Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Galloway, J. M., Parsons, M. B., Ardakani, O. H., Falck, H., Fewster, R. E., Swindles, G. T., Sanei, H., Palmer, M. J., Nasser, N. A. & Patterson, R. T. (2024). Organic matter is a predominant control on total mercury concentration of near-surface lake sediments across a boreal to low Arctic tundra transect in northern Canada. Science of the Total Environment, 954, Article 176466. https://doi.org/10.1016/j.scitotenv.2024.176466

Liu, L., Ji, Y., Bianchi, M., Hus, S. M., Li, Z., Balog, R., Miwa, J. A., Hofmann, P., Li, A. P., Zemlyanov, D. Y., Li, Y. & Chen, Y. P. (2024). A metastable pentagonal 2D material synthesized by symmetry-driven epitaxy. Nature Materials, 23(10), 1339-1346. https://doi.org/10.1038/s41563-024-01987-w

Brodal, G. S., Fagerberg, R. & Rysgaard, C. M. (2024). On Finding Longest Palindromic Subsequences Using Longest Common Subsequences. In T. Chan, J. Fischer, J. Iacono & G. Herman (Eds.), 32nd Annual European Symposium on Algorithms, ESA 2024 Article 35 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2024.35

Kruse, T., Garvanska, D. H., Varga, J. K., Garland, W., McEwan, B. C., Hein, J. B., Weisser, M. B., Benavides-Puy, I., Chan, C. B., Sotelo-Parrilla, P., Mendez, B. L., Jeyaprakash, A. A., Schueler-Furman, O., Jensen, T. H., Kettenbach, A. N. & Nilsson, J. (2024). Substrate recognition principles for the PP2A-B55 protein phosphatase. Science Advances, 10(40), eadp5491. Article eadp5491. https://doi.org/10.1126/sciadv.adp5491

Djavani-Tabrizi, I., Lindkvist, T. T., Langeland, J., Kjær, C., Graham, M., Kjaergaard, H. G. & Nielsen, S. B. (2024). Tautomer-Selective Fluorescence Spectroscopy of Oxyluciferin Anions. Journal of the American Chemical Society, 146(39), 26975-26982. https://doi.org/10.1021/jacs.4c08596

Fournais, S., Girardot, T., Junge, L., Morin, L. & Olivieri, M. (2024). Lower bounds on the energy of the Bose gas. Reviews in Mathematical Physics, 36(9), Article 2360004. https://doi.org/10.1142/S0129055X23600048

Gabel, J., Schmidt, S., Pfeuffer, K. & Steinicke, F. (2024). Guiding Handrays in Virtual Reality: Comparison of Gaze- and Object-Based Assistive Raycast Redirection. In S. N. Spencer (Ed.), Proceedings - SUI 2024: ACM Symposium on Spatial User Interaction Article 27 Association for Computing Machinery. https://doi.org/10.1145/3677386.3682080

Fleischhacker, N., Larsen, K. G., Obremski, M. & Simkin, M. (2024). Invertible Bloom Lookup Tables with Less Memory and Randomness. In T. Chan, J. Fischer, J. Iacono & G. Herman (Eds.), 32nd Annual European Symposium on Algorithms, ESA 2024 Article 54 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2024.54

Okholm, T. L. H., Kamstrup, A. B., Nielsen, M. M., Hollensen, A. K., Graversgaard, M. L., Sørensen, M. H., Kristensen, L. S., Vang, S., Park, S. S., Yeo, E., Dyrskjøt, L., Kjems, J., Pedersen, J. S. & Damgaard, C. K. (2024). circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA. eLife, 13, Article RP91783. https://doi.org/10.7554/eLife.91783

Cino, D., Brandsen, S., Bressa, N., Eriksson, E., Mascheroni, G. & Zaman, B. (2022, Jul 1). Young People's Digital Skills Practices in Non- formal Learning Contexts: observations, interviews, co-design. Zenodo. https://doi.org/10.5281/zenodo.6832846

Niu, S., Lu, Z., Zhang, A. X., Cai, J., Griggio, C. F. & Heuer, H. (2023). Building Credibility, Trust, and Safety on Video-Sharing Platforms. In A. Schmidt, K. Väänänen, T. Goyal, P. O. Kristensson & A. Peters (Eds.), Extended Abstracts of the 2023 CHI Conference on Human Factors in Computing Systems, CHI EA 2023, Hamburg, Germany, April 23-28, 2023 (pp. 337:1-337:7). Article 337 ACM. https://doi.org/10.1145/3544549.3573809

Boudgoust, K. & Takahashi, A. (2024). Sequential Half-Aggregation of Lattice-Based Signatures. In G. Tsudik, M. Conti, K. Liang & G. Smaragdakis (Eds.), Computer Security – ESORICS 2023: 28th European Symposium on Research in Computer Security, The Hague, The Netherlands, September 25–29, 2023, Proceedings, Part I (Vol. 1, pp. 270-289). Springer Science+Business Media. https://doi.org/10.1007/978-3-031-50594-2_14

