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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Petersen, M. G., Ludvigsen, M., Grønbæk, K. & Nielsen, K. R. (2007). Designing for Co-located Social Media Use in the Home - Using the CASOME Infrastructure. In A. Venkatesh, T. Gonsalves, A. Monk & K. Buckner (Eds.), Home Informatics and Telematics: ICT for the Next Billion (pp. 251-267). Springer. https://doi.org/10.1007/978-0-387-73697-6_19
Møller, H. H., Dahl, M. R. & Grønbæk, K. (2007). EKGAR: Augmented Reality Support for Learning of Electrocardiography (ECG) Analysis. In Proceedings of World Conference on Educational Multimedia, Hypermedia and Telecommunications 2007 Association for the Advancement of Computing in Education.
Grønbæk, K. (2006, Sept 5). It og læring i bevægelse. EMU - Danmarks Læringsportal.
Mendling, J., Lassen, K. B. & Zdun, U. (2006). Experiences in enhancing existing BPM Tools with BPEL Import and Export. In Proceedings of the 4th International Conference Business Process Management: LNCS (Vol. 4102, pp. 348-357). Springer.
Westergaard, M. & Lassen, K. B. (2006). The BRITNeY Suite Animation Tool. In Petri Nets and Other Models of Concurrency ICATPN 2006 (Vol. 4024, pp. 331-340). Springer.
Lassen, K. B. (2006). Translating BPEL to FLOWer. (pp. 1-24). Aarhus Universitetsforlag.
Lassen, K. B. & Westergaard, M. (2006). Embedding Java Types in CPN Tools: Technical Report. http://www.daimi.au.dk/~krell/download.php?file=Embedding Java Types in CPN Tools.pdf.
Thomsen, K. & Manuilov, V. (2006). The group of unital C*-extensions. In B. Bojarski, A. Mishchenko & A. Weber (Eds.), C*-algebras and Elliptic Theory (pp. 151-156). Birkhäuser Verlag.
Lassen, K. B., van Dongen, B. & van der Aalst, W. M. P. (2007). Translating Message Sequence Charts to other Process Languages using Process Mining. (207 ed.) (pp. 1-15). Eindhoven Technical University.
Kramp, G., Kristensen, M. & Pedersen, J. F. (2007). Physical and Digital Design of the BlueBio Biomonitoring System Prototype, to be used in Emergency Medical Response. In Proceedings on 1st International Conference on Pervasive Computing Technologies for Healthcare 2006 IEEE.
Fukuda, K., Jensen, A. N., Lauritzen, N. & Thomas, R. (2007). The generic Gröbner walk. Journal of Symbolic Computation, 42, 298-312. https://doi.org/10.1016/j.jsc.2006.09.004
Nielsen, M. & Krukow, K. (2007). Trust Structures. International Journal of Information Security, 6(2-3), 153-181.
Nielsen, M., Krukow, K. & Sassone, V. (2007). A Bayesian Model for Event-based Trust. Electronic Notes in Theoretical Computer Science, 172, 499-521. https://doi.org/10.1016/j.entcs.2007.02.017
Addison, W. N., Azari, F., Sørensen, E. S., Kaartinen, M. T. & McKee, M. D. (2007). Pyrophosphate inhibits mineralization of osteoblast cultures by binding to mineral, upregulating osteopontin and inhibiting alkaline phosphatase actvity. Journal of Biological Chemistry, 282, 15872-15883.
Lizotte, P., Hanford, LE., Enghild, J. J., Nozik-Grayck, E., Giles, BL. & Oury, TD. (2007). Developmental expression of the receptor for advanced glycation end-products (RAGE) and its response to hyperoxia in the neonatal rat lung. BMC Developmental Biology, 7(15).
Britz, D. & Strutwolf, J. (2007). Comparison of flux approximations in electrochemical digital simulation. Journal of Electroanalytical Chemistry, 602, 210-216.
Schramm, A., Revsbech, N. P., Dalsgaard, T., Piña-Ochoa, E., de la Torré, J. R., Stahl, D. A. & Risgaard-Petersen, N. (2006). Activity, Microenvironments, and Community Structure of Aerobic and Anaerobic Ammonium Oxidizing Prokaryotes in Estuarine Sediment (Randers Fjord, DK). In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 482). International Society for Microbial Ecology.
Stief, P., Nielsen, L. P., Revsbech, N. P. & Schramm, A. (2006). From the Gut of an Insect to the Global Climate: Denitrification and Nitrous Oxide Production inside Lake Chironomidae. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 171). International Society for Microbial Ecology.
Krieger, B., Schwermer, C. U., Rezakhani, N., Horn, M. A., Gieseke, A., Cytryn, E., Dror, M., van Rijn, J., Drake, H. L. & Schramm, A. (2006). Diversity of Nitrate-Reducing and Denitrifying Bacteria in a Marine Aquaculture Biofilter and their Response to Sulfide. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 270). International Society for Microbial Ecology.
