Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Calamida, A., Bono, G., Stetson, P. B., Freyhammer, L. M., Cassisi, S., Grundahl, F., Pietrinferni, A., Hilker, M., Primas, F., Richtler, T., Romaniello, M., Buonanno, R., Caputo, F., Catellani, M., Corsi, C. E., Ferraro, I., Iannicola, G. & Pulone, L. (2007). Strömgren photometry of galactic globular clusters. I. New calibrations of the metallicity index. Astrophysical Journal, 670(1), 400-422.

Xu, W., Ross, K. E. A., Otero Martin, R., Schöck, M., Lægsgaard, E., Stensgaard, I., Kontorovich, L. & Besenbacher, F. (2007). Probing the hierachy of thymine-thymine interactions in self-assembled structures by STM manipulation. Small, 3(12), 2011-2014.

Otero Martin, R., Lukas, M., Kelly, R. E. A., Xu, W., Lægsgaard, E., Stensgaard, I., Kantorovich, L. N. & Besenbacher, F. (2008). Elementary structural motifs in a random network of cytosine adsorbed on a gold (111) surface. Science, 319, 312-315. https://doi.org/10.1126/science.1150532

Nielsen, K. H. & Valásek, L. (2007). In vivo deletion analysis of the architecture of a multiprotein complex of translation initiation factors. Methods in Enzymology, 431, 15-32. https://doi.org/10.1016/S0076-6879(07)31002-1

Valásek, L., Szamecz, B., Hinnebusch, A. G. & Nielsen, K. H. (2007). In vivo stabilization of preinitiation complexes by formaldehyde cross-linking. Methods in Enzymology, 429, 163-83. https://doi.org/10.1016/S0076-6879(07)29008-1

Nielsen, K. H., Valásek, L., Sykes, C., Jivotovskaya, A. & Hinnebusch, A. G. (2006). Interaction of the RNP1 motif in PRT1 with HCR1 promotes 40S binding of eukaryotic initiation factor 3 in yeast. Molecular and Cellular Biology, 26(8), 2984-98. https://doi.org/10.1128/MCB.26.8.2984-2998.2006

Jivotovskaya, A. V., Valásek, L., Hinnebusch, A. G. & Nielsen, K. H. (2006). Eukaryotic translation initiation factor 3 (eIF3) and eIF2 can promote mRNA binding to 40S subunits independently of eIF4G in yeast. Molecular and Cellular Biology, 26(4), 1355-72. https://doi.org/10.1128/MCB.26.4.1355-1372.2006

Hinnebusch, A. G., Asano, K., Olsen, D. S., Phan, L., Nielsen, K. H. & Valásek, L. (2005). Study of translational control of eukaryotic gene expression using yeast. New York Academy of Sciences. Annals, 1038, 60-74. https://doi.org/10.1196/annals.1315.012

Nielsen, K. H., Szamecz, B., Valásek, L., Jivotovskaya, A., Shin, B.-S. & Hinnebusch, A. G. (2004). Functions of eIF3 downstream of 48S assembly impact AUG recognition and GCN4 translational control. EMBO Journal, 23(5), 1166-77. https://doi.org/10.1038/sj.emboj.7600116

Valásek, L., Nielsen, K. H. & Hinnebusch, A. G. (2002). Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo. EMBO Journal, 21(21), 5886-98.

Phan, L., Schoenfeld, L. W., Valásek, L., Nielsen, K. H. & Hinnebusch, A. G. (2001). A subcomplex of three eIF3 subunits binds eIF1 and eIF5 and stimulates ribosome binding of mRNA and tRNA(i)Met. EMBO Journal, 20(11), 2954-65. https://doi.org/10.1093/emboj/20.11.2954

Nielsen, K. H., Gredsted, L., Broach, J. R. & Willumsen, B. M. (2001). Sensitivity of wild type and mutant ras alleles to Ras specific exchange factors: Identification of factor specific requirements. Oncogene, 20(17), 2091-100. https://doi.org/10.1038/sj.onc.1204306

Nielsen, K. H., Papageorge, A. G., Vass, W. C., Willumsen, B. M. & Lowy, D. R. (1997). The Ras-specific exchange factors mouse Sos1 (mSos1) and mSos2 are regulated differently: mSos2 contains ubiquitination signals absent in mSos1. Molecular and Cellular Biology, 17(12), 7132-8.

Andersen, C. L., Christensen, L. L., Thorsen, K., Schepeler, T., Sørensen, F. B., Verspaget, H. W., Simon, R., Kruhøffer, M., Aaltonen, L. A., Laurberg, S. & Ørntoft, T. F. (2009). Dysregulation of the transcription factors SOX4, CBFB, and SMARCC1 correlates with outcome of colorectal cancer. British Journal of Cancer.

Calamida, A., Bono, G., Freyhammer, L. M., Grundahl, F., Corsi, C. E., Stetson, P. B., Buonanno, R., Hilker, M. & Richtler, T. (2008). Metallicity distribution of ω Cen Red Giants based on the Strömgren m1 metallicity index. In A. Vazdekis & R. F. Peletier (Eds.), Stellar Populations as Building Blocks of Galaxies, Proceedings of IAU Symposium #241 (pp. 223-226). Cambridge University Press. https://doi.org/10.1017/S1743921307007958

Montalto, M., Piotto, G., Desidera, S., De Marchi, F., Bruntt, H., Stetson, P. B., Arellano Ferro, A., Momany, Y., Gratton, R. G., Poretti, E., Aparicio, A., Barbieri, M., Claudi, R. U., Grundahl, F. & Rosenberg, A. (2007). A new search for planet transits in NGC 6791. Astronomy & Astrophysics (A&A), 470, 1137-1156.

