Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Guarnieri, P., Tegner, C. & Brooks, C. K. (2024). Structures and Magmatism Associated With a Failed Triple Junction in Traill Ø, East Greenland. Tectonics, 43(9), Article e2023TC007980. https://doi.org/10.1029/2023TC007980

Dahl, J. T., Madsen, B., Treier, U. & Normand, S. (2024). Crop Wild Relatives - Population inventories in Denmark 2023. https://doi.org/10.6084/m9.figshare.25592187.v1

Nielsen, K. H. (2024). Ingeniørkunst på isen. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2024). Mdma afvist. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H., Kaarsted, T., Overgaard, A. K., Okholm, A. L., Martek, A. & Haastrup, M. F. (2024). Transforming research and public libraries into catalysts for citizen science. In ARPHA Proceedings 6: Change – The transformative power of citizen science (Vol. 6, pp. 153-158) https://doi.org/10.3897/ap.e126471

Yaworsky, P. M., Hussain, S. T. & Riede, F. (2024). The effects of climate and population on human land use patterns in Europe from 22ka to 9ka ago. Quaternary Science Reviews, 344, Article 108956. https://doi.org/10.1016/j.quascirev.2024.108956

Xu, J., Hansen, P. J., Nielsen, L. T., Krock, B., Tillmann, U. & Kiørboe, T. (2017). Distinctly different behavioral responses of a copepod, Temora longicornis, to different strains of toxic dinoflagellates, Alexandrium spp. Harmful Algae, 62, 1-9. https://doi.org/10.1016/j.hal.2016.11.020

Nielsen, L. T., Hallegraeff, G. M., Wright, S. W. & Hansen, P. J. (2012). Effects of experimental seawater acidification on an estuarine plankton community. Aquatic Microbial Ecology, 65(3), 271-285. https://doi.org/10.3354/ame01554

Schøn, M. L., Mikkelsen, M. V. N., Jensen, K., Poulsen, J. M., Nørgaard, J. V. & Overgaard, J. (2023). 2x Preliminary results from respirometry experiments with black soldier fly larvae (BSFL). Poster session presented at ENORM Biofactory - Grand opening - Grand Opening af vores nye produktionsfaciliteter med en produktionskapacitet på 100 ton insekter om dagen, Flemming, Denmark.

Wang, T. & Berenbrink, M. (2024). Rapid restoration of intracellular pH in erythrocytes protects oxygen transport. Acta Physiologica, 240(10), Article e14218. https://doi.org/10.1111/apha.14218

The ALPHA Collaboration (2024). Adiabatic expansion cooling of antihydrogen. Physical Review Research , 6(3), Article L032065. https://doi.org/10.1103/PhysRevResearch.6.L032065

Cossu, G., Sechi, D., Sohbati, R., Murray, A., Pascucci, V. & Andreucci, S. (2024). Luminescence dating of rock surfaces in challenging environments: The case of MIS5e gravelly transgressive lag deposit (Southern Sardinia, West Mediterranean Sea). Quaternary Geochronology, 85, Article 101630. https://doi.org/10.1016/j.quageo.2024.101630

Jensen, A. B. & Elm, J. (2024). Massive Assessment of the Geometries of Atmospheric Molecular Clusters. Journal of Chemical Theory and Computation, 20(19), 8549–8558. https://doi.org/10.1021/acs.jctc.4c01046

Newburger, E. & Elmqvist, N. (2024). Visualization According to Statisticians: An Interview Study on the Role of Visualization for Inferential Statistics. IEEE Transactions on Visualization and Computer Graphics, 30(1), 230-239. https://doi.org/10.1109/TVCG.2023.3326521

Hoque, M. N. & Elmqvist, N. (2024). Dataopsy: Scalable and Fluid Visual Exploration using Aggregate Query Sculpting. IEEE Transactions on Visualization and Computer Graphics, 30(1), 186-196. https://doi.org/10.1109/TVCG.2023.3326594

