Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Naveed, K., Meldgaard Madsen, L., Grombacher, D. & Larsen, J. J. (2023). Variational Mode Decomposition-Based Processing of Time-Domain Induced Polarization Data. Abstract from NSG2023 29th European Meeting of Environmental and Engineering Geophysics, Edinburgh , United Kingdom. https://doi.org/10.3997/2214-4609.202320133

Meldgaard Madsen, L., Asif, M. R., Maurya, P. K., Kühl, A. K., Domenzain, D., Jensen, C., Martin, T., Bastani, M. & Persson, L. (2023). Comparison of tTEM-IP and ERT-IP: Cases from Mine Tailing Sites in Sweden. Abstract from NSG2023 29th European Meeting of Environmental and Engineering Geophysics, Edinburgh , United Kingdom. https://doi.org/10.3997/2214-4609.202320114

Bjerring, J. C. & Busch, J. (2025). Artificial intelligence and identity: the rise of the statistical individual. AI & Society, 40(2), 311-323. Article 109533. https://doi.org/10.1007/s00146-024-01877-4

Johnson, A. S., Salinas, D. P., Siddiqui, K. M., Volckaert, K., Majchrzak, P. E., Kim, S., Choi, S., Günther, C. M., Hallman, K. A., Haglund, R. F., Valvidares, M., Ulstrup, S., Park, S. H., Kim, H. & Wall, S. (2021). Time-resolved X-ray holographic imaging of the light-induced phase transition in vanadium dioxide. Optics InfoBase Conference Papers.

Veerubhotla, R. & Marzocchi, U. (2024). Examining the resistance and resilience of anode-respiring Shewanella oneidensis biohybrid using microsensors. Chemosphere, 350, 141109. Article 141109. https://doi.org/10.1016/j.chemosphere.2024.141109

M, Z., M, B., S, B., U, C., Vg, C., Marzocchi, U., Pc, M., A, Z. & Es, B. (2023). Role of crab holobionts in benthic N cycling in mangroves with different trophic status. Mar Ecol Prog Ser, 712, 87-99. https://doi.org/10.3354/meps14327

He, S., Cai, H., Christiansen, A. V. & Asif, M. R. (2023). A Novel Normalization Method of Transient Electromagnetic Data for Efficient Neural Network Training. Paper presented at NSG2023 29th European Meeting of Environmental and Engineering Geophysics, Edinburgh , United Kingdom. https://doi.org/10.3997/2214-4609.202320125

Asif, M. R., Kass, A., Westerhoff, R., Rawlinson, Z., Christiansen, A. V. & Bording, T. S. (2023). Automated Processing of a Large-Scale Airborne Electromagnetic Survey by Deep Learning. Paper presented at NSG2023 29th European Meeting of Environmental and Engineering Geophysics, Edinburgh , United Kingdom. https://doi.org/10.3997/2214-4609.202320057

Asif, M. R., Kass, A., Westerhoff, R., Rawlinson, Z. & Christiansen, A. V. (2023). Automated data processing of a large-scale airborne time-domain electromagnetic survey by a deep learning expert system. Paper presented at 8th International Workshop on Airborne Electromagnetics, Queensland, Australia.

Istenic, D. & Arias, C. A. (2023). Sistemas evaporativos con sauces. In Soluciones basadas en la naturaleza para el tratamiento de aguas residuales (pp. 46-49). IWA Publishing.

Majumder, A., Otter, P., Röher, D., Bhatnagar, A., Khalil, N., Gupta, A. K., Bresciani, R. & Arias, C. A. (2024). Combination of advanced biological systems and photocatalysis for the treatment of real hospital wastewater spiked with carbamazepine: A pilot-scale study. Journal of Environmental Management, 351, Article 119672. https://doi.org/10.1016/j.jenvman.2023.119672

Arias, C. A., Vera-Puerto, I. L. & Chaparro, T. R. (2023). Introducción. In Soluciones basadas en la naturaleza para el tratamiento de aguas residuales (pp. 7-9). IWA Publishing.

