Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Bofill-De Ros, X. (2023). Toward learning the rules that predict siRNA efficacy. Molecular Therapy - Nucleic Acids, 33, 543-544. https://doi.org/10.1016/j.omtn.2023.07.023

Fuchs, S., Norden, B., Neumann, F., Kaul, N., Tanaka, A., Kukkonen, I. T., Pascal, C., Christiansen, R., Gola, G., Šafanda, J., Espinoza-Ojeda, O. M., Marzan, I., Rybach, L., Balkan-Pazvantoğlu, E., Ramalho, E. C., Dědeček, P., Negrete-Aranda, R., Balling, N., Poort, J. ... Verdoya, M. (2023). Quality-assurance of heat-flow data: The new structure and evaluation scheme of the IHFC Global Heat Flow Database. Tectonophysics, 863, Article 229976. https://doi.org/10.1016/j.tecto.2023.229976

Tallaksen, H. B. L., Johannsen, E. B., Just, J., Viuff, M. H., Gravholt, C. H. & Skakkebæk, A. (2023). The multi-omic landscape of sex chromosome abnormalities: current status and future directions. Endocrine Connections, 12(9), Article e230011. https://doi.org/10.1530/EC-23-0011

Stenshøj, R., Abarghani, A., Badrouchi, N., Yu, Y., Smith, S. A., Rudra, A., Petersen, H. I. & Sanei, H. (2023). Hydrocarbon residue in a Danish chalk reservoir and its effects on CO₂ injectivity. Marine and Petroleum Geology, 156, Article 106424. https://doi.org/10.1016/j.marpetgeo.2023.106424

Jha, M. C. & Nielsen, A. E. B. (2023). Properties of Laughlin states on fractal lattices. Journal of Statistical Mechanics: Theory and Experiment, 2023(5), Article 053103. https://doi.org/10.1088/1742-5468/acd104

Cook, A. M. & Nielsen, A. E. B. (2023). Finite-size topology. Physical Review B, 108(4), Article 045144. https://doi.org/10.1103/PhysRevB.108.045144

Stritzinger, M. D., Holmbo, S., Morrell, N., Phillips, M. M., Burns, C. R., Castellón, S., Folatelli, G., Hamuy, M., Leloudas, G., Suntzeff, N. B., Anderson, J. P., Ashall, C., Baron, E., Boissier, S., Hsiao, E. Y., Karamehmetoglu, E. & Olivares, F. (2023). The Carnegie Supernova Project I: Optical spectroscopy of stripped-envelope supernovae. Astronomy & Astrophysics (A&A), 675, Article A82. https://doi.org/10.1051/0004-6361/202243376

DerKacy, J. M., Paugh, S., Baron, E., Brown, P. J., Ashall, C., Burns, C. R., Hsiao, E. Y., Kumar, S., Lu, J., Morrell, N., Phillips, M. M., Shahbandeh, M., Shappee, B. J., Stritzinger, M. D., Tucker, M. A., Yarbrough, Z., Boutsia, K., Hoeflich, P., Wang, L. ... Reguitti, A. (2023). SN 2021fxy: mid-ultraviolet flux suppression is a common feature of Type Ia supernovae. Monthly Notices of the Royal Astronomical Society, 522(3), 3481-3505. https://doi.org/10.1093/mnras/stad1171

Zhu, J., Jiang, N., Dong, S., Filippenko, A. V., Rudy, R. J., Pastorello, A., Ashall, C., Bose, S., Post, R. S., Bersier, D., Benetti, S., Brink, T. G., Chen, P., Dou, L., Elias-Rosa, N., Lundqvist, P., Mattila, S., Russell, R. W., Sitko, M. L. ... Zheng, W. K. (2023). SN 2017egm: A Helium-rich Superluminous Supernova with Multiple Bumps in the Light Curves. Astrophysical Journal, 949(1), Article 23. https://doi.org/10.3847/1538-4357/acc2c3