Landolt, A. U., Martinez, P., Bastien, P., Fabrika, S., Gilliland, R., Grundahl, F., Jordi, C. & Munari, U. (2007). Commission 25: Stellar Photometry and Polarimetry. In O. Engvold (Ed.), IAU Transactions, Reports on Astronomy 2002-2005 (Vol. 26A, pp. 307-312). International Astronomical Union.

Valenti, S., Elias-Rosa, N., Taubenberger, S., Stanishev, V., Agnoletto, I., Sauer, D., Cappellaro, E., Pastorello, A., Benetti, S., Riffeser, A., Hopp, U., Navasardyan, H., Tsvetkov, D., Lorenzi, V., Patat, P., Turatto, M., Barbon, R., Ciroi, S., Di Mille, F. ... Mazzali, P. A. (2008). The carbon-rich type Ic SN 2007gr: the photospheric phase. Astrophysical Journal, 673(1), L155-L158.

Yong, D. & Grundahl, F. (2008). An abundance analysis of bright giants in the globular cluster NGC 1851. Astrophysical Journal, 672(1), L29-L32.

Na, T., Gribsholt, B., Galaktionov, OS., Lee, T. & Meysman, FJR. (2008). Influence of advective bio-irrigation on carbon and nitrogen cycling in sandy sediments. Journal of Marine Research, 66, 691-722.

Skivesen, N., Canning, J., Kristensen, M., Martelli, C., Tetu, A. & Frandsen, L. H. (2008). Photonic Crystal Waveguide-based Biosensor. Paper presented at The Optical Fiber Communication Conference, OFC 2008, San Diego, United States.

Canning, J., Kristensen, M., Skivesen, N., Frandsen, L. H., Lavrinenko, A. V., Tetu, A., Chevallier, J. & Martelli, C. (2008). Band Edge Effects in Photonic Crystal Waveguides: Polarisation Conversion. Paper presented at The Optical Fiber Communication Conference, OFC2008, San Diego, United States.

Sonne-Schmidt, C. S., Sanggaard, K. W. & Enghild, J. J. (2007). Separation of oligosaccharides of hyaluronan. In Years of experience in every column (GE Healthcare booklet)

Canning, J., Kristensen, M., Skivesen, N., Martelli, C., Tetu, A., Frandsen, L. & Chevallier, J. (2008). Generation of Ultra Narrow Sensing Filters Using Cross Polarisation in a Linear SOI Photonic Crystal Waveguide. Poster session presented at Optical Fibre Sensors, OFS-19, 2008, Perth, Australia.

Malte, H., Larsen, C., Musyl, M. & Richard, B. (2007). Differential heating and cooling rates in bigeye tuna (Thunnus obesus Lowe):a model of non-steady state heat exchange. Journal of Experimental Biology, 210, 2618-2626.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of a Degenerate Fermi Gas with a Feshbach Resonance. Journal of Low Temperature Physics, 148(3-4), 435-440.

Watabe, S., Nikuni, T., Nygaard, N., Williams, J. E. & Clark, C. W. (2007). Adiabatic Phase Diagram of an Ultracold Atomic Fermi Gas with a Feshbach Resonance. Journal of the Physical Society of Japan, 76(064003).

Riis, T., Madsen, T. V. & Sennels, R. S. H. (2009). Regeneration and growth rates of allofragments in four common stream plants. Aquatic Botany, (90), 209-212. https://doi.org/10.1016/j.aquabot.2008.08.005

Offersen, B. V., Pfeiffer, P., Andreasen, P. & Overgaard, J. (2007). Urokinase plasminogen activator and plasminogen activator inhibitor type-1 in nonsmall-cell lung cancer: relation to prognosis and angiogenesis. Lung Cancer, 56(1), 43-50. https://doi.org/10.1016/j.lungcan.2006.11.018

Nygaard, N., Piil, R. T. & Mølmer, K. (2008). Feshbach molecules in a one-dimensional optical lattice. Physical Review A, 77(021601(R)). https://doi.org/10.1103/PhysRevA.77.021601

Krohn, C. F., Kronborg, C., Nielsen, O. B. & Odgaard, B. V. (2008). Contributions to the Middle to Late Pleistocene glacial stratigraphy of Central Jutland. Abstract from 28th Nordic Geologic Winter Meeting, Aalborg, Denmark.

Kronborg, C., Krohn, C. F., Nielsen, O. B. & Odgaard, B. V. (2008). Pre Cromerian glacial deposits in Denmark. Abstract from 28th Nordic Geological Winter Meeting, Aalborg, Denmark.

Krohn, C. F., Kronborg, C., Odgaard, B. V. & Larsen, N. K. (2008). Early and early Middle Pleistocene - Cromerian II interglacial and pre-Cromerian glacigenic deposits in western Denmark. Poster session presented at XVII INQUA Congress, Cairns, Australia.