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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kraft, S. D., Mikosch, J., Staanum, P., Deiglmayr, J., Lange, J., Fioretti, A. & Wester, R. (2007). A high-resolution time-of-flight mass spectrometer for the detection of ultracold molecules. Appl. Phys. B, 89(453).

Johnson, M., Hickmott, L. S., Aguilar Soto, N. & Madsen, P. T. (2008). Echolocation behaviour adapted to prey in foraging Blainville's beaked whale (Mesoplodon densirostris). Proceedings of the Royal Society B: Biological Sciences, 275(1631), 133-139. https://doi.org/10.1098/rspb.2007.1190

Madsen, I. (2006). The mapping class group and homotopy theory. In B. Farb (Ed.), Problems on mapping class groups and related topics (pp. 91-95). American Mathematical Society.

Wilson, M., Hanlon, R. T., Tyack, P. L. & Madsen, P. T. (2007). Intense ultrasonic clicks from echolocating toothed whales do not elicit anti-predator responses or debilitate the squid Loligo pealeii. Biology Letters, 3(3), 225-227. https://doi.org/10.1098/rsbl.2007.0005

Kristensen, T. N., Barker, J. S. F., Pedersen, K. S. & Loeschcke, V. (2008). Extreme temperatures increase the deleterious consequences of inbreeding under laboratory and semi-natural conditions. Proceedings of the Royal Society B: Biological Sciences, 275(1646), 2055-2061. https://doi.org/10.1098/rspb.2008.0426

Nielsen, L., Lindsay, K., Faber, J., Nielsen, N. C. & Skrydstrup, T. (2007). Stereocontrolled Synthesis of Methyl Silanediol Peptide Mimics. Journal of Organic Chemistry, 72, 10035-10044.

Madsen, J. (2007). Strangelets, Nuclearites, Q-balls - A Brief Overview. In C. de los Heros (Ed.), Proc. of the First Workshop on Exotic Physics with Neutrino Telescopes (pp. 57-62). Uppsala University Press.

Giddens, A. C., Nielsen, L., Boshoff, H. I., Tasdemir, D., Perozzo, R., Kaiser, M., Wang, F., Sacchettini, J. C. & Copp, B. R. (2007). Natural product inhibitors of fatty acid biosynthesis: synthesis of the marine microbial metabolites pseudopyronines A and B and evaluation of their anti-infective activities. Tetrahedron, 64, 1242-1249.

Nielsen, L., Lindsay, K. & Skrydstrup, T. (2008). Synthesis of Silanediol Peptide Mimics. Poster session presented at 15^thEuropean Symposium on Organic Chemistry, Dublin, Ireland.

Onnis-Hayden, A., Dair, D., Johnson, C., Schramm, A. & Gu, A. Z. (2007). Kinetics And Nitrifying Populations In Nitrogen Removal Processes At A Full-Scale Integrated Fixed-Film Activated Sludge (IFAS) Plant. In Proceeding of the 80th Annual Water Environmental Federation (WEF) Conference and Exposition Water Environmental Federation.

Davidson, S. K., Schramm, A., An, F. & Stahl, D. A. (2008). Bacterial Symbionts of Earthworm Nephridia: Acidovorax-like Bacteria and Discovery of a Second Putative Bacterial Symbiont in Eisenia fetida. Abstract from ASM Conferences: Beneficial Microbes, Lake Tahoe, United States.

Hansen, S. G. & Skrydstrup, T. (2007). A simple procedure to 3,6-dibenzoylated glucosamine derivatives. Potential building blocks for oligochitosan synthesis. Eur. J. Org. Chem., 3392-3401.

Johannesen, S. A., Pedersen, B. O., Duus, J. Ø. & Skrydstrup, T. (2007). Studies directed to understanding the structure of chitosan-metal complexes: investigations of mono- and disaccharide models with platinum (II) group metals. Inorg. Chem., 4326-4335.

Ejskjaer, K., Sørensen, B. S., Poulsen, S. S., Forman, A., Nexø, E. & Mogensen, O. (2007). Expression of the epidermal growth factor system in endometrioid endometrial cancer. Gynecologic Oncology, 104(1), 158-167. https://doi.org/10.1016/j.ygyno.2006.07.015, https://doi.org/10.1016/j.ygyno.2006.07.015

Mørkbak, A. L., Ramlau-Hansen, C. H., Møller, U. K., Henriksen, T. B., Møller, J. & Nexø, E. (2006). A longitudinal study of serum cobalamins and its binding proteins in lactating women. European Journal of Clinical Nutrition, 61(2), 184-9. https://doi.org/10.1038/sj.ejcn.1602502

Johannesen, S. A., Sinou, D., Framery, E. & Skrydstrup, T. (2007). Evaluation of disaccharide-based ligands for Pd(0)-catalyzed assymetric allylations. Tetrahedron Letters, 48, 3569-3573.

Taaning, R. & Skrydstrup, T. (2007). (S)-4-Benzyl-2-oxazolidinone. In Encyclopedia on Reagents for Organic Synthesis (pp. www3.interscience.wiley.com/cgi-bin/mrwhome/104554785/HOME). Wiley.