Brown, P. J., Robertson, M., Devarakonda, Y., Sarria, E., Pooley, D. & Stritzinger, M. D. (2023). A Swift Response to Newly Discovered, Nearby Transients †. Universe, 9(5), Article 218. https://doi.org/10.3390/universe9050218

Kwok, L. A., Jha, S. W., Temim, T., Fox, O. D., Larison, C., Camacho-Neves, Y., Brenner Newman, M. J., Pierel, J. D. R., Foley, R. J., Andrews, J. E., Badenes, C., Barna, B., Bostroem, K. A., Deckers, M., Flörs, A., Garnavich, P., Graham, M. L., Graur, O., Hosseinzadeh, G. ... Stritzinger, M. (2023). A JWST Near- and Mid-infrared Nebular Spectrum of the Type Ia Supernova 2021aefx. Astrophysical Journal Letters, 944(1), Article L3. https://doi.org/10.3847/2041-8213/acb4ec

Neumann, K. D., Holoien, T. W. S., Kochanek, C. S., Stanek, K. Z., Vallely, P. J., Shappee, B. J., Prieto, J. L., Pessi, T., Jayasinghe, T., Brimacombe, J., Bersier, D., Aydi, E., Basinger, C., Beacom, J. F., Bose, S., Brown, J. S., Chen, P., Clocchiatti, A., Desai, D. D. ... Monard, L. A. G. (2023). The ASAS-SN bright supernova catalogue – V. 2018–2020. Monthly Notices of the Royal Astronomical Society, 520(3), 4356-4369. https://doi.org/10.1093/mnras/stad355

Chen, N. M., Tucker, M. A., Hoyer, N., Jha, S. W., Kwok, L. A., Leroy, A. K., Rosolowsky, E., Ashall, C., Anand, G., Bigiel, F., Boquien, M., Burns, C., Dale, D., DerKacy, J. M., Egorov, O. V., Galbany, L., Grasha, K., Hoeflich, P., Hsiao, E. ... Williams, T. G. (2023). Serendipitous Nebular-phase JWST Imaging of SN Ia SN 2021aefx: Testing the Confinement of ⁵⁶Co Decay Energy. Astrophysical Journal Letters, 944(2), Article L28. https://doi.org/10.3847/2041-8213/acb6d8

Holmbo, S., Stritzinger, M. D., Karamehmetoglu, E., Burns, C. R., Morrell, N., Ashall, C., Hsiao, E. Y., Galbany, L., Folatelli, G., Phillips, M. M., Baron, E., Gutiérrez, C. P., Leloudas, G., Müller-Bravo, T. E., Hoeflich, P., Taddia, F. & Suntzeff, N. B. (2023). The Carnegie Supernova Project I: Spectroscopic analysis of stripped-envelope supernovae. Astronomy and Astrophysics, 675, Article A83. https://doi.org/10.1051/0004-6361/202245334

Kumar, S., Hsiao, E. Y., Ashall, C., Phillips, M. M., Morrell, N., Hoeflich, P., Burns, C. R., Galbany, L., Baron, E., Contreras, C., Davis, S., Diamond, T., Förster, F., Graham, M. L., Karamehmetoglu, E., Kirshner, R. P., Koribalski, B., Krisciunas, K., Lu, J. ... Uddin, S. A. (2023). Near-infrared and Optical Nebular-phase Spectra of Type Ia Supernovae SN 2013aa and SN 2017cbv in NGC 5643. Astrophysical Journal, 945(1), Article 27. https://doi.org/10.3847/1538-4357/acad73

Ailawadhi, B., Dastidar, R., Misra, K., Roy, R., Hiramatsu, D., Howell, D. A., Brink, T. G., Zheng, W., Galbany, L., Shahbandeh, M., Arcavi, I., Ashall, C., Bostroem, K. A., Burke, J., Chapman, T., Dimple, Filippenko, A. V., Gangopadhyay, A., Ghosh, A. ... Yadav, L. (2023). Photometric and spectroscopic analysis of the Type II SN 2020jfo with a short plateau. Monthly Notices of the Royal Astronomical Society, 519(1), 248-270. https://doi.org/10.1093/mnras/stac3234

