Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Nielsen, K. H. (2010). First view (Erster Blick): Communicative interferences in science, science journalism, and art. Abstract from 4S Annual Meeting, Tokyo, Japan. http://4sonline.org/files/print_program_0820.pdf

Østergaard, S. D., Foldager, L., Allgulander, C., Dahl, A. A., Huuhtanen, M.-T., Rasmussen, I. & Munk-Jørgensen, P. (2010). Psychiatric caseness is a marker of major depressive episode in general practice. Scandinavian Journal of Primary Health Care, 28(4), 211-5. https://doi.org/10.3109/02813432.2010.501235

Esposito, F., Collangeli, L., Della Corte, V., Molfese, C., Palumbo, P., Ventura, S., Merrison, J. P., Nørnberg, P., Roddriguez-Gomez, J. F., Lopez-Moreno, J. J., Battiselli, E., Gueli, S., Paolinetti, R. & International MEDUSA Team, T. (2011). MEDUSA: The observation of atmospheric dust and water vapor to the surface of Mars. Mars, 6, 1-12. http://www.marsjournal.org/contents/2011/0001/files/esposito_mars_2011_0001.pdf

Christensen, N. B., Fitzpatrick, A. & Munday, T. (2010). Fast approximate 1D inversion of frequency domain electromagnetic data. Near Surface Geophysics, 8(1), 1-15. https://doi.org/10.3997/1873-0604.2009026

Sørensen, K. I., Auken, E., Christensen, N. B. & Pellerin, L. (2005). An Integrated Approach for Hydrogeophysical Investigations: New Technologies and a Case History. In D. K. Butler (Ed.), Near-Surface Geophysics (Vol. 13, pp. 585-605). Society of Exploration Geophysics.

Arge, L. A., Danner, A. & Teh, S.-M. (2003). I/O-efficient point location using persistent B-trees. Journal of Experimental Algorithmics, 8, Special Issue. https://doi.org/10.1145/996546.996549

Arge, L. A., Meyer, U., Toma, L. & Zeh, N. (2003). On External-Memory Planar Depth First Search. Journal of Graph Algorithms and Applications, 7, Issue 2, 105-129. http://www.jgaa.info/accepted/2003/Arge+2003.7.2.pdf

Agarwal, P. K., Arge, L. A. & Erickson, J. (2003). Indexing Moving Points. Journal of Computer and System Sciences, 66, Issue 1, 207-243. https://doi.org/10.1016/S0022-0000(02)00035-1

Wickremesinghe, R., Arge, L. A., Chase, J. S. & Vitter, J. S. (2002). Efficient sorting using registers and caches. Journal of Experimental Algorithmics, 7, 9. https://doi.org/10.1145/944618.944627

Arge, L. A., Toma, L. & Vitter, J. S. (2001). I/O-Efficient Algorithms for Problems on Grid-Based Terrains. Journal of Experimental Algorithmics, 6. https://doi.org/10.1145/945394.945395

Agarwal, P. K., Arge, L. A., Erickson, J., Franciosa, P. G. & Vitter, J. S. (2000). Efficient Searching with Linear Constraints. Journal of Computer and System Sciences, 61, Issue 2, 194-216. https://doi.org/10.1006/jcss.2000.1709

Hein, K. L., Kragh-Hansen, U., Morth, J. P., Jeppesen, M., Otzen, D., Møller, J. V. & Nissen, P. (2010). Crystallographic analysis reveals a unique lidocaine binding site on human serum albumin. Journal of Structural Biology, 171, 353-360.

Arge, L. A., Vengroff, D. E. & Vitter, J. S. (2007). External-Memory Algorithms for Processing Line Segments in Geographic Information Systems. Algorithmica, 47, Issue 1, 1-25. https://doi.org/10.1007/s00453-006-1208-z

Buscher, M., Coulton, P., Hemmet, D. & Mogensen, P. H. (2010). Mobile, experimental, public. In M. Buscher, J. Urry & K. Witchger (Eds.), Mobile Methos (pp. 119-137). Routledge.

