Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Boudol, G., Castellani, I., Hennessy, M., Nielsen, M. & Winskel, G. (2008). Twenty Years on: Reflections on the CEDISYS Project: Combining True Concurrency with Process Algebra. Lecture Notes in Computer Science, 5065, 757-777. https://doi.org/10.1007/978-3-540-68679-8_47

Bendixen, C. (1999). Identifikation af gener af betydning for sundhed og produktion hos kvæg. In DJF Intern rapport: Metoder og planlægning i kvægavlen (Vol. 116, pp. 7-14)

Bendixen, C. (1997). Genernes opbygning, kortlægning og funktion. In Intern Rapport (Vol. 92, pp. 3-9)

Andersen, A. H., Bendixen, C. & Westergaard, O. (1996). DNA Topoisomerases. Review in DNA replication Eukaryotic Cells, 31, 587-617.

Thomsen, B. (1997). Metoder til identifikation af gener og genetisk variation på DNA niveau. In Intern Rapport 92 (pp. 10-17)

Marchand, A., Winther, A.-M. L., Holm, P., Olesen, C., Montigny, C., Arnou, B., Champeil, P., Clausen, J. D., Vilsen, B., Andersen, J. P., Nissen, P., Jaxel, C., Møller, J. V. & le Maire, M. (2008). Crystal Structure of D351A and P312A Mutant Forms of the Mammalian Sarcoplasmic Reticulum Ca²⁺-ATPase Reveals Key Events in Phosphorylation and Ca²⁺ Release. Journal of Biological Chemistry, 283(21), 14867-14882.

Larsen, K. & Hansen, O. D. (2002). Transgenic plants in medicine. In DIAS Annual report 2001 (pp. 37)

Bernigaud, V., Drenck, K., Huber, B., Hvelplund, P., Jabot, T., Kadhane, U., Kirketerp, M.-B. S., Liu, B., Lykkegaard, M. K., Manil, B. & Nielsen, S. B. (2008). Electron-Capture-Induced Dissociation of Protoporphyrin IX Ions. Journal of The American Society for Mass Spectrometry, 809-813.

Silkin, V. M., Pitarke, J. M., Chulkov, E. V., Diaconescu, B., Pohl, K., Vattuone, L., Savio, L., Hofmann, P., Farías, D., Rocca, M. & Echenique, P. M. (2008). Band structure effects on the Be(0001) acoustic surface plasmon energy dispersion. Physica Status Solidi. A: Applications and Materials Science (Online), 1307-1311.

Wells, J., Kallehauge, J. & Hofmann, P. (2008). Surface-sensitive conductance measurements on clean and stepped semiconductor surfaces: Numerical simulations of four point probe measurements. Surface Science, 602, 1742-1749.

Apyan, A., Avakian, R. O., Badelek, B., Ballestrero, S., Biino, C., Birol, I., Cenci, P., Connell, S. H., Eichblatt, S., Fonseca, T., Freund, A., Gorini, B., Groess, R., Ispirian, K., Ketel, T. J., Kononets, Y. V., Lopez, A., Mangiarotti, A., van Rens, B. ... Wessely, O. (2008). Coherent bremsstrahlung, coherent pair production, birefringence, and polarimetry in the 20-170 GeV energy range using aligned crystals. Physical Review Accelerators and Beams, 11, 041001.

Kristensen, K. (2001). Methods for testing uniformity when using characters based on bulk sampling: TWC/19/7. Paper presented at UPOV, Geneva, Switzerland.

Kristensen, K. (1999). Efficiency of incomplete block designs in Spring Rape and Yellow Mustard. In TWC/17/8

Gilbert, M. T. P., Kivisild, T., Grønnow, B., Andersen, P. K., Metspalu, E., Reidla, M., Tamm, E., Axelsson, E., Götherström, A., Campos, P. F., Rasmussen, M., Metspalu, M., Higham, T. F. G., Schwenninger, J.-L., Nathan, R., De Hoog, C.-J., Koch, A., Møller, L. N., Andreasen, C. ... Willerslev, E. (2008). Paleo-Eskimo mtDNA Genome Reveals Matrilineal Discontinuity in Greenland. Science, 320(5884), 1787-1789. https://doi.org/10.1126/science.1159750

Kristiansen, T., Overgaard, A., Bjorholm, S. W., Svenning, J.-C. & Balslev, H. (2008). Palm diversity, Data collection & fieldwork, Why do we work with palms?. Poster session presented at EUNOPS møde - poster session, Merano, Italy.

Overgaard, A. & Svenning, J.-C. (2008). Palms in northern Europe by 2100?. Poster session presented at EUNOPS møde - poster session, Merano, Italy.

Kristiansen, T., Svenning, J.-C., Overgaard, A., Bjorholm, S. W. & Balslev, H. (2008). Palms and temperature. Poster session presented at EUNOPS møde - poster session, Merano, Italy.