Laursen, K. B., Mielke, E., Iannaccone, P. & Füchtbauer, E.-M. (2007). Mechanism of transcriptional activation by the proto-oncogene twist1. Journal of Biological Chemistry, 282, 34623-34633.

Karring, H., Valnickova, Z., Thøgersen, I., Hedegaard, CJ., Møller-Pedersen, T., Kristensen, T., Klintworth, GK. & Enghild, J. J. (2007). Evidence against a blood derived origin for transforming growth factor beta induced protein in corneal disorders caused by mutations in the TGFBI gene. Molecular Vision.

Thaysen-Andersen M, M., Thøgersen, I., Lademann, U., Offenberg, H., Giessing, AM., Enghild, J. J., Nielsen, HJ., Brünner, N. & Højrup P., P. (2007). Investigating the biomarker potential of glycoproteins using comparative glycoprofiling - application to tissue inhibitor of metalloproteinases-1. Biochim. Biophys. Acta.

Knudsen, H. (2007). "Den største Tyskerven og Nazist blandt vore Industribaroner": - om Thorkild Juncker, direktør for Aarhus Oliefabrik. In J. T. Lauridsen (Ed.), Over stregen - under besættelsen (pp. 410-433). Gyldendal.

Jacobsen, J., Visse, R., Sørensen, HP., Enghild, J. J., Brew, K., Wewer, UM. & Nagase, H. (2008). Catalytic Properties of ADAM12 and Its Domain Deletion Mutants. Biochemistry.

Mallorquí-Fernández, N., Manandhar, SP., Mallorquí-Fernández, G., Usón, I., Wawrzonek, K., Kantyka, T., Solà, M., Thøgersen, I., Enghild, J. J., Potempa, J. & Gomis-Rüth, FX. (2008). A New Autocatalytic Activation Mechanism for Cysteine Proteases Revealed by Prevotella intermedia Interpain A. Journal of Biological Chemistry.

Knudsen, H. & Klostergaard, L. (2007). Freakshow, realityshow eller pedalsport. Information, 1. http://www.information.dk/144658

Kliment, CR., Tobolewski, JM., Manni, ML., Tan, RJ., Enghild, J. J. & Oury, TD. (2008). Extracellular superoxide dismutase protects against matrix degradation of heparan sulfate in the lung. Antioxidants & Redox Signaling.

Knudsen, H. (2007). Maskinerne i haven: tre erindringsbaserede rundrejser i Danmarks nukleare landskab. http://www.risoe.dk/rispubl/art/2007_256.pdf

Abildgaard, L., Engberg, R., Pedersen, K., Schramm, A. & Højberg, O. (2006). Sequence variation among Alpha-toxin of Clostridium perfringens strains isolated from diseased and healthy chickens. In RRI-INRA Gut Microbiology 2006: Proceedings of the 5th Biennial Meeting Research to Improve Health, Immune Response and Nutrition

Hebelstrup, K. H. & Jensen, E. Ø. (2008). Expression of NO scavenging hemoglobin is involved in the timing of bolting in Arabidopsis thaliana. Planta, 227(4), 917-27. https://doi.org/10.1007/s00425-007-0667-z

Christiansen, H., Hansen, A. C., Vijn, I., Pallisgaard, N., Larsen, K., Yang, W. C., Bisseling, T., Marcker, K. A. & Jensen, E. Ø. (1996). A novel type of DNA-binding protein interacts with a conserved sequence in an early nodulin ENOD12 promoter. Plant Molecular Biology, 32(5), 809-21.

Anderson, C. R., Jensen, E. O., LLewellyn, D. J., Dennis, E. S. & Peacock, W. J. (1996). A new hemoglobin gene from soybean: a role for hemoglobin in all plants. Proceedings of the National Academy of Sciences (PNAS), 93(12), 5682-7.

Laursen, N. B., Larsen, K., Knudsen, J. Y., Hoffmann, H. J., Poulsen, C., Marcker, K. A. & Jensen, E. O. (1994). A protein binding AT-rich sequence in the soybean leghemoglobin c3 promoter is a general cis element that requires proximal DNA elements to stimulate transcription. Plant Cell, 6(5), 659-68. https://doi.org/10.1105/tpc.6.5.659

Metz, B. A., Welters, P., Hoffmann, H. J., Jensen, E. O. & Schell, J. (1988). Primary structure and promoter analysis of leghemoglobin genes of the stem-nodulated tropical legume Sesbania rostrata: conserved coding sequences, cis-elements and trans-acting factors. Molecular Genetics and Genomics, 214(2), 181-91.

Jensen, E. Ø., Marcker, K. A., Schell, J. & de Bruijn, F. J. (1988). Interaction of a nodule specific, trans-acting factor with distinct DNA elements in the soybean leghaemoglobin Ibc(3) 5' upstream region. E M B O Journal, 7(5), 1265-1271.

Konieczny, A., Jensen, E. O., Marcker, K. A. & Legocki, A. (1987). Molecular cloning of lupin leghemoglobin cDNA. Molecular Biology Reports, 12(1), 61-6.