Green, O., Jørgensen, R. N., Kristensen, K., Bochtis, D. & Sørensen, C. A. G. (2010). Effects of the machine wheel load on grass yield. In P. Savoie, J. Villeneuve & R. Morisette (Eds.), XVIIth World Congress of the International Commission of Agricultural and Biosystems Engineering, Book of Abstracts (pp. 221) https://www.google.dk/search?q=%22Effects+of+the+machine+wheel+load+on+grass+yield%22&sca_esv=9d8ff852ae1b98d5&ei=uJYDZ9ipFPnEwPAPgJ22qAk&ved=0ahUKEwjY5biU6PuIAxV5IhAIHYCODZUQ4dUDCBA&uact=5&oq=%22Effects+of+the+machine+wheel+load+on+grass+yield%22&gs_lp=Egxnd3Mtd2l6LXNlcnAiMiJFZmZlY3RzIG9mIHRoZSBtYWNoaW5lIHdoZWVsIGxvYWQgb24gZ3Jhc3MgeWllbGQiMgUQIRigATIFECEYoAEyBRAhGKABMgUQIRigAUjt7iVQ3QRYjeYlcAJ4AJABAJgBcqABoQKqAQMzLjG4AQPIAQD4AQH4AQKYAgOgAs4BwgILEAAYgAQYsAMYogTCAgsQABiwAxiiBBiJBZgDAIgGAZAGBJIHAzIuMaAHvgo&sclient=gws-wiz-serp

Dantan, A., Marler, J., Albert, M., Guénot, D. & Drewsen, M. (2010). Noninvasive Vibrational Mode Spectroscopy of Ion Coulomb Crystals through Resonant Collective Coupling to an Optical Cavity Field. Physical Review Letters, 105(10), 103001. https://doi.org/10.1103/PhysRevLett.105.103001

Arge, L. A. & Vitter, J. S. (2003). Optimal External Memory Interval Management. S I A M Journal on Computing, 32, Issue 6, 1488-1508. https://doi.org/10.1137/S009753970240481X

Arge, L. A. (2003). The Buffer Tree: A Technique for Designing Batched External Data Structures. Algorithmica, 37, Issue 1, 1-24. https://doi.org/10.1007/s00453-003-1021-x

Arge, L. A., Chase, J. S., Halpin, P., Toma, L., Vitter, J. S., Urban, D. & Wickremesinghe, R. (2003). Efficient Flow Computation on Massive Grid Terrain Datasets. Geoinformatica, 7, Issue 4, 283-313. https://doi.org/10.1023/A:1025526421410

Svane, A., Christensen, N. E., Gorczyca, I., van Schilfgaarde, M., Chantis, A. N. & Kotani, T. (2010). Quasiparticle self-consistent GW theory of III-V nitride semiconductors: Bands, gap bowing, and effective masses. Physical Review B, 82(11), 115102. https://doi.org/10.1103/PhysRevB.82.115102

Yang, Y., Shcön, C. & Sorensen, D. (2010). Are there genes regulation environmental variation? A case study using yield in maize. In Book of Abstracts of the 61st Annual Meeting of the European Association for Animal Production (Vol. 16, pp. 176). Wageningen Academic Publishers.

Arge, L. A., Hinrichs, K., Vahrenhold, J. & Vitter, J. S. (2002). Efficient Bulk Operations on Dynamic R-Trees. Algorithmica, 33, Issue 1, 104-128. https://doi.org/10.1007/s00453-001-0107-6

Arge, L. A. (2002). External-Memory Data Structures. In J. Abello, P. M. Pardalos & M. G. C. Resende (Eds.), Handbook of Massive Data Sets (pp. 313-357). Kluwer Academic Publishers.

