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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Sørensen, J., Kronborg, C., Nielsen, O. B. & Krohn, C. F. (2006). SeSam rapport 06FY-01, Nyborg. Geologisk Institut, Aarhus Universitet.
Negrini, R., Nijman, I. J., Milanesi, E., Moazami-Goudarzi, K., Williams, J. L., Erhardt, G., Dunner, S., Rodellar, C., Valentini, A., Bradley, D. G., Olsaker, I., Kantanen, J., Ajmone-Marsan, P., Lenstra, J. A., Laloë, D., Wiener, P., Burton, D., Weimann, C., Harlizius, B. ... Felius, M. (2007). Differentiation of European cattle by AFLP fingerprinting. Animal Genetics, 38, 60-66. https://doi.org/10.1111/j.1365-2052.2007.01554.x
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05NJ-01, Hobro og Onsild. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05NJ-02, Brønderslev. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2006). SeSam rapport 06NJ-09, Nørager. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05RK-01, Holstebro Syd. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05RK-02, Holstebro By. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05RK-03, Lybæk. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2005). SeSam rapport 05RK-04, Bording. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2006). SeSam rapport 06RK-02, Klosterhede, 2 boringer. Geologisk Institut, Aarhus Universitet.
Krohn, C. F., Kronborg, C., Nielsen, O. B. & Sørensen, J. (2006). SeSam rapport 06RK-01, Holstebro Nybobakke. Geologisk Institut, Aarhus Universitet.
Li, S., Ma, L., Li, H., Vang, S., Hu, Y., Bolund, L. & Wang, J. (2007). Snap: An Integrated SNP Annotation Platform. Nucleic Acids Research, 35, D707-D710. https://doi.org/10.1093/nar/gkl969
Gilbert, MTP., Binladen, J., Miller, W., Wiuf, C., Willerslev, E., Poinar, H., Carlson, JE., Leebens-Mack, JH. & Schuster, SC. (2007). Recharacterisation of ancient DNA miscoding lesions: Insights in the era of the sequencing-by-synthesis. Nucleic Acids Research, 35(1), 1-10. https://doi.org/10.1093/nar/gkl483
Hebsgaard, MB., Wiuf, C., Gilbert, MTP., Glenner, H. & Willerslev, E. (2007). Evaluating Neandertal genetics and phylogeny. J. Mol. Evol., 64, 50-60. https://doi.org/10.1007/s00239-006-0017-y
Nielsen, K. H. (2006). 100 års videnskabsformidling. In R. S. Kjærgaard (Ed.), Elfenbenstårnet: Universiteter mellem forskning og formidling (pp. 35-54). Aarhus Universitetsforlag.
Kristensen, S. (2006). Badly approximable systems of linear forms over a field of formal series. Journal de Theorie des Nombres de Bordeaux, 18(2), 421-444.
Christensen-Dalsgaard, J. (2001). Stellar evolution. In Encyclopedia of Astronomy and Astrophysics (pp. 3082). Institute of Physics Press.
Christensen-Dalsgaard, J. (2001). Solar Interior: Helioseismology Theory. In Encyclopedia of Astronomy and Astrophysics (pp. 1078). Institute of Physics Press.
de Silva, E., Thorne, T., Ingram, P., Agrafioti, I., Swire, J., Wiuf, C. & Stumpf, MPH. (2006). The effects of incomplete protein interaction data on structural and evolutionary inferences. BMC Biology, 4(39). https://doi.org/10.1186/1741-7007-4-39
Kelic, E., Zinner, N. T., Kolbe, E., Langanke, K. & Schmidt, K.-H. (2005). Cross Sections and Fragment Distributions from Neutrino-induced Fission on r-process Nuclei. Physics Letters B, 616(1-2), 48-58.
Fröhlich, C., Hauser, P., Liebendörfer, M., Martinez-Pinédo, G., Thielemann, F.-K., Bravo, E., Zinner, N. T., Hix, W. R., Langanke, K., Mezzacappa, A. & Nomoto, K. (2006). Composition of the Innermost Core Collapse Supernova Ejecta. Astrophysical Journal, 637, 415-426.
Wiuf, C., Laidlaw, Z. & Stumpf, MPH. (2003). Some notes on the combinatorial properties of haplotype tagging. Math. Biosci., 185, 205-216.