Cai, Z., Wu, X., Thomsen, B., Lund, M. S. & Sahana, G. (2023). Genome-wide association study identifies functional genomic variants associated with young stock survival in Nordic Red Dairy Cattle. Journal of Dairy Science, 106(11), 7832-7845. https://doi.org/10.3168/jds.2023-23252

Pedersen, R. Ø., Faurby, S. & Svenning, J. C. (2023). Late-Quaternary megafauna extinctions have strongly reduced mammalian vegetation consumption. Global Ecology and Biogeography, 32(10), 1814-1826. https://doi.org/10.1111/geb.13723

Shaik, I. & van de Pol, J. (2023). Concise QBF Encodings for Games on a Grid (extended version). https://doi.org/10.48550/arXiv.2303.16949

Shaik, I., Mayer-Eichberger, V., van de Pol, J. & Saffidine, A. (2023). Implicit State and Goals in QBF Encodings for Positional Games (extended version). https://doi.org/10.48550/arXiv.2301.07345

Shaik, I. & van de Pol, J. (2023). Optimal Layout Synthesis for Quantum Circuits as Classical Planning. In 2023 IEEE/ACM International Conference on Computer Aided Design (ICCAD) IEEE. https://doi.org/10.1109/ICCAD57390.2023.10323924

Maurya, P. K., Foged, N., Madsen, L. M. & Christiansen, A. V. (2023). Comparison of towed electromagnetic with airborne electromagnetic and electrical resistivity tomography in a hydrogeophysical context. Geophysical Journal International, 235(1), 817-830. https://doi.org/10.1093/gji/ggad276

Carling, P., Jansen, J., Su, T., Andersen, J. L. & Knudsen, M. F. (2023). Ice-buttressing-controlled rock slope failure on a cirque headwall, Lake District, UK. Earth Surface Dynamics, 11(4), 817-833. https://doi.org/10.5194/esurf-11-817-2023

Romundset, A., Akcar, N., Fredin, O., Andersen, J. L., Høgaas, F., Christl, M., Yesilyurt, S. & Schluchter, C. (2023). Early Holocene thinning and final demise of the Scandinavian Ice Sheet across the main drainage divide of southern Norway. Quaternary Science Reviews, 317, Article 108274. https://doi.org/10.1016/j.quascirev.2023.108274

Andreasen, N., Jackson, R., Rudra, A., Nøhr-Hansen, H., Sanei, H., Bojesen-Koefoed, J., Seidenkrantz, M. S., Pearce, C., Thibault, N. & Ribeiro, S. (2023). From land to sea: provenance, composition, and preservation of organic matter in a marine sediment record from the North-East Greenland shelf spanning the Younger Dryas–Holocene. Boreas, 52(4), 459-475. https://doi.org/10.1111/bor.12630

Haenel, M., Istenič, D., Brix, H. & Arias, C. A. (2022). Wastewater-Fertigated Short-Rotation Coppice, a CombinedScheme of Wastewater Treatment and Biomass Production: A State-of-the-Art Review. Forests, 13(5), Article 810. https://doi.org/10.3390/f13050810

Stokholm, A., Aguirre Børsen-Koch, V., Stello, D., Hon, M. & Reyes, C. (2023). A unified exploration of the chronology of the Galaxy. Monthly Notices of the Royal Astronomical Society, 524(2), 1634-1650. https://doi.org/10.1093/mnras/stad1912

Babizhetskyy, V., Myakush, O., Kotur, B., Smetana, V., Zheng, C. & Mudring, A. V. (2023). Crystal and electronic structures of the new ternary gallide Zr₁₂Pd_40−xGa_31+y (x = 0–1.5, y = 0–0.5). Journal of Solid State Chemistry, 327, Article 124250. https://doi.org/10.1016/j.jssc.2023.124250

