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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Pedersen, L. H. & Rangan, C. (2008). Controllability and Universal Three-qubit Quantum Computation with Trapped Electron States. Quantum Information Processing, 7(1), 33-42. https://doi.org/10.1007/s11128-007-0070-5

Kragh, H. (2008). The science of chemistry and its domains: Matter, elements and cosmos. In K. J. Jensen & A. K. Nielsen (Eds.), Aspects of Philosophy of Chemistry (pp. 67-88). Danish Society for the History of Chemistry.

Kragh, H. (2008). Når opdagelser afvises eller ignoreres: Et videnskabshistorisk perspektiv. FASID, (3), 4-11.

Fournais, S. & Sørensen, T. Ø. (2010). The electron densities of pseudorelativistic eigenfunctions are smooth away from the nuclei. Communications in Partial Differential Equations, 35(7), 1276-1291. https://doi.org/10.1080/03605300903575865

Fournais, S. & Kachmar, A. (2009). On the energy of bound states for magnetic Schrödinger operators. Journal of the London Mathematical Society, 80, 233-255. https://doi.org/10.1112/jlms/jdp028

Hjørringgaard, C. U., Pedersen, J. M., Vosegaard, T., Nielsen, N. C. & Skrydstrup, T. (2009). An automatic solid-phase synthesis of peptaibols. Journal of Organic Chemistry, 74, 1329–1332.

Tosner, Z., Vosegaard, T., Kehlet, C., Khaneja, N., Glaser, S. & Nielsen, N. C. (2009). Optimal control in NMR spectroscopy: Numerical implementation in SIMPSON. Journal of Magnetic Resonance, 197, 120-134. https://doi.org/10.1016/j.jmr.2008.11.020

Nielsen, J. T., Bjerring, M., Jeppesen, M., Pedersen, R. O., Pedersen, J. M., Hein, K. L., Vosegaard, T., Skrydstrup, T., Otzen, D. & Nielsen, N. C. (2009). Unique identification of supramolecular structures in amyloid fibrils by solid-state NMR spectroscopy. Angewandte Chemie International Edition, 48, 2118-2121.

Hansen, F. A. & Grønbæk, K. (2008). Urban Web Services—Experiences and Future Directions. In Workshop on Digital Urban Living

Kobbelgaard, S., Brandes, S. & Jørgensen, K. A. (2008). Organocatalysed [1,3]-sigmatropic Rearrangement. Chemistry: A European Journal, 14, 1464.

Cabrera, S., Aleman, J., Bolze, P., Bertelsen, S. & Jørgensen, K. A. (2008). An Unexpected Organocatalytic Tandem Michael-Morita-Baylis-Hilmann Reaction. Angewandte Chemie International Edition, 125.

Aleman, J., Jacobsen, C. B., Frisch, K., Overgaard, J. & Jørgensen, K. A. (2008). Organocatalytic Asymmetric Vinylogous Addition to Quinones - Formation of Optically Active α-Aryl Ketones. Chemical Communications, 632.

Kragh, H. (2008). Pierre Duhem, entropy, and Christian faith. Physics in Perspective, 10(4), 379-395. https://doi.org/10.1007/s00016-007-0365-z

Franke, P. T., Lyng Johansen, R., Bertelsen, S. & Jørgensen, K. A. (2008). Organocatalytic Enantioselective One-pot Synthesis and Application of Substituted 1,4-dihydropyridines - Hantzsch Ester Analogues. Chemistry - An Asian Journal, 3, 216.

Kragh, H. (2008). Kants kosmologi og dens rolle i 1800-tallets kulturkamp. Filosofiske Studier, 24, 198-206.

Cabrera, S., Aleman, J., Reyes Martin, E., Milelli, A., Kobbelgaard, S. & Jørgensen, K. A. (2008). Organocatalytic Asymmetric Synthesis of α,α-Disubstituted α-Amino Acids and Derivatives. Journal of the American Chemical Society, 130, 12031.

Bertelsen, S., Lyng Johansen, R. & Jørgensen, K. A. (2008). Controlling the Formation of 1 out of 64 Stereoisomers by Organocatalysis. Chemical Communications, 3016.

Franke, P. T., Richter, B. & Jørgensen, K. A. (2008). Organocatalytic Asymmetric Synthesis of Functionalized 3,4-Dihydropyran Derivatives. Chemistry: A European Journal, 14, 6317.

Elsner, P., Jiang, H., Bjerg Nielsen, J., Pasi, F. & Jørgensen, K. A. (2008). A Modular and Organocatalytic Asymmetric Approach Towards the Synthesis of γ-Butyrolactone Autoregulators from Streptomycetes. Chemical Communications, 5827.