Pascual, A., Álvarez, J. A., de la Varga, D., Arias, C. A., Van Oirschot, D., Kilian, R. & Soto, M. (2024). Horizontal flow aerated constructed wetlands for municipal wastewater treatment: The influence of bed depth. Science of the Total Environment, 908, Article 168257. https://doi.org/10.1016/j.scitotenv.2023.168257

De La Varga, D., Soto, M., Arias, C. A., Oirschot, D. V., Kilian, R., Pascual, A. & Álvarez, J. A. (2019). Constructed wetlands for industrial wastewater treatment and removal of nutrients. In Waste Management: Concepts, Methodologies, Tools, and Applications (pp. 559-587). IGI global. https://doi.org/10.4018/978-1-7998-1210-4.ch027

Nikulina, A., MacDonald, K., Zapolska, A., Serge, M. A., Roche, D. M., Mazier, F., Davoli, M., Svenning, J. C., van Wees, D., Pearce, E. A., Fyfe, R., Roebroeks, W. & Scherjon, F. (2024). Hunter-gatherer impact on European interglacial vegetation: A modelling approach. Quaternary Science Reviews, 324, Article 108439. https://doi.org/10.1016/j.quascirev.2023.108439

Boonman, C. C. F., Serra-Diaz, J. M., Hoeks, S., Guo, W. Y., Enquist, B. J., Maitner, B., Malhi, Y., Merow, C., Buitenwerf, R. & Svenning, J. C. (2024). More than 17,000 tree species are at risk from rapid global change. Nature Communications, 15, Article 166. https://doi.org/10.1038/s41467-023-44321-9

Jensen, J. S. (2023, May 8). The use of riparian hybrid constructed wetlands for river water treatment and assessment of biofilm nutrient response.

Feng, R., Mosegaard, K., Grana, D., Mukerji, T. & Hansen, T. M. (2024). Stochastic Facies Inversion with Prior Sampling by Conditional Generative Adversarial Networks Based on Training Image. Mathematical Geosciences, 56(4), 665-690. https://doi.org/10.1007/s11004-023-10119-0

Dahl, M. B., Vilhelmsen, T. N., Enemark, T. & Hansen, T. M. (2023). Neural network predictions of drawdown from groundwater abstraction in the Egebjerg catchment, Denmark. GEUS Bulletin, 53, Article 8357. https://doi.org/10.34194/geusb.v53.8357

Hansen, T. & Vendelbo, M. (2023). Probabilistic analysis of PET images using informed prior models and machine learning. Journal of Nuclear Medicine, 64(Supplement 1). https://jnm.snmjournals.org/content/64/supplement_1/P848

Lundby, J. M. B., Holste, S. & Pedersen, L. (2023). Brain Calcifications and Psychiatric Disorders. Abstract from 20th Annual Vienna BioCenter PhD Program Symposium, Vienna, Austria.

Lundby, J. M. B., Holste, S. & Pedersen, L. (2023). Brain Calcifications and Psychiatric Disorders. Poster session presented at 20th Annual Vienna BioCenter PhD Program Symposium, Vienna, Austria.

Sørensen, S. S., Lundby, J. M. B. & Pedersen, L. (2023). Lack of inorganic phosphate transporter associated with development of anxiety behavior in female mice. Poster session presented at 20th Annual Vienna BioCenter PhD Program Symposium, Vienna, Austria.

Jensen, A. N. & Leykin, A. (2023). Smale's 6th problem for generic masses. https://arxiv.org/abs/2301.02305

Sørensen, S. S., Lundby, J. M. B. & Pedersen, L. (2023). Lack of inorganic phosphate transporter associated with development of anxiety behavior in female mice. Abstract from 20th Annual Vienna BioCenter PhD Program Symposium, Vienna, Austria.

Erxleben, D. A., Dodd, R. J., Day, A. J., Green, D. E., DeAngelis, P. L., Poddar, S., Enghild, J. J., Huebner, J. L., Kraus, V. B., Watkins, A. R., Reesink, H. L., Rahbar, E. & Hall, A. R. (2024). Targeted Analysis of the Size Distribution of Heavy Chain-Modified Hyaluronan with Solid-State Nanopores. Analytical Chemistry, 96(4), 1606-1613. https://doi.org/10.1021/acs.analchem.3c04387

Baudoin, F., Chen, L., Huang, C.-H., Ouyang, C., Tindel, S. & Wang, J. (2024). Parabolic Anderson model in bounded domains of recurrent metric measure spaces.