Batch, A., Butcher, P. W. S., Ritsos, P. D. & Elmqvist, N. (2024). Wizualization: A 'Hard Magic' Visualization System for Immersive and Ubiquitous Analytics. IEEE Transactions on Visualization and Computer Graphics, 30(1), 507-517. https://doi.org/10.1109/TVCG.2023.3326580

Maliuk, A., Marghoub, A., Williams, C. J. A., Stanley, E., Kéver, L., Vickaryous, M., Herrel, A., Evans, S. E. & Moazen, M. (2024). Comparative analysis of osteoderms across the lizard body. Anatomical record (Hoboken, N.J. : 2007), 307(10), 3191-3203. https://doi.org/10.1002/ar.25418

Nguyen, M. T. A., Andersen, E. S. & Pothoulakis, G. (2025). Construction of Small Genes with Repetitive Elements Using Oligo Extension and Golden Gate Assembly. In D. Schindler (Ed.), Golden Gate Cloning (pp. 219-227). Humana Press. https://doi.org/10.1007/978-1-0716-4220-7_12

Joyce, W., He, K., Zhang, M., Ogunsola, S., Wu, X., Joseph, K. T., Bogomolny, D., Yu, W., Springer, M. S., Xie, J., Signore, A. V. & Campbell, K. L. (2024). Genetic excision of the regulatory cardiac troponin I extension in high-heart rate mammal clades. Science (New York, N.Y.), 385(6716), 1466-1471. https://doi.org/10.1126/science.adi8146

Steininger, F., Palmfeldt, J., Koren, K. & Kalinichev, A. V. (2024). Exploiting the pH-Cross Sensitivity of Ion-Selective Optodes to Broaden Their Response Range. ACS Sensors, 9(9), 4555-4559. https://doi.org/10.1021/acssensors.4c01481

Schwendt, G., Kalinichev, A. V., Borisov, S. M. & Koren, K. (2024). Simultaneous Imaging of Temperature and Oxygen by Utilizing Thermally Activated Delayed Fluorescence and Phosphorescence of a Single Indicator. ACS Measurement Science Au, 4(5), 568-576. https://doi.org/10.1021/acsmeasuresciau.4c00040

Serpell, L. C., Otzen, D. & Radford, S. E. (2024). Expanding the Protein Universe. Journal of Molecular Biology, 436(21), 168812. Article 168812. https://doi.org/10.1016/j.jmb.2024.168812

Wang, C., Liu, L., Yin, M., Eller, F., Brix, H., Wang, T., Salojärvi, J. & Guo, W. (2024). Genome-wide analysis tracks the emergence of intraspecific polyploids in Phragmites australis. npj biodiversity, 3(1), Article 29. https://doi.org/10.1038/s44185-024-00060-8

Crossley, J. L., Elsey, R., Crossley, D. A., Wang, T. & Hicks, J. W. (2024). There is no limitation for CO2 excretion across the lung in exercising American alligators (Alligator mississippiensis). The Journal of experimental biology, 227(18), Article jeb248139. https://doi.org/10.1242/jeb.248139

Castanheira, E. J., Maia, J. R., Monteiro, L. P. G., Sobreiro-Almeida, R., Wittig, N. K., Birkedal, H., Rodrigues, J. M. M. & Mano, J. F. (2024). 3D-printed injectable nanocomposite cryogel scaffolds for bone tissue regeneration. Materials Today Nano, 28, Article 100519. https://doi.org/10.1016/j.mtnano.2024.100519

Wightman, T., Muszyński, A., Kelly, S. J., Sullivan, J. T., Smart, C. J., Stougaard, J., Ferguson, S., Azadi, P. & Ronson, C. W. (2024). Rhizobial Secretion of Truncated Exopolysaccharides Severely Impairs the Mesorhizobium-Lotus Symbiosis. Molecular plant-microbe interactions : MPMI, 37(9), 662-675. https://doi.org/10.1094/MPMI-03-24-0024-R