Bolze, P., Dickmeiss, G. & Jørgensen, K. A. (2008). Organocatalytic Asymmetric Synthesis of 5-(Trialkylsilyl)-2-cyclohexenones and the Transformation into Useful Building Blocks. Organic Letters, 10, 3753.

Aleman, J., Milelli, A., Cabrera, S., Reyes Martin, E. & Jørgensen, K. A. (2008). Asymmetric 1,4-Addition of Oxazolones to Nitroalkenes by Bifunctional Cinchona Alkaloid Thiourea Organocatalysts: Synthesis of α,α-Disubstituted α-Amino Acids. Chemistry: A European Journal, 14, 10958.

Paixao, M. W., Nielsen, M., Jacobsen, C. B. & Jørgensen, K. A. (2008). Organocatalytic Asymmetric Ring-opening of Aziridines. Organic & Biomolecular Chemistry, 6, 3467.

Kelly, R. E., Lukas, M., Kantorovich, L. N., Otero Martin, R., Xu, W., Mura, M., Lægsgaard, E., Stensgaard, I. & Besenbacher, F. (2008). Understanding the disorder of the DNA base cytosine on the Au(111) surface. Journal of Chemical Physics, 129, 184707. https://doi.org/10.1063/1.3001585

Knudsen, H., Nielsen, H. & Nielsen, K. H. (2008). From private philanthropy to public funding. In H. Kragh, P. C. Kjærgaard, H. Nielsen & K. Hvidtfelt Nielsen (Eds.), Science in Denmark: A Thousand-Year History (1 ed., pp. 397-421). Aarhus Universitetsforlag.

Knudsen, H., Nielsen, H. & Nielsen, K. H. (2008). The Carlsberg Laboratory: envisioning utility-oriented basic research. In H. Kragh, P. C. Kjærgaard, H. Nielsen & K. Hvidtfelt Nielsen (Eds.), Science in Denmark: A Thousand-Year History (1 ed., pp. 487-493). Aarhus Universitetsforlag.

Knudsen, H., Nielsen, H. & Nielsen, K. H. (2008). The Danish insulin adventure: two academics as entrepreneurs. In H. Kragh, P. C. Kjærgaard, H. Nielsen & K. Hvidtfelt Nielsen (Eds.), Science in Denmark: A Thousand-Year History (1 ed., pp. 493-496). Aarhus Universitetsforlag.

Turba, S., Walther, O., Schindler, S., Preuss Nielsen, L., Hazell, A. C., McKenzie, C., Lloret, F., Cano, J. & Julve, M. (2008). Syntheses, Structures, and Properties of Copper(II) Complexes of Bis(2-pyridylmethyl) Derivatives of o-, m-, and p-Phenylenediamine and Aniline. Inorganic Chemistry, 47(20), 96129623.

Pedersen, K. M. & Kragh, H. (2008). The Phantom Moon of Venus, 1645-1768. Journal of Astronomical History and Heritage, 11(3), 227-234.

Carstensen, D. W. & Olesen, J. M. (2009). Wallacea and its nectarivorous birds: nestedness and modules. Journal of Biogeography, 36(8), 1540-1550.

Herbsleb, M., Christensen, O. F., Thykjaer, T., Wiuf, C., Borre, M., Ørntoft, T. F. & Dyrskjøt, L. (2008). Bioinformatic identification of FGF, p38-MAPK, and calcium signalling pathways associated with carcinoma in situ in the urinary bladder. B M C Cancer, 8, 37. https://doi.org/10.1186/1471-2407-8-37

Nielsen, J. & Mailund, T. (2008). SNPFile - A software library and file format for large scale association mapping and population genetics studies. B M C Bioinformatics, 9(526), 1-11. https://doi.org/10.1186/1471-2105-9-526

Hougaard, B. K., Madsen, L. H., Sandal, N., de Carvalho Moretzsohn, M., Fredslund, J., Schauser, L., Nielsen, A. M., Rohde, T., Sato, S., Tabata, S., Bertioli, D. J. & Stougaard, J. (2008). Legume anchor markers link syntenic regions between Phaseolus vulgaris, Lotus japonicus, Medicago truncatula and Arachis. Genetics, 179(4), 2299-312. https://doi.org/10.1534/genetics.108.090084

Zhukov, V., Radutoiu, S., Madsen, L. H., Rychagova, T., Ovchinnikova, E., Borisov, A., Tikhonovich, I. & Stougaard, J. (2008). The pea Sym37 receptor kinase gene controls infection-thread initiation and nodule development. Molecular plant-microbe interactions, 21(12), 1600-8. https://doi.org/10.1094/MPMI-21-12-1600