Ruiz, P. A. & Baudoin, F. (2023). Dirichlet forms on metric measure spaces as Mosco limits of Korevaar-Schoen energies.

Baudoin, F. & Chen, L. (2023). Heat kernel gradient estimates for the Vicsek set.

Baudoin, F. (2022). Korevaar-Schoen-Sobolev spaces and critical exponents in metric measure spaces. https://doi.org/10.48550/arXiv.2207.12191

Baudoin, F., Gordina, M., Herzog, D., Kim, J. & Melcher, T. (2023). Functional inequalities for a family of infinite-dimensional diffusions with degenerate noise.

Jeppesen, H. S., Nielsen, I. G., Kondrup, J. C., Just, J. & Lock, N. (2022). LiquidReactionCell - a versatile setup for in situ synchrotron studies of compounds in liquid suspension and solution. CrystEngComm, 25(5), 751-760. https://doi.org/10.1039/d2ce01374f

Frank, S., Folkjær, M., Nielsen, M. L. N., Marks, M. J., Jeppesen, H. S., Ceccato, M., Billinge, S. J. L., Catalano, J. & Lock, N. (2024). Correlating the structural transformation and properties of ZIF-67 during pyrolysis, towards electrocatalytic oxygen evolution. Journal of Materials Chemistry A, 12(2), 781-794. https://doi.org/10.1039/d3ta05293a

McRae, E. K. S., Wan, C. J. K., Kristoffersen, E. L., Hansen, K., Gianni, E., Gallego, I., Curran, J. F., Attwater, J., Holliger, P. & Andersen, E. S. (2024). Cryo-EM structure and functional landscape of an RNA polymerase ribozyme. Proceedings of the National Academy of Sciences (PNAS), 121(3), e2313332121. Article e2313332121. https://doi.org/10.1073/pnas.2313332121

Frahm, J., Ólafsson, G. & Ørsted, B. (2025). The holomorphic discrete series contribution to the generalized Whittaker Plancherel formula II. Non-tube type groups. Indagationes Mathematicae, 36(1), 337-356. https://doi.org/10.1016/j.indag.2024.05.012

Harðardóttir, S., Haile, J. S., Ray, J. L., Limoges, A., Van Nieuwenhove, N., Lalande, C., Grondin, P. L., Jackson, R., Skaar, K. S., Heikkilä, M., Berge, J., Lundholm, N., Massé, G., Rysgaard, S., Seidenkrantz, M. S., De Schepper, S., Lorenzen, E. D., Lovejoy, C. & Ribeiro, S. (2024). Millennial-scale variations in Arctic sea ice are recorded in sedimentary ancient DNA of the microalga Polarella glacialis. Communications Earth & Environment, 5, Article 25. https://doi.org/10.1038/s43247-023-01179-5

Islam, R., Madsen, S. P. & Christensen, M. (2024). Exploring the magnetic properties of W-type SrFe18O27 hexaferrite: Insights from a first-principles study. Physical Review B, 109(2), Article 024414. https://doi.org/10.1103/PhysRevB.109.024414

Christensen, J., Grønkjær, P., Neuheimer, A. B. & Kristiansen, R. (2023). Electroreception by small-spotted catshark (Scyliorhinus canicula) embryos in relation to predator detection and avoidance. Marine and Freshwater Behaviour and Physiology, 56(5-6), 125-135. https://doi.org/10.1080/10236244.2023.2221372

Sahu, A., Deleuze, P. M., Magnan, H., Barbier, A., Li, Z., Bourgeois, S., Domenichini, B. & Dupont, , C. (2023). Surface Core-Level Shifts as a Toolbox to Evidence the BaTiO₃ Ferroelectric Phase Transition. Journal of Physical Chemistry C, 127(51), 24734-24741. https://doi.org/10.1021/acs.jpcc.3c07564

Laursen, S. F., Hansen, L. S., Bahrndorff, S., Kargo, M., Nielsen, H. M., Sahana, G., Sørensen, J. G. & Kristensen, T. N. (2023). Breeding Insects for Food and Feed. Poster session presented at Agri Food and Climate Circle 2023, København, Denmark.

