Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Mallorquí-Fernández, N., Manandhar, SP., Mallorquí-Fernández, G., Usón, I., Wawrzonek, K., Kantyka, T., Solà, M., Thøgersen, I., Enghild, J. J., Potempa, J. & Gomis-Rüth, FX. (2008). A New Autocatalytic Activation Mechanism for Cysteine Proteases Revealed by Prevotella intermedia Interpain A. Journal of Biological Chemistry.

Knudsen, H. & Klostergaard, L. (2007). Freakshow, realityshow eller pedalsport. Information, 1. http://www.information.dk/144658

Kliment, CR., Tobolewski, JM., Manni, ML., Tan, RJ., Enghild, J. J. & Oury, TD. (2008). Extracellular superoxide dismutase protects against matrix degradation of heparan sulfate in the lung. Antioxidants & Redox Signaling.

Knudsen, H. (2007). Maskinerne i haven: tre erindringsbaserede rundrejser i Danmarks nukleare landskab. http://www.risoe.dk/rispubl/art/2007_256.pdf

Abildgaard, L., Engberg, R., Pedersen, K., Schramm, A. & Højberg, O. (2006). Sequence variation among Alpha-toxin of Clostridium perfringens strains isolated from diseased and healthy chickens. In RRI-INRA Gut Microbiology 2006: Proceedings of the 5th Biennial Meeting Research to Improve Health, Immune Response and Nutrition

Hebelstrup, K. H. & Jensen, E. Ø. (2008). Expression of NO scavenging hemoglobin is involved in the timing of bolting in Arabidopsis thaliana. Planta, 227(4), 917-27. https://doi.org/10.1007/s00425-007-0667-z

Christiansen, H., Hansen, A. C., Vijn, I., Pallisgaard, N., Larsen, K., Yang, W. C., Bisseling, T., Marcker, K. A. & Jensen, E. Ø. (1996). A novel type of DNA-binding protein interacts with a conserved sequence in an early nodulin ENOD12 promoter. Plant Molecular Biology, 32(5), 809-21.

Anderson, C. R., Jensen, E. O., LLewellyn, D. J., Dennis, E. S. & Peacock, W. J. (1996). A new hemoglobin gene from soybean: a role for hemoglobin in all plants. Proceedings of the National Academy of Sciences (PNAS), 93(12), 5682-7.

Laursen, N. B., Larsen, K., Knudsen, J. Y., Hoffmann, H. J., Poulsen, C., Marcker, K. A. & Jensen, E. O. (1994). A protein binding AT-rich sequence in the soybean leghemoglobin c3 promoter is a general cis element that requires proximal DNA elements to stimulate transcription. Plant Cell, 6(5), 659-68. https://doi.org/10.1105/tpc.6.5.659

Metz, B. A., Welters, P., Hoffmann, H. J., Jensen, E. O. & Schell, J. (1988). Primary structure and promoter analysis of leghemoglobin genes of the stem-nodulated tropical legume Sesbania rostrata: conserved coding sequences, cis-elements and trans-acting factors. Molecular Genetics and Genomics, 214(2), 181-91.

Jensen, E. Ø., Marcker, K. A., Schell, J. & de Bruijn, F. J. (1988). Interaction of a nodule specific, trans-acting factor with distinct DNA elements in the soybean leghaemoglobin Ibc(3) 5' upstream region. EMBO Journal, 7(5), 1265-1271.

Konieczny, A., Jensen, E. O., Marcker, K. A. & Legocki, A. (1987). Molecular cloning of lupin leghemoglobin cDNA. Molecular Biology Reports, 12(1), 61-6.

Jensen, E. O., Marcker, K. A. & Villadsen, IS. (1986). Heme regulates the expression in Saccharomyces cerevisiae of chimaeric genes containing 5'-flanking soybean leghemoglobin sequences. EMBO Journal, 5(5), 843-7.

Marcker, A., Lund, M., Jensen, E. Ø. & Marcker, K. A. (1984). Transcription of the soybean leghemoglobin genes during nodule development. EMBO Journal, 3(8), 1691-1695.

Bojsen, K., Abildsten, D., Jensen, E. Ø., Paludan, K. & Marcker, K. A. (1983). The chromosomal arrangement of six soybean leghemoglobin genes. EMBO Journal, 2(7), 1165-1168.

Wiborg, O., Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K. & Marcker, K. A. (1983). The structure of an unusual leghemoglobin gene from soybean. EMBO Journal, 2(3), 449-52.

Wiborg, O., Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K. & Marcker, K. A. (1982). The nucleotide sequences of two leghemoglobin genes from soybean. Nucleic Acids Research, 10(11), 3487-94.

Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K., Wiborg, O., Garrett, R., Jørgensen, P. & Marcker, K. A. (1982). The primary structures of two leghemoglobin genes from soybean. Nucleic Acids Research, 10(2), 689-701.

Vijn, I., Christiansen, H., Lauridsen, P., Kardailsky, I., Quandt, H. J., Broer, I., Drenth, J., Jensen, E. O., van Kammen, A. & Bisseling, T. (1995). A 200 bp region of the pea ENOD12 promoter is sufficient for nodule-specific and nod factor induced expression. Plant Molecular Biology, 28(6), 1103-10.