Kristiansen, T., Svenning, J.-C., Overgaard, A., Bjorholm, S. W. & Balslev, H. (2008). Palms and water. Poster session presented at EUNOPS møde - poster session, Merano, Italy.

Ziolkowski, M., Weijo, V., Jørgensen, P. & Olsen, J. (2008). An efficient algorithm for solving nonlinear equations with a minimal number of trial vectors: Applications to atomic-orbital based coupled-cluster theory. Journal of Chemical Physics, 128, 204105.

Rattan, S. (2008). Principles and practice of hormetic treatment of aging and age-related diseases. Human & Experimental Toxicology, 27(2), 151-154.

Nielsen, M. M., Sørensen, J. G., Kruhøffer, M., Justesen, J. & Loeschcke, V. (2006). Phototransduction genes are up-regulated in a global gene expression study of Drosophila melanogaster selected for heat resistance. Cell Stress & Chaperones, 11(4), 325-333. https://doi.org/10.1379/CSC-207.1.

Jensen, L. T., Nielsen, M. M. & Loeschcke, V. (2008). New candidate genes for heat resistance in Drosophila melanogaster are regulated by HSF. Cell Stress & Chaperones, 13(2), 177-182. https://doi.org/10.1007/s12192-008-0020-x

Bjerring, M., Nielsen, J. S., Siu, A., Nielsen, N. C. & Krebs, F. C. (2008). An explanation for the high stability of polycarboxythiophenes in photovoltaic devices - A by solid-state NMR dipolar recoupling study. Solar Energy Materials & Solar Cells, 92, 772-784. https://doi.org/10.1016/j.solmat.2007.11.008

Nielsen, S. L., Bång, H., Kotkas, K., Kristensen, K., Palohuhta, J. P., Rosenberg, V. & Tolstrup, K. (2007). Variation of Growth and Disease Characters Between Clones of Potato (Solanum tuberosum L.). Potato Research, 50(2), 97-114. https://doi.org/10.1007/s11540-007-9032-7

Simonsen, V., Laskowski, R., Bayley, M. & Holmstrup, M. (2008). Low impact of metal pollution on genetic variation in the earthworm Dendrobaena octaedra measured by allozymes. Pedobiologia, 52(1), 51-60. https://doi.org/10.1016/j.pedobi.2008.02.003

Arge, L., Mølhave, T. & Zeh, N. (2008). Cache-Oblivious Red-Blue Line Segment Intersection. Lecture Notes in Computer Science, 78-87. https://doi.org/10.1007/978-3-540-87744-8_8

Sørensen, H. K. (2008). Matematikhistorie som mål eller middel? Matematikhistorie til brug i gymnasiets matematikundervisning: Kommentar til de to artikler af Uffe T. Jankvist "Den matematikhistoriske dimension i undervisning - generelt set" i MONA, 2007(3), og "Den matematikhistoriske dimension i undervisning - gymnasialt set" i MONA, 2008(1). MONA: Matematik og Naturfagsdidaktik, (2), 83-86.

Kock, S. A., Nygaard, J. V., Eldrup, N., Fründ, E.-T., Klærke, A., Paaske, W. P., Falk, E. & Yong Kim, W. (2008). Mechanical stresses in carotid plaques using MRI-based fluid-structure interaction models. Journal of Biomechanics, 41(8), 1651-1658. https://doi.org/10.1016/j.jbiomech.2008.03.019

Knudsen, H. (2008). Poul Brandt Rehberg: Samplings fra et liv i videnskab og politik. Carlsbergfondet. Aarsskrift, 36-41.

Jacobsen, M. F., Clo, E., Mokhir, A. & Gothelf, K. V. (2007). Model Systems for Activation of Nucleic Acid Encoded Prodrugs. ChemMedChem, 2, 793-799.

Chen, M. & Gothelf, K. V. (2008). Labeling of DNA via rearrangement of S-2-aminoethyl phosphorothioates to N-(2-mercaptoethyl)phosphoramidates. Organic & Biomolecular Chemistry, 6, 908-911.

Andersen, C. S., Yan, H. & Gothelf, K. V. (2008). Bridging One Helical Turn in dsDNA by Templated Dimerization of Molecular Rods. Angewandte Chemie International Edition, 47, 5569-5572.

Sharma, J., Chhabra, R., Andersen, C. S., Gothelf, K. V., Yan, H. & Liu, Y. (2008). Toward Reliable Gold Nanoparticle Patterning On Self-Assembled DNA Nanoscaffold. Journal of the American Chemical Society, 130, 7820-7821.