Farmer, R., Renzo, M., Götberg, Y., Bellinger, E., Justham, S. & De Mink, S. E. (2023). Observational predictions for Thorne-żytkow objects. Monthly Notices of the Royal Astronomical Society, 524(2), 1692-1709. https://doi.org/10.1093/mnras/stad1977

Afshani, P. & Cheng, P. (2023). Lower Bounds for Intersection Reporting Among Flat Objects. In E. W. Chambers & J. Gudmundsson (Eds.), 39th International Symposium on Computational Geometry, SoCG 2023 Article 3 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SoCG.2023.3

Naldal, M. L. (2022, Dec 11). Den Nye Stjerne.

Pandit, B., Johansen, M., Andersen, B. P., Martínez-Cisneros, C. S., Levenfeld, B., Ravnsbæk, D. B. & Varez, A. (2023). All-solid-state sodium-ion batteries operating at room temperature based on NASICON-type NaTi₂(PO₄)₃ cathode and ceramic NASICON solid electrolyte: A complete in situ synchrotron X-ray study. Chemical Engineering Journal, 472, Article 144509. https://doi.org/10.1016/j.cej.2023.144509

Henriksen, L. D. R., Larsen, M. B., Johnsen, T. J., Larsen, S. E., Riis, T. & Baattrup-Pedersen, A. (2023). Root development is faster in common species of Potamogeton compared to declining species of Potamogeton in Danish lowland streams. Aquatic Botany, 189, Article 103702. https://doi.org/10.1016/j.aquabot.2023.103702

Ung, K. L., Schulz, L., Stokes, D. L., Hammes, U. Z. & Pedersen, B. P. (2023). Substrate recognition and transport mechanism of the PIN-FORMED auxin exporters. Trends in Biochemical Sciences, 48(11), 937-948. https://doi.org/10.1016/j.tibs.2023.07.006

van Beest, F. M., Schmidt, N. M., Stewart, L., Hansen, L. H., Michelsen, A., Mosbacher, J. B., Gilbert, H., Le Roux, G. & Hansson, S. V. (2023). Geochemical landscapes as drivers of wildlife reproductive success: Insights from a high-Arctic ecosystem. Science of the Total Environment, 903, Article 166567. https://doi.org/10.1016/j.scitotenv.2023.166567

Tang, Z., Bromley, S. T. & Hammer, B. (2023). A machine learning potential for simulating infrared spectra of nanosilicate clusters. Journal of Chemical Physics, 158(22), Article 224108. https://doi.org/10.1063/5.0150379

Vijayan, H., Laursen, A. P., Stingaciu, M., Shyam, P., Gjørup, F. H., Simonsen, J. & Christensen, M. (2023). High-Performance Hexaferrite Ceramic Magnets Made from Nanoplatelets of Ferrihydrite by High-Temperature Calcination for Permanent Magnet Applications. ACS Applied Nano Materials, 6(10), 8156-8167. https://doi.org/10.1021/acsanm.2c05227

Okhrimenko, D. V., Ceccato, M., Tougaard, S., Foss, M., Pezennec, E. & Solvang, M. (2023). Comment on “Which fraction of stone wool fibre surface remains uncoated by binder? A detailed analysis by time-of-flight secondary ion mass spectrometry and X-ray photoelectron spectroscopy” by Hirth et al., 2021, RSC Adv., 11, 39545, DOI: 10.1039/d1ra06251d. RSC Advances, 13(24), 16688-16692. https://doi.org/10.1039/d2ra07959c

Hansen, A. S., Jensen, L. S., Gammelgaard, K. R., Ryttersgaard, K. G., Krapp, C., Just, J., Jønsson, K. L., Jensen, P. B., Boesen, T., Johannsen, M., Etzerodt, A., Deleuran, B. W. & Jakobsen, M. R. (2023). T-cell derived extracellular vesicles prime macrophages for improved STING based cancer immunotherapy. Journal of Extracellular Vesicles, 12(8), Article 12350. https://doi.org/10.1002/jev2.12350