Fukai, E., Dobrowolska, A. D., Madsen, L. H., Madsen, E. B., Umehara, Y., Kouchi, H., Hirochika, H. & Stougaard, J. (2008). Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus. Plant Molecular Biology, 68(6), 653-63. https://doi.org/10.1007/s11103-008-9397-2

Gittel, A., Wieczorek, A., Sørensen, K., Skovhus, T., Ingvorsen, K. & Schramm, A. (2008). Effect of nitrate addition on the diversity and activity of sulfate-reducing prokaryotes in high-temperature oil production systems. Poster session presented at 12th International Symposium on Microbial Ecology (ISME-12), Cairns, Australia.

Gittel, A., Wieczorek, A., Sørensen, K., Skovhus, T., Ingvorsen, K. & Schramm, A. (2008). Effect of nitrate addition on prokaryotic diversity and the activity of sulfate-reducing prokaryotes in high-temperature oil production systems. Abstract from Reservoir Microbiology Forum, London, United Kingdom.

Fogtmann, M. H., Fritsch, J. & Kortbek, K. J. (2008). Kinesthetic Interaction: Revealing the Bodily Potential in Interaction Design. In Proceedings of the ACM OZCHI Conference (pp. 89-96). Association for Computing Machinery. https://doi.org/10.1145/1517744.1517770

Vlasáková, B., Kalinová, B., Gustafsson, M. & Teichert, H. (2008). Cockroaches as pollinators of Clusia aff. sellowiana (Clusiaceae) on Inselbergs in French Guiana. Annals of Botany, 295-304.

Gustafsson, M. (2008). Gammalt och nytt i blomväxternas familjeindelning. Växter i Hälsingland och Gästrikland, 26(2), 18-22.

Clausen, K. T., Larsen, M. H., Iversen, N. K. & Mouritsen, K. N. (2008). The influence of trematodes on the macroalgae consumption by the common periwinkle Littorina littorea. Journal of the Marine Biological Association of the United Kingdom, 88(7), 1481-1485. https://doi.org/10.1017/S0025315408001744

Larsen, K. & Bendixen, C. (2008). Sus scrofa torsin 1B (TOR1B) gene, exons 1, 2 and partial cds. Genbank Access. No. FJ375343. Dataset

Larsen, K. & Bendixen, C. (2008). Sus scrofa torsin 2A (TOR2A) gene, exons 2, 3 and partial cds. Genbank Access. No. FJ375344. Dataset

Larsen, K. & Bendixen, C. (2008). Sus scrofa torsin 3A (TOR3A) mRNA, partial cds. Genbank Access. No. FJ375345. Dataset

Ehlers, B. & Schierup, M. H. (2008). When gametophytic self-incompatibility meets gynodioecy. Genetics Research, 90(1), 27-35. https://doi.org/10.1017/S0016672307009007

Castric, V., Bechsgaard, J., Schierup, M. H. & Vekemans, X. (2008). Repeated adaptive introgression at a gene under multiallelic balancing selection. P L o S Genetics, 4(8), e1000168. https://doi.org/10.1371/journal.pgen.1000168

Schierup, M. H., Bechsgaard, J. S. & Christiansen, F. B. (2008). Selection at work in self-incompatible Arabidopsis lyrata. II. Spatial distribution of S haplotypes in Iceland. Genetics, 180(2), 1051-9. https://doi.org/10.1534/genetics.108.088799

Preker, P., Nielsen, J., Kammler, S., Lykke-Andersen, S., Christensen, M. S., Mapendano, C. K., Schierup, M. H. & Jensen, T. H. (2008). RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters. Science, 322(5909), 1851-1854. https://doi.org/10.1126/science.1164096

Besenbacher, S., Mailund, T. & Schierup, M. H. (2008). Local Phylogeny Mapping of Quantitative Traits: Higher Accuracy and Better Ranking Than Single Marker Association in Genomewide Scans. Genetics. https://doi.org/10.1534/genetics.108.092643

Lund, M. B., Holmstrup, M., Davidson, S. K. & Schramm, A. (2008). Earthworms and their Nephridial Symbionts: Co-diversification and Maintenance of the Symbiosis. Abstract from 2nd ASM Conference on Beneficial Microbes, San Diego, United States.

Thøgersen, J., Jensen, S. K., Petersen, C. & Keiding, S. R. (2008). Reorientation of OH¯ in Water. Chemical Physics Letters, 466, 1-5.

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Anne Kirstine Mehlsen