Badrinarayanan, S., Miao, P., Mukherjee, P. & Ravi, D. (2023). On the Round Complexity of Fully Secure Solitary MPC with Honest Majority. In G. N. Rothblum & H. Wee (Eds.), Theory of Cryptography - 21st International Conference, TCC 2023, Taipei, Taiwan, November 29 - December 2, 2023, Proceedings, Part II (Vol. 14370, pp. 124-155). Springer, Cham. https://doi.org/10.1007/978-3-031-48618-0_5

Soureshjani, F. H., Hall-Andersen, M., Jahanara, M., Kam, J., Gorzny, J. & Ahmadvand, M. (2023). Automated Analysis of Halo2 Circuits. In S. Graham-Lengrand & M. Preiner (Eds.), Proceedings of the 21st International Workshop on Satisfiability Modulo Theories (SMT 2023) co-located with the 29th International Conference on Automated Deduction (CADE 2023), Rome, Italy, July, 5-6, 2023 (Vol. 3429, pp. 3-17). CEUR-WS.org. https://ceur-ws.org/Vol-3429/paper3.pdf

Doerner, J., Kondi, Y., Lee, E., Shelat, A. & Tyner, L. (2023). Threshold BBS+ Signatures for Distributed Anonymous Credential Issuance. In 44th IEEE Symposium on Security and Privacy, SP 2023, San Francisco, CA, USA, May 21-25, 2023 (pp. 773-789). IEEE. https://doi.org/10.1109/SP46215.2023.10179470

Sterling, J. (2023). What should a generic object be? Mathematical Structures in Computer Science, 33(1), 46-67. https://doi.org/10.1017/S0960129523000117

Tommasel, A. & Assent, I. (2023). Recommendation fairness and where to find it: An empirical study on fairness of user recommender systems. In J. He, T. Palpanas, X. Hu, A. Cuzzocrea, D. Dou, D. Slezak, W. Wang, A. Gruca, J. C.-W. Lin & R. Agrawal (Eds.), IEEE International Conference on Big Data, BigData 2023, Sorrento, Italy, December 15-18, 2023 (pp. 4195-4204). IEEE. https://doi.org/10.1109/BIGDATA59044.2023.10386616

Quercia, A., Morrison, A., Scharr, H. & Assent, I. (2023). SGD Biased towards Early Important Samples for Efficient Training. In G. Chen, L. Khan, X. Gao, M. Qiu, W. Pedrycz & X. Wu (Eds.), IEEE International Conference on Data Mining, ICDM 2023, Shanghai, China, December 1-4, 2023 (pp. 1289-1294). IEEE. https://doi.org/10.1109/ICDM58522.2023.00163

Moya-Molina, M., Dorgau, B., Flood, E., Letteboer, S. J. F., Lorentzen, E., Coxhead, J., Smith, G., Roepman, R., Nagaraja Grellscheid, S., Armstrong, L. & Lako, M. (2024). Deciphering the impact of PROM1 alternative splicing on human photoreceptor development and maturation. Cell Death & Disease, 15(10), Article 721. https://doi.org/10.1038/s41419-024-07105-7

Amdisen, M. B., Cheng, Y., Jalarvo, N., Pajerowski, D., Brown, C. M., Jensen, T. R. & Andersson, M. S. (2024). The Influence of Reorientational and Vibrational Dynamics on the Mg²⁺ Conductivity in Mg(BH₄)₂·CH₃NH₂. Chemistry of Materials, 36(19), 9784-9792. Article 36. https://doi.org/10.1021/acs.chemmater.4c01947

Aaskov, M. L., Ishimatsu, A., Nyengaard, J. R., Malte, H., Lauridsen, H., Ha, N. T. K., Do Thi, T. H. & Bayley, M. (2024). Modulation of gill surface area does not correlate with oxygen loss in Chitala ornata. Proceedings of the Royal Society B: Biological Sciences, 291(2033), Article 20241884. https://doi.org/10.1098/rspb.2024.1884

Skovsholt, L. J., Matheson, F., Riis, T. & Hawes, I. (2024). Trait-specific groups of aquatic macrophytes respond differently to eutrophication of unshaded lowland streams. Science of the Total Environment, 954, Article 176724. https://doi.org/10.1016/j.scitotenv.2024.176724

Yang, Y., Zhao, R., Liu, C., Qi, Y., Hu, D., Si, D. & Chen, Y. P. (2024). Regulating crystallinity to balance the electrochemical performance of cobalt-tin oxide composite anodes for sodium-ion batteries. New Journal of Chemistry, 48(38), 16657-16668. https://doi.org/10.1039/d4nj02152e

Garland, W. & Jensen, T. H. (2024). Nuclear sorting of short RNA polymerase II transcripts. Molecular Cell, 84(19), 3644-3655. https://doi.org/10.1016/j.molcel.2024.08.024