Fröhlich, C., Martinez-Pinédo, G., Liebendörfer, M., Thielemann, F.-K., Bravo, E., Hix, W. R., Langanke, K. & Zinner, N. T. (2006). Neutrino-induced Nucleosynthesis of A>64 Nuclei: The vp-process. Physical Review Letters, 96, 142502.
Zinner, N. T., Vogel, P. & Langanke, K. (2006). Muon Capture on Nuclei: Random Phase Approximation Evaluation versus Data for Z≤6≤94 Nuclei. Physical Review C - Nuclear Physics, 74, 024326.
Hansen, AJ., Mitchell, D., Wiuf, C., Paniker, L., Brand, TB., Binladen, J., Gilichinsky, DA., Rønn, R. & Willerslev, E. (2006). Crosslinks rather than Strand Breaks Determine Access to Ancient DNA Sequences from Frozen Sediments. Genetics, 173, 1175-1179. https://doi.org/10.1534/genetics.106.057349
Wiuf, C., Brameier, M., Hagberg, O. & Stumpf, MPH. (2006). A likelihood approach to analysis of network data. Proceedings of the National Academy of Sciences (PNAS), 103(20), 7566-7570.
Willerslev, E., Hansen, AJ., Binladen, J., Brand, TB., Gilbert, MTP., Shapiro, B., Bunce, M., Wiuf, C., Gilichinsky, DA. & Cooper, A. (2003). Diverse plant and animal genetic records from holocene and pleistocene sediments. Kexue (Shanghai), 300, 791-795.
Posada, D. & Wiuf, C. (2003). Simulating haplotype blocks in the human genome. Bioinformatics, 19(2), 289-290.
Wiuf, C. (2001). Recombination in human mitochondrial DNA? Genetics, 159, 749-756.
Wiuf, C., Christensen, T. & Hein, J. (2001). A simulation study of the reliability of recombination detection methods. Mol. Biol. Evol., 18, 1929-1939.
Wiuf, C. (2001). Rare Alleles and Selection. Theoretical Population Biology, 59(4), 287-296. https://doi.org/10.1006/tpbi.2001.1523
Hansen, AJ., Willerslev, E., Wiuf, C., Mourier, T. & Arctander, P. (2001). Statistical evidence for miscoding lesions in ancient DNA templates. Mol. Biol. Evol., 18, 262-265.
Strimmer, K., Wiuf, C. & Moulton, V. (2001). Recombination analysis using directed graphical models. Mol. Biol. Evol., 18, 97-99.

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Fago, A., Dalsgaard, T. & Simonsen, U. (2006). Hemoglobin as a nitrite reductase: A vasodilation study. In International Visions on Blood Substitutes. - Hemoglobin-based Oxygen Carriers: from Chemistry to Clinic. September 17th-20th, 2006. -  Department of Biochemistry and Molecular Biology, University of Parma, Italy. (pp. 51)
Dalsgaard, T., Simonsen, U. & Fago, A. (2006). Hemoglobin has a limited effect on nitrite-dependent vasodilation in hypoxia. In Posters/Nitric Oxide 14. Fourth International Conference, 25-29 June, 2006. (pp. A73)
Biddle, J., Lipp, J. S., Lever, M., Lloyd, K., Sørensen, K. B., Anderson, R., Fredricks, HF., Elvert, M., Kelly, TJ., Schrag, DP., Sogin, ML., Brenchley, JE., Teske, A., House, CH. & Hinrichs, KU. (2006). Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru. Proceedings of the National Academy of Sciences (PNAS), 103, 3846-3851.
Norup, M. V., Dransfield, J., Chase, M. W., Barfod, A., Fernando, E. S. & Baker, W. J. (2006). Homoplasious character combinations and generic delimitation: a case study from the Indo-Pacific arecoid palms (Arecaceae: Areceae). American Journal of Botany, 93(7), 1065-1080.
Nielsen, E. E., Bach, L. & Kotlicki, P. (2006). HYBRIDLAB (version 1.0): A program for generating simulated hybrids from population samples. Molecular Ecology Resources, 6(4), 971-973.
Wang, T. & Jensen, N. S. (2006). Hypoxia in reptiles. In Fish physiology, toxicology, and water quality. Proceedings of the eighth international symposium, Chongqing, China, 12-14 October, 2004 (pp. 127-138)
Svenning, J.-C. & Skov, F. (2006). Ice age legacies in the geographic distribution of tree species richness in Europe. Poster session presented at Ice age legacies in the geographic distribution of tree species richness in Europe.