Jensen, E. O., Marcker, K. A. & Villadsen, IS. (1986). Heme regulates the expression in Saccharomyces cerevisiae of chimaeric genes containing 5'-flanking soybean leghemoglobin sequences. E M B O Journal, 5(5), 843-7.

Marcker, A., Lund, M., Jensen, E. Ø. & Marcker, K. A. (1984). Transcription of the soybean leghemoglobin genes during nodule development. E M B O Journal, 3(8), 1691-1695.

Bojsen, K., Abildsten, D., Jensen, E. Ø., Paludan, K. & Marcker, K. A. (1983). The chromosomal arrangement of six soybean leghemoglobin genes. E M B O Journal, 2(7), 1165-1168.

Wiborg, O., Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K. & Marcker, K. A. (1983). The structure of an unusual leghemoglobin gene from soybean. E M B O Journal, 2(3), 449-52.

Wiborg, O., Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K. & Marcker, K. A. (1982). The nucleotide sequences of two leghemoglobin genes from soybean. Nucleic Acids Research, 10(11), 3487-94.

Hyldig-Nielsen, J. J., Jensen, E. O., Paludan, K., Wiborg, O., Garrett, R., Jørgensen, P. & Marcker, K. A. (1982). The primary structures of two leghemoglobin genes from soybean. Nucleic Acids Research, 10(2), 689-701.

Vijn, I., Christiansen, H., Lauridsen, P., Kardailsky, I., Quandt, H. J., Broer, I., Drenth, J., Jensen, E. O., van Kammen, A. & Bisseling, T. (1995). A 200 bp region of the pea ENOD12 promoter is sufficient for nodule-specific and nod factor induced expression. Plant Molecular Biology, 28(6), 1103-10.

Vijn, I., Yang, W. C., Pallisgård, N., Jensen, E. O., van Kammen, A. & Bisseling, T. (1995). VsENOD5, VsENOD12 and VsENOD40 expression during Rhizobium-induced nodule formation on Vicia sativa roots. Plant Molecular Biology, 28(6), 1111-9.

Larsen, P. F., Nielsen, E. E., Williams, T. D., Hemmer-Hansen, J., Chipman, J. K., Kruhøffer, M., Grønkjær, P., George, S. G., Andersen, L. D. & Loeschcke, V. (2007). Adaptive differences in gene expression in European flounder (Platichthys flesus). Molecular Ecology, 16(22), 4674-83. https://doi.org/10.1111/j.1365-294X.2007.03530.x

Le Hir, H. & Andersen, G. R. (2008). Structural Insights into the exon junction complex. Current Opinion in Structural Biology, 18, 112-119.

Jensen, E. Ø., Paludan, K., Hyldig-Nielsen, JJ., Jørgensen, P. & Marcker, K. A. (1981). The Structure of a Chromosomal Leghemoglobin Gene From Soybean. Nature, 291, 677-678.

Als, A. B., Andersen, L. D., Maase, H. V. D., Koed, K., Mansilla, F., Toldbod, H., Jensen, J. L., Sengeløv, L., Jensen, K. M.-E., Ørntoft, T. F. & Ulhøi, B. P. (2007). Emmprin and Survivin predict response and survival following cisplatin-containing chemotherapy in patients with advanced bladder cancer. Clinical Cancer Research, 13(15), 4407-14.

Andersen, L. D., Zieger, K., Real, F. X., Malats, N., Carrato, A., Hurst, C., Kotwal, S., Knowles, M., Malmstrom, P.-U., de la Torre, M., Wester, K., Allory, Y., Vordos, D., Caillault, A., Radvanyi, F., Hein, A.-M. K., Jensen, J. L., Jensen, K. M.-E., Marcussen, N. & Ørntoft, T. F. (2007). Gene expression signatures predict outcome in non-muscle invasive bladder carcinoma - a multi-center validation study. Clinical Cancer Research, 13(12), 3545-51. https://doi.org/10.1158/1078-0432.CCR-06-2940

Pallesen, L. T., Pedersen, L. R. L., Petersen, T. E. & Rasmussen, J. T. (2007). Characterization of carbohydrate structures of bovine MUC15 and distribution of the mucin in bovine milk. Journal of Dairy Science, 90(7), 3143-3152.

Wæhrens, L. N., Falborg, L., Shi, J., Shi, J., Petersen, T. E., Gilbert, G. E., Dickow, J. A., Heegaard, C. W. & Rasmussen, J. T. (2008). Structure and function of lactadherin in relation to its ability to recognize cellular exposed PS. Poster session presented at 15^th Euroconference on Apoptosis, Portoroz, Slovenia.

Wæhrens, L. N., Falborg, L., Shi, J., Shi, J., Gilbert, G. E., Dickow, J. A., Heegaard, C. W. & Rasmussen, J. T. (2008). Apoptosis detection with fluorescent and radioactive lactadherin. Poster session presented at 15th Euroconference on Apoptosis, Portoroz, Slovenia.

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