Arge, L. A. (1997). External-Memory Algorithms with Applications in GIS. In M. V. Kreveld, J. Nievergelt, T. Roos & P. Widmayer (Eds.), Algorithmic Foundations of Geographic Information Systems (pp. 213-254). Springer.

Kirkegaard, I., Uldbjerg, N. & Oxvig, C. (2010). Biology of pregnancy-associated plasma protein-A in relation to prenatal diagnostics: an overview. Acta Obstetricia et Gynecologica Scandinavica, 89(9), 1118-25. https://doi.org/10.3109/00016349.2010.505639

Kachmar, A. (2010). Magnetic vortices for a Ginzburg-Landau type energy with discontinuous constraint. E S A I M: Control, Optimisation and Calculus of Variations, 16(3), 545-580. https://doi.org/10.1051/cocv/2009009

Tuxen, A. K., Kibsgaard, J., Gøbel, H. T., Lægsgaard, E., Topsøe, H., Besenbacher, F. & Lauritsen, J. V. (2010). Size Threshold in the Dibenzothiophene Adsorption on MoS2 Nanoclusters. A C S Nano, 4(8), 4677-4682. https://doi.org/10.1021/nn1011013

Venkataramani, K., Helveg, S., Hinnemann, B., Reichling, M., Besenbacher, F. & Lauritsen, J. V. (2010). Ordering of monodisperse Ni nanoclusters by templating on high-temperature reconstructed a-Al2O3(0001). Nanotechnology, 21(26), 265602. https://doi.org/10.1088/0957-4484/21/26/265602

Lauritsen, J. V. & Reichling, M. (2010). Atomic resolution non-contact atomic force microscopy of clean metal oxide surfaces. Journal of Physics: Condensed Matter, 22(26). https://doi.org/10.1088/0953-8984/22/26/263001

Kibsgaard, J., Tuxen, A. K., Knudsen, K. G., Brorson, M., Lægsgaard, E., Lauritsen, J. V. & Besenbacher, F. (2010). Comparative atomic-scale analysis of promotional effects by late 3d-transition metals in MoS2 hydrotreating catalysts. Journal of Catalysis, 272(2), 195-203. https://doi.org/10.1016/j.jcat.2010.03.018

Edwards, D. (2012). A note on adding and deleting edges in hierarchical log-linear models. Computational Statistics, 27(4), 799-803. https://doi.org/10.1007/s00180-011-0287-8

Chown, S. L., Hoffmann, A. A., Kristensen, T. N., Angilletta, M. J., Stenseth, N. C. & Pertoldi, C. (2010). Adapting to climate change: a perseictive from evolutionary physiology. Climate Research, 43(3-15), 3-15. https://doi.org/10.3354/cr00879

Pertoldi, C., Kristensen, T. N. & Stenseth, N. C. (2010). Prefase. Climate Research, 43, 1-2. https://doi.org/10.3354/cr00908

Rauff Lind Christensen, T., Klose, A. & Andersen, K. A. (2010). Solving the Single-Sink, Fixed-Charge, Multiple-Choice Transportation Problem by Dynamic Programming. Abstract from 4th Nordic Optimization Symposium, Aarhus, Denmark. http://www.asb.dk/article.aspx?pid=25146

Abreu, G. C. G., Pinheiro, A., Drummond, R. D., Camargo, S. R. & Menossi, M. (2010). Some statistical properties of gene expression clustering for array data. Advances and Applications in Statistics, 14(2), 191-204. http://pphmj.com/abstract/4607.htm

Zhan, B., Angen, Ø., Hedegaard, J., Bendixen, C. & Panitz, F. (2010). The Draft Genome Sequences of Actinobacillus pleuropneumoniae Serotypes 2 and 6. Journal of Bacteriology, 192(21), 5846-5847. https://doi.org/10.1128/JB.00867-10