Simon, M. J., Wahlberg, M. & Miller, L. A. (2006). Icelandic killer whales (Orcinus orca) use a pulsed call suitable for manipulating the schooling behaviour of herring (Clupea harengus). Bioacoustics - the International Journal of Animal Sound and its Recording, 16, 57-74.
Kvist, L. P., Kristensen, S. B., Rasmussen, H. B., Mejia, C. K. & Gonzalez, H. A. (2006). Identification and evaluation of Peruvian plants used to reat malaria and leishmaniasis. Journal of Ethnopharmacology, 106, 390-402.
Schwermer, C. U., Krieger, B., Lavik, G., Schramm, A., van Rijn, J., de Beer, D., Minz, D., Cyctryn, E., Kuypers, M. M. M. & Gieseke, A. (2006). Impact of Sulfide on Nitrate Conversion in Eutrophic Nitrate-Rich Marine Sludge. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 266). International Society for Microbial Ecology.
Kristensen, T. N., Sørensen, J. G. & Sørensen, A. C. (2006). Indavl hos husdyr. Jyllands-Posten, Indblik, 12.
Arias, C. A. & Brix, H. (2006). Innovative developments for improving performance of vertical flow constructed wetland systems. In Abstracts - 1st Annual Meeting of the Society of Wetland Scientists - Europe  "Integrating our approaches to wetland Science". Bangor, Wales 5 - 7 January 2006
Maklakov, A. A., Bilde, T. & Lubin, Y. (2006). Inter-sexual combat and resource allocation into body parts in the spider, Stegodyphus lineatus. Ecological Entomology, 31, 564-567.
Balslev, H. (2006). Introducción. In M. Moraes, B. Øllgaard, L. P. Kvist, F. Borchsenius & H. Balslev (Eds.), Botánica Económica de los Andes Centrales
Ingvardsen, S. (2006). Kæmpebakterien Thioploca. Naturens Verden, 89, 21-25.
Øllgaard, B. (2006). Karsporeplanter. In S. Frederiksen, F. Rasmussen & O. Seberg (Eds.), Dansk Flora (pp. 31-57). Gyldendal.
Bach, L. A., Thomsen, R., Pertoldi, C. & Loeschcke, V. (2006). Kin competition and the evolution of dispersal in an individual-based model. Ecological Modelling, 192, 658-666.
Ouoba, P., Lykke, A. M., Boussim, J. & Guinko, S. (2006). La flore médicinale de la Foret Classèe de Niangoloko (Burkina Faso). Etudes flor. vég. Burkina Faso, 10, 5-16.
Kvist, L. P., Skog, L. E., Amaya-Márquez, M. & Salinas, I. (2006). Las Gesneriaceae de Perú. Arnaldoa, 12(1-2), 16-40.
Bowden, W. B., Glime, J. M. & Riis, T. (2006). Macrophytes and bryophytes. In F. R. Hauer & G. A. Lambertini (Eds.), Methods in stream ecology (2 ed., pp. 381-414). Academic Press.
Larned, S. T., Suren, A. M., Flanagan, M., Biggs, B. J. F. & Riis, T. (2006). Macrophytes in urban stream rehabilitation: establishment, ecological effects, and public perception. Restoration Ecology, 14(3), 429-440.
Christensen-Dalsgaard, K. K., Fournier, M., Ennos, A. R. & Barfod, A. S. (2006). Mechanical constraints on the hydraulic architecture of tropical trees. Abstract from Plant Biomechanics conference, Stockholm, Sweden.
Campbell, K. L. & Weber, R. E. (2006). Mechanisms and evolution of 'temperature insensitive' hemoglobins in the Family Talpidae. In First International Congress of Respiratory Biology ICRB. - Bonn/Bad Honnef, August 13th - August 16th, 2006 (pp. 97)
Groffman, P. M., Altabet, M. A., Böhlke, J. K., Buttenbach-Bahl, K., David, M. B., Firestone, M. K., Giblin, A. E., Kana, T. M., Nielsen, L. P. & Voytek, M. A. (2006). Methods for measuring denitrification: Diverse approaches to a difficult problem. Ecological Applications, 16(6), 2091–2122.