Chakraborty, M., Gnanakumar, A., Sridharan, M. & Møller, A. (2024). Indirection-Bounded Call Graph Analysis. In J. Aldrich & G. Salvaneschi (Eds.), 38th European Conference on Object-Oriented Programming, ECOOP 2024 Article 3 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ECOOP.2024.10

Chiaramonti, D., Lehmann, J., Berruti, F., Giudicianni, P., Sanei, H. & Masek, O. (2024). Biochar is a long-lived form of carbon removal, making evidence-based CDR projects possible. Biochar, 6(1), Article 81. https://doi.org/10.1007/s42773-024-00366-7

Kim, S. W., Lee, H., Song, D. Y., Lee, G. H., Ji, J., Park, J. W., Han, J. H., Lee, J. W., Byun, H. J., Son, J. H., Kim, Y. R., Lee, Y., Kim, J., Jung, A., Lee, J., Kim, E., Kim, S. H., Lee, J. H., Satterstrom, F. K. ... An, J. Y. (2024). Whole genome sequencing analysis identifies sex differences of familial pattern contributing to phenotypic diversity in autism. Genome Medicine, 16(1), Article 114. https://doi.org/10.1186/s13073-024-01385-6

Villalva, P. (2024). Commentary to: An integrated historical study on human–tiger interactions in China. Integrative Conservation, 3(3), 149-151. https://doi.org/10.1002/inc3.63

Palviainen, M., Puutio, J., Østergaard, R. H., Eble, J. A., Maaninka, K., Butt, U., Ndika, J., Kari, O. K., Kamali-Moghaddam, M., Kjaer-Sorensen, K., Oxvig, C., Aransay, A. M., Falcon-Perez, J. M., Federico, A., Greco, D., Laitinen, S., Hayashi, Y. & Siljander, P. R. M. (2024). Beyond basic characterization and omics: Immunomodulatory roles of platelet-derived extracellular vesicles unveiled by functional testing. Journal of Extracellular Vesicles, 13(10), Article e12513. https://doi.org/10.1002/jev2.12513

Bose, B., Carrilho, P., Marinucci, M., Moretti, C., Pietroni, M., Carella, E., Piga, L., Wright, B. S., Vernizzi, F., Carbone, C., Casas, S., D'Amico, G., Frusciante, N., Koyama, K., Pace, F., Pourtsidou, A., Baldi, M., De La Bella, L. F., Fiorini, B. ... Vergani, D. (2024). Euclid preparation: XLIV. Modelling spectroscopic clustering on mildly nonlinear scales in beyond-ΛCDM models. Astronomy and Astrophysics, 689, Article A275. https://doi.org/10.1051/0004-6361/202348784

Sonne, C., Jenssen, B. M., Ciesielski, T. M., Vorkamp, K. & Dietz, R. (2024). Time to reboot circumarctic One Health collaboration. The Lancet, 404(10460), 1304. https://doi.org/10.1016/S0140-6736(24)01611-8

Roohi, M., Mirzajani, S., Haghighi, A. R. & Basse-O’Connor, A. (2024). Robust Design of Two-Level Non-Integer SMC Based on Deep Soft Actor-Critic for Synchronization of Chaotic Fractional Order Memristive Neural Networks. Fractal and Fractional, 8(9), Article 548. https://doi.org/10.3390/fractalfract8090548

Rasmussen, T. L., El Bani Altuna, N. & Thomsen, E. (2024). Variations in deep-sea methane seepage linked to millennial-scale changes in bottom water temperatures ~ 50-6 ka, NW Svalbard margin. Scientific Reports, 14(1), 22184. Article 22184. https://doi.org/10.1038/s41598-024-72865-3

Årdal, M. A., Adj, G., Alblooshi, A., Aranha, D. F., A. Canales-Martínez, I., Chavez-Saab, J., Gazzoni Filho, D. L., Reijnders, K. & Rodriguez-Henriquez, F. (2025). Optimized One-Dimensional SQIsign Verification on Intel and Cortex-M4. IACR Transactions of Cryptographic Hardware and Embedded Systems, 2025(1), 497-522. https://doi.org/10.46586/tches.v2025.i1.497-522