Videsen, S. K. A., Simon, M., Christiansen, F., Friedlaender, A., Goldbogen, J., Malte, H., Segre, P., Wang, T., Johnson, M. & Madsen, P. T. (2023). Cheap gulp foraging of a giga-predator enables efficient exploitation of sparse prey. Science Advances, 9(25), eade3889. Article ade3889. https://doi.org/10.1126/sciadv.ade3889, https://doi.org/10.1126/sciadv.ade3889

Wu, R., Dong, M. & Liu, L. (2023). Nano–Bio Interface of Molybdenum Disulfide for Biological Applications. Coatings, 13(6), Article 1122. https://doi.org/10.3390/coatings13061122

Von Friesen, L. W., Paulsen, M. L., Muller, O., Grundger, F. & Riemann, L. (2023). Glacial meltwater and seasonality influence community composition of diazotrophs in Arctic coastal and open waters. FEMS Microbiology Ecology, 99(8), Article fiad067. https://doi.org/10.1093/femsec/fiad067

Herrik, A. L., Mogensen, N., Svenning, J. C. & Buitenwerf, R. (2023). Rotational grazing with cattle-free zones supports the coexistence of cattle and wild herbivores in African rangelands. Journal of Applied Ecology, 60(10), 2154-2166. https://doi.org/10.1111/1365-2664.14493

Gonzalez-Flo, E., Ortiz, A., A. Arias, C., Díez-Montero, R., Kohlheb, N., Schauser, U. H., García, J. & Gregersen, P. K. S. (2023). Sludge Treatment Wetland for Treating Microalgae Digestate Grown in Agricultural Runoff: A Technical, Economic, and Environmental Assessment. Water, 15(12), Article 2159. https://doi.org/10.3390/w15122159

Koren, K. & McGraw, C. M. (2023). Let’s Talk about Slime; or Why Biofouling Needs More Attention in Sensor Science. ACS Sensors, 8(7), 2432-2439. https://doi.org/10.1021/acssensors.3c00961

Wiorek, A., Steininger, F., Crespo, G. A., Cuartero, M. & Koren, K. (2023). Imaging of CO₂ and Dissolved Inorganic Carbon via Electrochemical Acidification-Optode Tandem. ACS Sensors, 8(7), 2843-2851. https://doi.org/10.1021/acssensors.3c00790

Koren, K., Steininger, F. & McGraw, C. M. (2023). Reducing biofouling on optical oxygen sensors; a simple modification enabling sensor cleaning via water splitting. Analytical Methods, 15(22), 2773-2776. https://doi.org/10.1039/d3ay00376k

Steininger, F., Veerubhotla, R., Revsbech, N. P., Marzocchi, U. & Koren, K. (2023). From two sensors to a single sensor: Better understanding of oxygen–sulfide interfaces. Limnology and Oceanography: Methods, 21(10), 606-614. https://doi.org/10.1002/lom3.10568

Evans, D. C. S., Khamas, A. B., Marcussen, L., Rasmussen, K. S., Klitgaard, J. K., Kallipolitis, B. H., Nielsen, J., Otzen, D. E., Leake, M. C. & Meyer, R. L. (2023). GFP fusions of Sec-routed extracellular proteins in Staphylococcus aureusreveal surface-associated coagulase in biofilms. Microbial Cell, 10(7), 145-156. https://doi.org/10.15698/mic2023.07.800

Abele, H., Alekou, A., Algora, A., Andersen, K., Baeßler, S., Barron-Pálos, L., Barrow, J., Baussan, E., Bentley, P., Berezhiani, Z., Beßler, Y., Bhattacharyya, A. K., Bianchi, A., Bijnens, J., Blanco, C., Kraljevic, N. B., Blennow, M., Bodek, K., Bogomilov, M. ... Zou, Y. (2023). Particle physics at the European Spallation Source. Physics Reports, 1023, 1-84. https://doi.org/10.1016/j.physrep.2023.06.001

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