Vijn, I., Yang, W. C., Pallisgård, N., Jensen, E. O., van Kammen, A. & Bisseling, T. (1995). VsENOD5, VsENOD12 and VsENOD40 expression during Rhizobium-induced nodule formation on Vicia sativa roots. Plant Molecular Biology, 28(6), 1111-9.

Larsen, P. F., Nielsen, E. E., Williams, T. D., Hemmer-Hansen, J., Chipman, J. K., Kruhøffer, M., Grønkjær, P., George, S. G., Andersen, L. D. & Loeschcke, V. (2007). Adaptive differences in gene expression in European flounder (Platichthys flesus). Molecular Ecology, 16(22), 4674-83. https://doi.org/10.1111/j.1365-294X.2007.03530.x

Le Hir, H. & Andersen, G. R. (2008). Structural Insights into the exon junction complex. Current Opinion in Structural Biology, 18, 112-119.

Jensen, E. Ø., Paludan, K., Hyldig-Nielsen, JJ., Jørgensen, P. & Marcker, K. A. (1981). The Structure of a Chromosomal Leghemoglobin Gene From Soybean. Nature, 291, 677-678.

Als, A. B., Andersen, L. D., Maase, H. V. D., Koed, K., Mansilla, F., Toldbod, H., Jensen, J. L., Sengeløv, L., Jensen, K. M.-E., Ørntoft, T. F. & Ulhøi, B. P. (2007). Emmprin and Survivin predict response and survival following cisplatin-containing chemotherapy in patients with advanced bladder cancer. Clinical Cancer Research, 13(15), 4407-14.

Andersen, L. D., Zieger, K., Real, F. X., Malats, N., Carrato, A., Hurst, C., Kotwal, S., Knowles, M., Malmstrom, P.-U., de la Torre, M., Wester, K., Allory, Y., Vordos, D., Caillault, A., Radvanyi, F., Hein, A.-M. K., Jensen, J. L., Jensen, K. M.-E., Marcussen, N. & Ørntoft, T. F. (2007). Gene expression signatures predict outcome in non-muscle invasive bladder carcinoma - a multi-center validation study. Clinical Cancer Research, 13(12), 3545-51. https://doi.org/10.1158/1078-0432.CCR-06-2940

Pallesen, L. T., Pedersen, L. R. L., Petersen, T. E. & Rasmussen, J. T. (2007). Characterization of carbohydrate structures of bovine MUC15 and distribution of the mucin in bovine milk. Journal of Dairy Science, 90(7), 3143-3152.

Wæhrens, L. N., Falborg, L., Shi, J., Shi, J., Petersen, T. E., Gilbert, G. E., Dickow, J. A., Heegaard, C. W. & Rasmussen, J. T. (2008). Structure and function of lactadherin in relation to its ability to recognize cellular exposed PS. Poster session presented at 15^th Euroconference on Apoptosis, Portoroz, Slovenia.

Wæhrens, L. N., Falborg, L., Shi, J., Shi, J., Gilbert, G. E., Dickow, J. A., Heegaard, C. W. & Rasmussen, J. T. (2008). Apoptosis detection with fluorescent and radioactive lactadherin. Poster session presented at 15th Euroconference on Apoptosis, Portoroz, Slovenia.

Knudsen, H. (2007). Karl Grandin; Nina Wormbs; Sven Widmalm (eds.) The Science-Industry Nexus: History, Politics, Implications. Centaurus (Copenhagen), 49(3), 250-251.

Knudsen, H. (2006). Anderew Brown, J.D. Bernal: The Sage of Science. Centaurus (Copenhagen), 48(4), 330-331.

Grauslund, M., Vinding, A., Füchtbauer, A. C., Hoflander, K. F., Hjorth, P. H., Jensen, P. B., Sehested, M., Füchtbauer, E.-M. & Jensen, L. H. (2007). A mouse model for studying the interaction of bisdioxopiperazines with topoisomerase IIα in vivo. Molecular Pharmacology, 72(4), 1003-1014. https://doi.org/10.1124/mol.107.036970

Abad, M., Menéndez, C., Füchtbauer, A. C., Serrano, M., Füchtbauer, E.-M. & Palmero, I. (2007). Ing1 mediates p53 accumulation and chromatin modification in respones to oncogenic stress. Journal of Biological Chemistry, 282(42), 31060-31067.

Berge, U., Kristensen, P. & Rattan, S. (2008). Hormetic modulation of differentiation of normal human epidermal keratinocytes undergoing replicative senescence in vitro. Experimental Gerontology, 43, 658-662.

Bødtkjer, E., Prætorius, J., Füchtbauer, E.-M. & Aalkjær, C. (2008). Antibody-independent localization of the electroneutral Na⁺-HCO₃^- cotransporter NBCn1 (slc4a7) in mice. American Journal of Physiology: Cell Physiology, 294(2), C591-C603.