Galata, S., Walkington, I., Lane, T. P., Kiriakoulakis, K. & Dick, J. (2024). Rapid detection of microfibres in environmental samples using open-source visual recognition models. Journal of Hazardous Materials, 480, Article 135956. https://doi.org/10.1016/j.jhazmat.2024.135956

Babizhetskyy, V., Myakush, O., Kotur, B., Zheng, C., Smetana, V. & Mudring, A. V. (2024). Ternary gallide Zr₇Pd_7–xGa_3+x (0 ≤ x ≤ 1.8): Synthesis, crystal and electronic structures. Journal of Solid State Chemistry, 340, Article 125034. https://doi.org/10.1016/j.jssc.2024.125034

Sokołowska, N. & ISOLDE Collaboration (2024). Decay study of Be 11 with an optical time-projection chamber. Physical Review C, 110(3), Article 034328. https://doi.org/10.1103/PhysRevC.110.034328

Mezzomo, P., Leong, J. V., Vodrážka, P., Moos, M., Jorge, L. R., Volfová, T., Michálek, J., de L. Ferreira, P., Kozel, P., Sedio, B. E. & Volf, M. (2024). Variation in induced responses in volatile and non-volatile metabolites among six willow species: Do willow species share responses to herbivory? Phytochemistry, 226, Article 114222. https://doi.org/10.1016/j.phytochem.2024.114222

Stubkjær, R. B., Thorup, P. S., Jo̷rgensen, L. R., Roelsgaard, M., Fischer, K. F. F., Dippel, A. C. & Iversen, B. B. (2024). In Operando X-ray Diffraction Study of Thermoelectric Cu₂Se. Chemistry of Materials, 36(18), 8782-8791. https://doi.org/10.1021/acs.chemmater.4c01487

Wray, K. B. (2024). A hobbit’s guide to technology ethics: A review of S. Umbrello's Technology Ethics. Metascience, 33(3), 467-469. https://doi.org/10.1007/s11016-024-01011-6

Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Aguilar-Trigueros, C. A., Andrew, N. R., Babiy, U. V., Bao, T., Bazzano, G., Bondarchuk, S. N., Bonebrake, T. C., Brennan, G. L., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E. K., Chapurlat, E., Creer, S. ... Ovaskainen, O. (2024). Airborne DNA reveals predictable spatial and seasonal dynamics of fungi. Nature, 631(8022), 835-842. https://doi.org/10.1038/s41586-024-07658-9

Damsgård, J. F., Hansen, T. M., Voss, P. H., Hansen, H., Steffansen, S., Nørmark, E. & Fyhn, M. (2024). Subsurface characterization using Distributed Acoustic Sensing (DAS) on an offshore fiber between Denmark and Norway. Poster session presented at EGU General Assembly 2024, Vienna, Austria. https://doi.org/10.5194/egusphere-egu24-414

Jiang, Y., Kleinau, J., Eckroth, T. M., Hoggan, E., Mueller, S. & Wessely, M. (2024). MouthIO: Fabricating Customizable Oral User Interfaces with Integrated Sensing and Actuation. In UIST '24 - The 37th Annual ACM Symposium on User Interface Software and Technology Article 1 Association for Computing Machinery. https://doi.org/10.1145/3654777.3676443

Luize, B. G., Tuomisto, H., Ekelschot, R., Dexter, K. G., Amaral, I. L. D., Coelho, L. D. S., Matos, F. D. D. A., Lima Filho, D. D. A., Salomão, R. P., Wittmann, F., Castilho, C. V., Carim, M. D. J. V., Guevara, J. E., Phillips, O. L., Magnusson, W. E., Sabatier, D., Cardenas Revilla, J. D., Molino, J. F., Irume, M. V. ... Ter Steege, H. (2024). The biogeography of the Amazonian tree flora. Communications Biology, 7(1), Article 1240. https://doi.org/10.1038/s42003-024-06937-5