations in electrochemical digital simulation. Journal of Electroanalytical Chemistry, 602, 210-216.
Schramm, A., Revsbech, N. P., Dalsgaard, T., Piña-Ochoa, E., de la Torré, J. R., Stahl, D. A. & Risgaard-Petersen, N. (2006). Activity, Microenvironments, and Community Structure of Aerobic and Anaerobic Ammonium Oxidizing Prokaryotes in Estuarine Sediment (Randers Fjord, DK). In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 482). International Society for Microbial Ecology.
Stief, P., Nielsen, L. P., Revsbech, N. P. & Schramm, A. (2006). From the Gut of an Insect to the Global Climate: Denitrification and Nitrous Oxide Production inside Lake Chironomidae. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 171). International Society for Microbial Ecology.
Krieger, B., Schwermer, C. U., Rezakhani, N., Horn, M. A., Gieseke, A., Cytryn, E., Dror, M., van Rijn, J., Drake, H. L. & Schramm, A. (2006). Diversity of Nitrate-Reducing and Denitrifying Bacteria in a Marine Aquaculture Biofilter and their Response to Sulfide. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 270). International Society for Microbial Ecology.
Abildgaard, L., Engberg, R. M., Schramm, A. & Højberg, O. (2006). Quantitative Detection of Clostridium perfringens in Broiler Chickens by Real-Time PCR Targeting the Alpha-Toxin Gene. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 441). International Society for Microbial Ecology.
Schwermer, C. U., Krieger, B., Lavik, G., Schramm, A., van Rijn, J., de Beer, D., Minz, D., Cyctryn, E., Kuypers, M. M. M. & Gieseke, A. (2006). Impact of Sulfide on Nitrate Conversion in Eutrophic Nitrate-Rich Marine Sludge. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 266). International Society for Microbial Ecology.
Kofoed, M. V., Stief, P., Poulsen, M. & Schramm, A. (2007). In situ detection of denitrifying bacteria by mRNA-targeted nucleic acid probes and catalyzed reporter deposition. Poster session presented at Annual Conference of the Association for General and Applied Microbiology (VAAM), Osnabrück, Germany.
Herrmann, M. & Schramm, A. (2007). Ammonia-oxidizing Bacteria and Archaea in the Rhizosphere of Freshwater Macrophytes. In Biospektrum. Proceedings of the VAAM Annual Meeting (Vol. Special Issue, pp. 60). Pergamon Press.
Nielsen, J. L., Schramm, A., Bernhard, A. E., van den Engh, G. J. & Stahl, D. A. (2004). Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Applied and Environmental Microbiology, 70(12), 7550–7554. https://doi.org/10.1128/AEM.70.12.7550-7554.2004
Arentoft, T., De Ridder, J., Grundahl, F., Glowienka, L., Waelkens, C., Dupret, M.-A., Grigahcne, A., Lefever, K., Jensen, H. R., Reyniers, M., Frandsen, S. & Kjeldsen, H. (2007). Oscillating blue stragglers, γ Doradus stars and eclipsing binaries in the open cluster NGC 2506. Astronomy & Astrophysics (A&A), 465, 965-979.
Duelund, L., Hazell, A. C. & Toftlund, H. (2007). (1,1,1-Tris{[N-(2-pyridylmethyl)-N-methylamino]-methyl}ethane-κ6N)manganese(II) bis(perchlorate). Acta Crystallographica Section E: Structure Reports Online, 63, 1177-1178.
Nielsen, K. H. (2006). Naturvidenskabernes kanonisering: Forskere, erkendelser eller kulturarv. Nordisk Museologi/The Journal Nordic Museology , (2), 27-44.

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Gustafsson, M., Pepper, AS.-R., Albert, V. A. & Källersjö, M. (2001). Molecular phylogeny of the Barnadesioideae (Asteraceae). Nordic Journal of Botany, 21(2), 149-160.
Barling, J., Arnold, G. L. & Anbar, A. D. (2001). Natural mass-dependent variations in the isotopic composition of molybdenum. Earth and Planetary Science Letters, 193.
Revsbech, N. P., Andersen, K. & Nielsen, M. (2001). Nitrogen transformations in wastewater studied by the use of microscale biosensors for nitrite and nitrite nitrate. In Abstracts 9th International Symposium on Microbial Ecology (pp. 182)
Schippers, A. & Jørgensen, BB. (2001). Oxidation of pyrite and iron sulfide by manganese dioxide in marine sediments. Geochimica et Cosmochimica Acta, 65(6), 915-922.