Nielsen, H. M., Kristensen, T. N., Sahana, G., Laursen, S. F., Bahrndorff, S., Sørensen, J. G. & Hansen, L. S. (2023). Expected response to selection on larval size and development time in the housefly (Musca domestica). Abstract from
74th Annual Meeting of European Federation of Animal Science, Lyon, France.

Wang, Z., Digel, L., Yuan, Y., Lu, H., Yang, Y., Vogt, C., Richnow, H.-H. & Nielsen, L. P. (2024). Electrogenic sulfur oxidation mediated by cable bacteria and its ecological effects. Environmental Science and Ecotechnology, 20, Article 100371. https://doi.org/10.1016/j.ese.2023.100371

Goel, A., Hall-Andersen, M. N., Kaptchuk, G. & Spooner, N. (2023). Speed-Stacking: Fast Sublinear Zero-Knowledge Proofs for Disjunctions. In C. Hazay & M. Stam (Eds.), Advances in Cryptology – EUROCRYPT 2023: 42nd Annual International Conference on the Theory and Applications of Cryptographic Techniques, Lyon, France, April 23–27, 2023, Proceedings, Part II (pp. 347-378). Springer. https://doi.org/10.1007/978-3-031-30617-4_12

Hall-Andersen, M. N. & Nielsen, J. B. (2023). On Valiant's Conjecture: Impossibility of Incrementally Verifiable Computation from Random Oracles. In C. Hazay & M. Stam (Eds.), Advances in Cryptology – EUROCRYPT 2023: 42nd Annual International Conference on the Theory and Applications of Cryptographic Techniques, Lyon, France, April 23–27, 2023, Proceedings, Part II (pp. 438-469). Springer. https://doi.org/10.1007/978-3-031-30617-4_15, https://doi.org/10.1007/978-3-031-30617-415

Green, M., Hall-Andersen, M. N., Hennenfent, E., Kaptchuk, G., Perez, B. & Van Laer, G. (2023). Efficient Proofs of Software Exploitability for Real-world Processors. Proceedings on Privacy Enhancing Technologies, 2023(1), 627-640. https://doi.org/10.56553/popets-2023-0036

McCracken, K. G., Scott, G. R., Alza, L., Astie, A., Bakkeren, C., Bautista, E., Bulgarella, M., Cheek, R. G., Chua, B. A., Dawson, N. J., Diaz, A., Ivy, C. M., Frappell, P., Kopuchian, C., Lague, S. L., Maina, J. N., Munoz-Fuentes, V., Schnell, E. R., Sprenger, R. J. ... Smith, M. M. (2024). Diving at high altitude: O2 transport in the Ruddy Duck and Torrent Duck in the Andes. Occasional Papers of the Museum of Natural Science, Louisiana State University, 1(93), Article 1. https://doi.org/10.31390/opmns.093

Arias, C. A., Vera, I. L. & Chaparro, T. R. (Eds.) (2023). Soluciones basadas en la naturaleza para el tratamiento de aguas residuales. IWA Publishing. https://doi.org/10.2166/9781789063035

Talavera Cepeda, I., Pauli, A. B. & Assent, I. (2023). Søren Kierkegaard at SemEval-2023 Task 4: Label-aware text classification using Natural Language Inference. In A. Kr. Ojha, A. Seza Doğruöz, G. Da San Martino, H. Tayyar Madabushi, R. Kumar & E. Sartori (Eds.), Proceedings of the 17th International Workshop on Semantic Evaluation (SemEval-2023) (pp. 1871-1877). Association for Computational Linguistics. https://doi.org/10.18653/v1/2023.semeval-1.258

Elkhashab, M., Dilek, Y., Foss, M., Creemers, L. B. & Howard, K. A. (2024). A Modular Albumin-Oligonucleotide Biomolecular Assembly for Delivery of Antisense Therapeutics: Molecular Pharmaceutics. Molecular Pharmaceutics, 21(2), 491-500. https://doi.org/10.1021/acs.molpharmaceut.3c00561

Kevy, S. M., Wollesen, L. & Bremholm, M. (2024). In-situ X-ray diffraction study of Nb-doped Bi₂Se₃ crystal growth revealing unavoidable misfit layer compound. Journal of Solid State Chemistry, 330, Article 124477. https://doi.org/10.1016/j.jssc.2023.124477

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