Abildgaard, L., Engberg, R. M., Schramm, A. & Højberg, O. (2006). Quantitative Detection of Clostridium perfringens in Broiler Chickens by Real-Time PCR Targeting the Alpha-Toxin Gene. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 441). International Society for Microbial Ecology.
Schwermer, C. U., Krieger, B., Lavik, G., Schramm, A., van Rijn, J., de Beer, D., Minz, D., Cyctryn, E., Kuypers, M. M. M. & Gieseke, A. (2006). Impact of Sulfide on Nitrate Conversion in Eutrophic Nitrate-Rich Marine Sludge. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 266). International Society for Microbial Ecology.
Kofoed, M. V., Stief, P., Poulsen, M. & Schramm, A. (2007). In situ detection of denitrifying bacteria by mRNA-targeted nucleic acid probes and catalyzed reporter deposition. Poster session presented at Annual Conference of the Association for General and Applied Microbiology (VAAM), Osnabrück, Germany.
Herrmann, M. & Schramm, A. (2007). Ammonia-oxidizing Bacteria and Archaea in the Rhizosphere of Freshwater Macrophytes. In Biospektrum. Proceedings of the VAAM Annual Meeting (Vol. Special Issue, pp. 60). Pergamon Press.
Nielsen, J. L., Schramm, A., Bernhard, A. E., van den Engh, G. J. & Stahl, D. A. (2004). Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Appl.  Environ. Microbiol., 70(12), 7550–7554. https://doi.org/10.1128/AEM.70.12.7550-7554.2004
Arentoft, T., De Ridder, J., Grundahl, F., Glowienka, L., Waelkens, C., Dupret, M.-A., Grigahcne, A., Lefever, K., Jensen, H. R., Reyniers, M., Frandsen, S. & Kjeldsen, H. (2007). Oscillating blue stragglers, γ Doradus stars and eclipsing binaries in the open cluster NGC 2506. Astronomy & Astrophysics (A&A), 465, 965-979.
Duelund, L., Hazell, A. C. & Toftlund, H. (2007). (1,1,1-Tris{[N-(2-pyridylmethyl)-N-methylamino]-methyl}ethane-κ6N)manganese(II) bis(perchlorate). Acta Crystallographica Section E: Crystallographic Communications, 63, 1177-1178.
Nielsen, K. H. (2006). Naturvidenskabernes kanonisering: Forskere, erkendelser eller kulturarv. Nordisk Museologi/The Journal Nordic Museology , (2), 27-44.

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Christiansen, F. B. & Prout, T. (2000). Aspects of fitness. In R. S. Singh & C. B. Krimbas (Eds.), Evolutionary Genetics from Molecules to Morphology (pp. 146–156). Cambridge University Press.
Svenstrup, M. & Christiansen, F. B. (2000). Biker’s Dilemma: Cooperation between Foes. Selection, Vol. 1, 147–152.
Hylleberg, J. (2000). Biodiversity Estimated over Time. In Kasetsart University. Dept. of Marine Sciences. Faculty of Fisheries. (pp. 1-3). Kasetsart University. Dept. of Marine Sciences. Faculty of Fisheries.
Dupont, Y. & Skov, C. (2000). Blomster og bier på De Kanariske Øer. Naturens Verden, 9, 2-15.
Barfod, A. S. (2000). Book review. Nordic Journal of Botany, 20(2), 300.
Barfod, A. S. (2000). Book review. Nordic Journal of Botany, 20(2), 220.
Baatrup, E., Bayley, M., Sørensen, F. F. & Toft, G. (2000). Can animal behaviour predict population level effects ? In Forecasting the Environmental Fate and Effects of Chemicals (pp. 139-150). John Wiley.
Ravenschlag, K., Sahm, K., Knoblauch, C., Jørgensen, BB. & Amann, R. (2000). Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine Arctic sediments. Applied and Environmental Microbiology, 66(8), 3592-3602.
Lefranc, A. & Bundgaard, J. (2000). Controlled variation of body size by larval crowding in Drosophila melanogaster. Drosophila Information Service, 83, 171-174.
Cedhagen, T., Hansson, H. G., Hendelberg, J., Kautskt, H., Lundälv, T., Smith, S., Tunberg, B. & Warén, A. (2000). Crustacea. In U. Gärdenfors (Ed.), Red List of Swedish Species (pp. 299-305). ArtDatabanken, Sveriges Lantbruksuniversitet.
Bijlsma, R., Bundgaard, J. & Boerema, A. C. (2000). Does inbreeding affect the extinction risk of small populations?: Predictions from Drosophila. Journal of Evolutionary Biology, 13, 502-514.
Cedhagen, T. (2000). Echinodermata. In U. Gärdenfors (Ed.), Red List of Swedish Species (pp. 317-320). ArtDatabanken, Sveriges Lantbruksuniversitet.