Frische, S., Bruno, S., Fago, A., Weber, R. E. & Mozzarelli, A. (2001). Oxygen binding by single red blood cells from the red-eared turtle Trachemys scripta. Journal of Applied Physiology, 90(5), 1679-84.
Laima, M., Christiansen, C., Emeis, K. & Lund-Hansen, L. C. (2001). Phosphorus transport studies in a coast to basin transect in the SW Baltic Sea. Poster session presented at The Sixth Marine Geological Conference, Hirtshals, Denmark.
Nielsen, I. (2001). Professor, Dr. H.C. Kai Larsen 75. Nordic Journal of Botany, 21(2), 113-114.
Larsen, K. (2001). Progress in the study of Zingiberaceae for Flora Malesiana. In Proceedings of the Fourth International Flora Malesiana Symposium 1998 (pp. 143-147)
Kjeldsen, K. K., Joulian, C. & Ingvorsen, K. (2001). Recovery of sulfate reduction and survival of sulfate reducing bacteria upon oxygen exposure in activated sludge. In Abstracts. 9th International Symposium on Microbial Ecology (ISME-9). Interactions in the microbial world (pp. 382)
Balslev, H. (2001). Review. Nordic Journal of Botany, 21(4).
de Wit, R., Stal, L. J., Lomstein, B. A., Herbert, R. A., van Gemerden, H., Viaroli, P., Cecherelli, V.-U., Rodrigues-Valera, F., Bartoli, M., Giordani, G., Azzoni, R., Schaub, B., Welsh, T. D., Donelly, A., Cifuentes, A., Antón, J., Finster, K., Nielsen, L. B., Pedersen, A.-GU. ... Heijs, S. K. (2001). ROBUST: The ROle of BUffering capacities in STabilising Coastal lagoon ecosystems. Continental Shelf Research, 21, 2021-2041. http://www.elsevier.com/locate/csr
Jørgensen, BB., Weber, A. & Zopfi, J. (2001). Sulfate reduction and anaerobic methane oxidation in Black Sea sediments. Deep-Sea Research Part I: Oceanographic Research Papers, 48(9), 2097-2120.
Weber, A., Riess, W., Wenzhoefer, F. & Jørgensen, BB. (2001). Sulfate reduction in Black Sea sediments: in situ and laboratory radiotracer measurements from the shelf to 2000m depth. Deep-Sea Research Part I: Oceanographic Research Papers, 48(9), 2073-2096.
Nielsen, L. B., Finster, K., Welsh, D. T., Donelly, A., Herbert, R. A., de Wit, R. & Lomstein, B. A. (2001). Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina maritima meadows. Environmental Microbiology, 3(1), 63-71.
Merrison, J. P., Field, D., Finster, K., Lomstein, B. A., Nørnberg, P., Ramsing, N. B. & Uggerhøj, E. (2001). The Mars Simulation Laboratory, University of Aarhus. (pp. 371-374).
Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 4. - 1792: the genera Pholas and Teredo. Phuket Marine Biological Center. Special Publications, 25(2), 557-570.
Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 6. - 1794: the genus Solen. Phuket Marine Biological Center. Special Publications, 25(2), 585-597.
Hylleberg, J. & Knudsen, J. (2001). Translations into English of Lorenz Spengler’s papers on bivalves (1783-1792). Part 7. - 1798: the genus Tellina. Phuket Marine Biological Center. Special Publications, 25(2), 599-621.
Balslev, H. & Jaramillo, T. (2001). Two new Myristicaceae from Ecuador. Nordic Journal of Botany, 21, 561-566.
Balslev, H. (2001). Vascular plants on Volcán Chiles and Páramo del Angel, Ecuador — a preliminary list. In in P. M. Ramsay (ed.) The Ecology of Volcán Chiles: high-altitude ecosystems of the Ecuador-Colombia border. Pebble & Shell, Plymouth (pp. 1-25)
Gregersen, P. & Brix, H. (2001). Zero-discharge of nutrients and water in a willow dominated constructed wetland. Water Science & Technology, 44(11-12), 407-412.
Geithner, W., Hilligsøe, K. M., Kappertz, S., Katko, G., Keim, M., Kloos, S., Kotrotsios, G., Lievens, P., Marinova, K., Neugart, R., Vermeeren, L. & Wilbert, S. (2000). Accurate isotope shift measurements on short-lived neon isotopes. Hyperfine Interactions, 127(1-4), 117-120. https://doi.org/10.1023/A:1012614827735