Wendt, S., Sprunger, P., Lira, E., Madsen, G. K. H., Li, Z., Hansen, J. Ø., Matthiesen, J., Blekinge-Rasmussen, A., Lægsgaard, E., Hammer, B. & Besenbacher, F. (2008). The Role of Interstitial Sites in the Ti3d Defect State in the Band Gap of Titania. Science, 320, 1755-1759. https://doi.org/10.1126/science.1159846

Weigelt, S., Busse, C. W., Bombis, C., Knudsen, M. M., Gothelf, K. V., Lægsgaard, E., Besenbacher, F. & Linderoth, T. R. (2008). Surface synthesis of 2D branched polymer nanostructures. Angewandte Chemie International Edition, 47, 4406-4410.

Weigelt, S., Schnadt, J., Tuxen, A. K., Masini, F., Bombis, C., Busse, C. W., Isvoranu, C., Ataman, E., Lægsgaard, E., Besenbacher, F. & Linderoth, T. R. (2008). Formation of Trioctylamine from Octylamine On Au(111). Journal of the American Chemical Society, 130, 5388.

Hemmersam, A. G., Rechendorf, K., Besenbacher, F., Kasemo, B. & Sutherland, D. (2008). pH dependent adsorption and conformational change of ferritin studied on metal oxide surfaces by a combination of QCM-D and AFM. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 112, 4180-4186. https://doi.org/10.1021/jp072413t

Hemmersam, A. G., Rechendorf, K., Foss, M., Sutherland, D. & Besenbacher, F. (2008). Fibronectin adsorption on gold, Ti and Ta-oxide investigated by QCM-D and RSA modelling. Journal of Colloid and Interface Science, 320, 110-116. https://doi.org/10.1016/j.jcis.2007.11.047

Pfeiffer, I., Seantier, S., Petronis, S., Sutherland, D., Kasemo, B. & Zäch, M. (2008). Influence of nanotopography on phospholipid bilayer formation on silicon dioxide. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 112(16), 5175-5181.

Ravnshøj, C. R. (2008). Generators for the l-torsion subgroup of Jacobians of Genus Two Curves. Lecture Notes in Computer Science, 225-242. https://doi.org/10.1007/978-3-540-85538-5_16

Hao, F., Ali, T., Sutherland, D., Nordlander, P. & Larsson, E. M. (2008). Shedding light on dark plasmons in gold nanorings. Chemical Physics Letters, (458), 262-266.

Christensen, S. & Doherty, J. (2008). Predictive error dependencies when using pilot points and singular value decomposition in groundwater model calibration. Advances in Water Resources, 31(4), 674-700.

Jeppesen, J., Christensen, S. & Ladekarl, U. L. (2008). Conceptual model for simulating the water cycle of the Copenhagen area, Denmark. In E. Poeter, M. Hill & C. Zheng (Eds.), MODFLOW and More 2008: Ground Water and Public Policy - Conference Proceedings (pp. 120-124). INTERNATIONAL GROUND WATER MODELING CENTER (IGWMC).

Poulsen, S. E., Christensen, S., Rasmussen, K. R., Mortensen, J. S. & Viezzoli, A. (2008). An Investigation of Groundwater Flow on a Coastal Barrier using Multi Electrode Profiling. In SWIM - 20th Salt Water Intrusion Meeting, Program and Proceedings (pp. 209-212)

Jeppesen, J., Christensen, S. & Ladekarl, U. L. (2008). Simulation of the historical development of the water cycle of the Copenhagen area, Denmark: Abstract Number EGU2008-A-05371. Abstract from European Geosciences Union General Assembly 2008, Wien, Austria.

Heckmann, L.-H., Hovgaard, M. B., Besenbacher, F. & Scott-Fordsmand, J. J. (2008). Toxicity of seven different nanoparticles to Eisenia fetida. Poster session presented at SETAC Europe 18th Annual Meeting. World under stress: scientific and applied issues, Warsaw, Poland.

Baattrup-Pedersen, A., Springe, G., Riis, T., Larsen, S. E., Sand-Jensen, K. & Kjellerup Larsen, L. M. (2008). The search for reference conditions for stream vegetation in northern Europe. Freshwater Biology, 53(9), 1890-1901. https://doi.org/10.1111/j.1365-2427.2008.02003.x

Nielsen, A. E. B. & Mølmer, K. (2008). Atomic spin squeezing in an optical cavity. Physical Review A, 77(063811). https://doi.org/10.1103/PhysRevA.77.063811

Larsen, M. G. G., Salskov, K. B., Henriksen, P. G. & Baatrup, E. (2008). Male zebrafish (Danio rerio) courtship behaviour resists the feminising effects of 17α-ethinyloestradiol - morphological sexual characteristics do not. Aquatic Toxicology, 87, 234-244. https://doi.org/10.1016/j.aquatox.2008.02.003

Svenning, J.-C., Normand, S. & Skov, F. (2008). Postglacial dispersal limitation of widespread forest plant species in nemoral Europe. Ecography, 31, 316-326. https://doi.org/10.1111/j.2008.0906-7590.05206.x

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