Jacobsen-Lyon, K., Jensen, E. Ø., Jørgensen, J.-E., Marcker, K. A., Peacock, WJ. & Dennis, ES. (1995). Symbiotic and nonsymbiotic hemoglobin genes of Casuarina glauca. Plant Cell, 7(2), 213-23.

Jacobsen, K., Laursen, N. B., Jensen, E. Ø., Marcker, A., Poulsen, C. H. & Marcker, K. A. (1990). HMG I-like proteins from leaf and nodule nuclei interact with different AT motifs in soybean nodulin promoters. Plant Cell, 2(1), 85-94. https://doi.org/10.1105/tpc.2.1.85

Balthazar, M. V., Pedersen, K. R., Crane, P. R., Stamponi, P. R. & Friis, E. M. (2007). Potomacanthus lobatus gen. et sp. nov., a new flower of probable Lauraceae from the Early Cretaceous (Early to Middle Albian) of Eastern North America. American Journal of Botany, 94(12), 2041-2053.

Friis, E. M., Crane, P. R., Pedersen, K. R., Bengtson, S., Donoghue, P. C. J., Grimm, G. W. & Stamponi, M. (2007). Phase-contrast X-ray microtomography links Cretaceous seeds with Gnetales and Bennettitales. Nature, 450, 549-552.

Blechingberg, J., Lykke-Andersen, S., Jensen, T. H., Jørgensen, A. L. & Nielsen, A. L. (2007). Regulatory mechanisms for 3'-end alternative splicing and polyadenylation of the Glial Fibrillary Acidic Protein, GFAP, transcript. Nucleic Acids Research, 35(22), 7636-50. https://doi.org/10.1093/nar/gkm931

Nordentoft, I., Jeppesen, P. B., Nielsen, A. L., Jorgensen, P. & Hermansen, K. (2007). Expression Analysis of cPLA2 Alpha Interacting TIP60 in Diabetic KKAy and Non-Diabetic C57BL Wild-Type Mice: No Impact of Transient and Stable TIP60 Overexpression on Glucose-Stimulated Insulin Secretion in Pancreatic Beta-Cells. The review of diabetic studies : RDS, 4(3), 147-158. https://doi.org/10.1900/RDS.2007.4.147

Olesen, B. (2007). Plantelivet i Ringkøbing Fjord - mellem å og hav. In I. Nielsen & H.-H. Schierup (Eds.), Skjern Å (pp. 201-215)

Basbøll, A., Maybury, D., Riva, F. & West, S. M. (2007). Nonperturbative flat direction decay. Physical Review D, 76(065005). https://doi.org/10.1103/PhysRevD.76.065005

Nielsen, L. R., Jørgensen, E. & Højsgaard, S. (2011). Embedding a State Space Model Into a Markov Decision Process. Annals of Operations Research, 190(1), 289-309. https://doi.org/10.1007/s10479-010-0688-z

Bisgaard, C., Jayatissa, M. N., Enghild, J. J., Sanchéz, C., Artemychyn, R. & Wiborg, O. (2007). Proteomic investigation of the ventral rat hippocampus links DRP-2 to escitalopram treatment resistance and SNAP to stress resilience in the chronic mild stress model of depression. Journal of Molecular Neuroscience, 32(2), 132-44.

Andersen, H. (2008). Experiments and Concepts. (pp. 27-37). Max-Planck-Institut für Wissenschaftsgeschichte.

Heerfordt, A., Møhl, B. & Wahlberg, M. (2007). A wideband connection to sperm whales: A fiber-optic, deep-sea hydrophone array. Deep-Sea Research Part I: Oceanographic Research Papers, 54, 428-436. https://doi.org/10.1016/j.dsr.2006.12.003

Simon, M., Wahlberg, M. & Miller, L. A. (2007). Echolocation clicks from killer whales (Orcinus orca) feeding on herring (Clupea harangus) (L). Acoustical Society of America. Journal, 121(2), 749-752.

Hansen, M. R., Brorson, M., Bildsøe, H. K., Skibsted, J. & Jakobsen, H. J. (2008). Sensitivity enhancement in natural-abundance solid-state ³³S MAS NMR spectroscopy employing adiabatic inversion pulses to the satellite transitions. Journal of Magnetic Resonance, 190, 316-326.

Dall, T. H., Foellmi, C., Pritchard, J., Lo Curto, G., Allende Prito, C., Bruntt, H., Amado, P. J., Arentoft, T., Baes, M., Depagne, E., Fernandez, M., Ivanov, V., Koesterke, L., Monaco, L., O'Brien, K., Sarro, L. M., Saviane, I., Scharwächter, J., Schmidtobreick, L. ... Sterzik, M. (2007). VSOP: the variable star one-shot project: I. Project presentation and first data release. Astronomy & Astrophysics (A&A), 1201-1214.

Korn, A. J., Grundahl, F., Richard, O., Mashonkina, L., Barklem, P. S., Collet, R., Gustafsson, B. & Piskunov, N. (2007). Atomic diffusion and mixing in old stars. I. Very Large Telescope FLAMES-UVES Observations of Stars in NGC 6397. Astrophysical Journal, 671, 402-419.

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