Mundy, J., Hall, A. S. M., Steinbach, J., Albinaña, C., Agerbo, E., Als, T. D., Thapar, A., McGrath, J. J., Vilhjálmsson, B. J., Nordentoft, M., Werge, T., Børglum, A., Mortensen, P. B. & Musliner, K. L. (2024). Polygenic liabilities and treatment trajectories in early-onset depression: a Danish register-based study. Psychological Medicine, 54(14), 3828-3837. https://doi.org/10.1017/S0033291724002186

Nielsen, S. M., Johnsen, K. K., Hansen, L. B. S., Rikvold, P. D., Møllebjerg, A., Palmén, L. G., Durhuus, T., Schlafer, S. & Meyer, R. L. (2024). Large-scale screening identifies enzyme combinations that remove in situ grown oral biofilm. Biofilm, 8, Article 100229. https://doi.org/10.1016/j.bioflm.2024.100229

Larsen, E. M. H., Brock-Nannestad, T., Skibsted, J., Reinholdt, A. & Bendix, J. (2024). A homoleptic Ag^III complex stabilized by succinimidate ligands. Chemical Science, 15(43), 18067-18075. https://doi.org/10.1039/d4sc04843a

Rasmussen, T. A., Grønbæk, K. & Huang, W. (2024). Supporting tailorability in augmented reality based remote assistance in the manufacturing industry: A user study. Computers & Graphics, 125(Special Section on Advances on SUI), Article 104095. https://doi.org/10.1016/j.cag.2024.104095

Schiøtt, S., Holland, D. M., Holland, D., Rysgaard, S. & Rosing-Asvid, A. (2024). The diet and diving behaviour of the ringed seal (Pusa hispida) in Kangia (Ilulissat Icefjord), Greenland. Polar Biology, 47(12), 1409-1422. https://doi.org/10.1007/s00300-024-03310-4

Butcher, P. W. S., Batch, A., Ritsos, P. D. & Elmqvist, N. (2023). Don't Pull the Balrog - Lessons Learned from Designing Wizualization: a Magic-inspired Data Analytics System in XR. In G. Bruder, A.-H. Olivier, A. Cunningham, E. Y. Peng, J. Grubert & I. Williams (Eds.), Proceedings - 2023 IEEE International Symposium on Mixed and Augmented Reality Adjunct, ISMAR-Adjunct 2023 (pp. 234-237). IEEE. https://doi.org/10.1109/ISMAR-Adjunct60411.2023.00054

Srinivasan, A., Ellemose, J., Butcher, P. W. S., Ritsos, P. D. & Elmqvist, N. (2025). Attention-Aware Visualization: Tracking and Responding to User Perception Over Time. IEEE Transactions on Visualization and Computer Graphics, 31(1), 1017-1027. https://doi.org/10.1109/TVCG.2024.3456300

Kim, J., Lee, H., Nguyen, D. M., Shin, M., Kwon, B. C., Ko, S. & Elmqvist, N. (2025). DG Comics: Semi-Automatically Authoring Graph Comics for Dynamic Graphs. IEEE Transactions on Visualization and Computer Graphics, 31(1), 973-983. https://doi.org/10.1109/TVCG.2024.3456340

Dhanoa, V., Hinterreiter, A., Fediuk, V., Elmqvist, N., Gröller, E. & Streit, M. (2025). D-Tour: Semi-Automatic Generation of Interactive Guided Tours for Visualization Dashboard Onboarding. IEEE Transactions on Visualization and Computer Graphics, 31(1), 721-731. https://doi.org/10.1109/TVCG.2024.3456347

Wili, N., Nielsen, A. B., Carvalho, J. P. & Nielsen, N. C. (2024). Observation of dynamic nuclear polarization echoes. Science Advances, 10(42), Article eadr2420. https://doi.org/10.1126/sciadv.adr2420

Goesten, M. G. & Schoop, L. M. (2024). Diradicals as Topological Charge Carriers in Metal-Organic Toy Model Pt₃(HIB)₂. Journal of the American Chemical Society, 146(43), 29599-29608. https://doi.org/10.1021/jacs.4c09993

Nielsen, L. S., Šantl-Temkiv, T., Palomeque Sánchez, M., Massling, A., Ward, J. C., Jensen, P. B., Boesen, T., Petters, M., Finster, K., Bilde, M. & Rosati, B. (2024). Water Uptake of Airborne Cells of P. syringae Measured with a Hygroscopicity Tandem Differential Mobility Analyzer. Environmental Science & Technology, 58(43), 19211-19221. https://doi.org/10.1021/acs.est.4c01817

Alstrup, A. K. O. & Wang, T. (2024). Evolution ved genom-duplikation. Kaskelot, 253, 8-11.

Mendes, S. B., Olesen, J. M., Memmott, J., Costa, J. M., Timóteo, S., Dengucho, A. L., Craveiro, L. & Heleno, R. (2024). Evidence of a European seed dispersal crisis. Science (New York, N.Y.), 386(6718), 206-211. https://doi.org/10.1126/science.ado1464