Cizkova, H., Brix, H. & Herben, T. (2000). Ecology of Phragmites populations in the changing landscape. Folia Geobotanica, 35, 35.
Macía, M. J. & Barfod, A. S. (2000). Economic botany of Spondias purpurea L. in Ecuador. Economic Botany, 54(4), 449-458.
Olesen, J. M. (2000). Exactly how generalised are pollination interactions? In Totland, Ø., Armbruster, W. S., Fenster, C., Molau, U., Nilsson, L. A., Olesen, J. M., Ollerton, J., Philipp, M. & Ågren, J. 2000 (eds). The Scandinavian Association for Pollination Ecology honours Knut Fægri. (pp. 161-178). The Norwegian Academy of Science and Letters.
Mouritsen, K. N. & Bay, G. (2000). Fouling of gastropods: a role for parasites? Hydrobiologia, 418, 243-246.
Dalsgaard, B. (2000). Frivillig i det Skotske højland. Fugle og Natur, 20(3), 22-23.
Hourdez, S., Lallier, F. H., De Cian, M. C., Green, B. N., Weber, R. E. & Toulmond, A. (2000). Gas transfer system in Alvinella pompejana (Annelida polychaeta, Terebellida): functional properties of intracellular and extracellular hemoglobins. Physiological and Biochemical Zoology, 73(3), 365-73. https://doi.org/10.1086/316755
Hylleberg, J. (2000). General Conclusions Regarding the 10th TMMP Congress and Workshop. Phuket Marine Biological Center. Special Publications, 21(1), 1-14.
Feldman, M. W., Otto, S. P. & Christiansen, F. B. (2000). Genes, Culture and Inequality. In K. Arrow, S. Bowles & S. Durlauf (Eds.), Meritocracy and Economic Inequality (pp. 61–85). Princeton University Press.
Jørgensen, T. H. & Olesen, J. M. (2000). Growth rules based on the modularity of the Canarian Aeonium (Crassulaceae) and their phylogenetic value. Botanical Journal of the Linnean Society, 132, 223-240.
Hourdez, S., Lamontagne, J., Petersen, P., Weber, R. E. & Fisher, C. R. (2000). Hemoglobin from a deep-sea hydrothermal vent copepod. Biological Bulletin, 199, 95-99.
Christiansen, C., Lund-Hansen, L. C., Bendtsen, S. V., Nielsen, K. L., Flindt, M. & Runge, E. (2000). Hydrografiens betydning for transport og omsætning af næringssalte. In Havmiljøet ved årtusindskiftet (Ed.) Bente Lomstein (pp. 144-156). Olsen&Olsen.
Lindberg, A. B., Knudsen, J. T. & Olesen, J. M. (2000).  Independence of floral morphology and scent chemistry as trait groups in a set of Passiflora species. In Totland, Ø., Armbruster, W. S., Fenster, C., Molau, U., Nilsson, L. A., Olesen, J. M., Ollerton, J., Philipp, M. & Ågren, J. 2000 (eds). The Scandinavian Association for Pollination Ecology honours Knut Fægri. (pp. 91-111). The Norwegian Academy of Science and Letters.
Holmstrup, M., Bayley, M., Sjursen, H., Højer, R. & Friis, K. (2000). Interactions between climatic stress tolerance of soil invertebrates and toxic compounds in the environment. CryoLetters, 21, 309-314.
Weber, R. E., Fago, A., Val, A. L., Bang, A., Van Hauwaert, M. L., Dewilde, S., Zal, F. & Moens, L. (2000). Isohemoglobin differentiation in the bimodal-breathing amazon catfish Hoplosternum littorale. Journal of Biological Chemistry, 275(23), 17297-305. https://doi.org/10.1074/jbc.M001209200
Hylleberg, J. (2000). Joyce Dangebun in Memoriam. Phuket Marine Biological Center. Special Publications, 21(3), ii.
Das, T. K., Weber, R. E., Dewilde, S., Wittenberg, J. B., Wittenberg, B. A., Yamauchi, K., Van Hauwaert, M. L., Moens, L. & Rousseau, D. L. (2000). Ligand binding in the ferric and ferrous states of Paramecium hemoglobin. Biochemistry, 39(46), 14330-40.
Riis, T. & Sand-Jensen, K. (2000). Macrophyte decline in Danish lakes and streams over the past 100 years.  . Journal of Ecology, 88, 1030-1040.
Rysgaard, S., Christensen, P. B., Sørensen, M. V., Funch, P. & Berg, P. (2000). Marine meiofauna, carbon and nitrogen mineralization in sandy and soft sediments of Disko Bay, West Greenland. Aquatic Microbial Ecology, 21(1), 59-71.
Liesack, W., Schnell, S. & Revsbech, N. P. (2000). Microbiology of flooded rice paddies. FEMS Microbiology Reviews, 24(5), 625-645. https://doi.org/10.1016/S0168-6445(00)00050-4