Fadista, J., Zhan, B., Hedegaard, J. & Bendixen, C. (2010). Structural variation in the pig genome using next-generation sequencing. In Programme and Abstract Book (pp. 51)

Zhan, B., Hedegaard, J., Bendixen, C. & Panitz, F. (2010). Analysis of global variation in pig: Discovery of novel SNPs by whole genome re-sequencing. In Programme and Abstract Book

Nielsen, M., Hedegaard, J., Skovgaard, K., Heegaard, P. M., Bendixen, C. & Thomsen, B. (2010). Expression profiling of mRNA and microRNA in pigs infected with Actinobacillus pleuropneumoniae. In Programme and Astracht Book

Hedegaard, J., Schou, K. K., Skovgaard, K., Zhan, B., Panitz, F., Hornshøj, H., Heegaard, P. M., Angen, Ø., Boye, M. & Bendixen, C. (2010). The porcine systemic response to pleuropneumonia studied by transcriptional profi ling of liver and tracheobronchial lung lymph nodes using multiplexed mRNA-Seq. In Programme and Abstracht Book (pp. 129)

Skovgaard, K., Mortensen, S., Hedegaard, J. & Heegaard, P. M. H. (2010). Local and disseminated acute phase response during bacterial respiratory infection in pigs. Poster session presented at European Colloquium on Acute Phase Proteins, Helsinki, Finland.

Bösenberg, U., Bomholdt Ravnsbæk, D., Hagemann, H., D'Anna, V., Minella, C. B., Pistidda, C., van Beek, W., Jensen, T. R., Bormann, R. & Dornheim, M. (2010). Pressure and Temperature Influence on the Desorption Pathway of the LiBH₄-MgH₂ Composite System. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 114(35), 15212-15217.

Agarwal, P. K., Arge, L. A., Erickson, J. & Yu, H. (2004). Efficient Tradeoff Schemes in Data Structures for Querying Moving Objects. In S. Albers & T. Radzik (Eds.), Algorithms - ESA 2004: 12th Annual European Symposium, Bergen, Norway, September 14-17, 2004. Proceedings (pp. 4-15). Springer. https://doi.org/10.1007/978-3-540-30140-0_3

Arge, L. A. & Toma, L. (2004). Simplified External Memory Algorithms for Planar DAGs. In T. Hagerup & J. Katajainen (Eds.), Algorithm Theory - SWAT 2004: 9th Scandinavian Workshop on Algorithm Theory, Humlebaek, Denmark, July 8-10, 2004. Proceedings (pp. 493-503). Springer. https://doi.org/10.1007/978-3-540-27810-8_42

Kragh, H. & Heymann, M. (2010). Modelling and simulation in the atmospheric and climate sciences. Studies in History and Philosophy of Science Part B: Studies in History and Philosophy of Modern Physics, 41(3).

Kragh, H. (2010). Sommerfeld, the quantum, and the problem approach to physics. Metascience. https://doi.org/10.1007/s11016-010-9456-6

Buhl, H. (2010). Magneter der husker. fysik·kemi, 37(3), 8-9.

Arge, L. A. & Zeh, N. (2003). I/O-efficient strong connectivity and depth-first search for directed planar graphs. In 44th Annual IEEE Symposium on Foundations of Computer Science, 2003. Proceedings. (pp. 261-270). IEEE Computer Society Press.

Wolf, A., Pedersen, H. B., Lammich, L., Jordon-Thaden, B., Altevogt, S., Domesle, C., Hergenhahn, U., Förstel, M. & Heber, O. (2010). Soft x-ray fragmentation studies of molecular ions. Journal of Physics B: Atomic, Molecular and Optical Physics, 43(19), 194007. https://doi.org/10.1088/0953-4075/43/19/194007

Nielsen, H. & Knudsen, H. (2010). The Troublesome Life of Peaceful Atoms in Denmark. History and Technology, 26(2), 91-118. https://doi.org/10.1080/07341511003750022

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