Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Trifiletti, R., Nielsen, J. B., Frederiksen, T. K. & Jakobsen, T. P. (2016). On the Complexity of Additively Homomorphic UC Commitments. In E. Kushilevitz & T. Malkin (Eds.), Theory of Cryptography - 13th International Conference, TCC 2016-A, Proceedings (Vol. 9562, pp. 542-565). Springer VS. https://doi.org/10.1007/978-3-662-49096-9

Steffensen, L. B., Poulsen, C. B., Shim, J., Bek, M., Jacobsen, K., Conover, C. A., Bentzon, J. F. & Oxvig, C. (2015). Myocardial and Peripheral Ischemia Causes an Increase in Circulating Pregnancy-Associated Plasma Protein-A in Non-atherosclerotic, Non-heparinized Pigs. Journal of Cardiovascular Translational Research, 8(9), 528-535. https://doi.org/10.1007/s12265-015-9656-y

Andersson, R., Chen, Y., Core, L., Lis, J. T., Sandelin, A. & Jensen, T. H. (2015). Human Gene Promoters Are Intrinsically Bidirectional. Molecular Cell, 60(3), 346-347. https://doi.org/10.1016/j.molcel.2015.10.015

Mohammad-Beigi, H., Shojaosadati, S. A., Marvian, A. T., Pedersen, J. N., Klausen, L. H., Christiansen, G., Pedersen, J. S., Dong, M., Morshedi, D. & Otzen, D. E. (2015). Strong interactions with polyethylenimine-coated human serum albumin nanoparticles (PEI-HSA NPs) alter α-synuclein conformation and aggregation kinetics. Nanoscale, 7, 19627-19640. https://doi.org/10.1039/c5nr05663b

Lykke-Andersen, S. & Jensen, T. H. (2015). Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes. Nature Reviews. Molecular Cell Biology, 16, 665-677. https://doi.org/10.1038/nrm4063

Pedersen, J. N. (2015). LIPROTIDES: A NEW CLASS OF PROTEIN LIPID-COMPLEXES. https://www.helmholtz-berlin.de/media/media/spezial/events/sas/2015/Programme/Abstracts/Update_14_Sept/poster_book_a4_fin_140915.pdf

Olivarius, M. & Nielsen, L. H. (2016). Triassic paleogeography of the greater eastern Norwegian-Danish Basin. Marine and Petroleum Geology, 69, 168–182. https://doi.org/10.1016/j.marpetgeo.2015.10.008

Hansen, K. C. K., Fedorov, D. V., Jensen, A. S. & Zinner, N. T. (2015). Classical crystal formation of dipoles in two dimensions. Physica Scripta, 90(12), Article 125002. https://doi.org/10.1088/0031-8949/90/12/125002

Montomoli, J., Erichsen, R., Antonsen, S., Nilsson, T. & Sørensen, H. T. (2015). Impact of preoperative serum albumin on 30-day mortality following surgery for colorectal cancer: a population-based cohort study. BMJ Open Gastroenterology, 2(1), e000047. https://doi.org/10.1136/bmjgast-2015-000047

Christensen, T. K., Baxter, A., Clausen, P., Hounisen, J. P. & Fox, A. D. (2015). Gåsebestande og flyvesikkerhed i Danmark: Forvaltning i lufthavnes sikkerhedsområder . Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk rapport fra DCE - Nationalt Center for Miljø og Energi No. 66 http://dce2.au.dk/pub/TR66.pdf

Gajdacz, M., Das, K. K., Arlt, J., Sherson, J. F. & Opatrný, T. (2015). Time-limited optimal dynamics beyond the Quantum Speed Limit. Physical Review A, 92(6), Article 062106. https://doi.org/10.1103/PhysRevA.92.062106

Jacobsen, L. M. W., Rodrigues da Fonseca, R. A., Bernatchez, L. & Hansen, M. M. (2016). Comparative analysis of complete mitochondrial genomes suggests that relaxed purifying selection is driving high nonsynonymous evolutionary rate of the NADH2 gene in whitefish (Coregonus ssp.). Molecular Phylogenetics and Evolution, 95, 161-170. https://doi.org/10.1016/j.ympev.2015.11.008

Madsen, R. B., Sigaard Christensen, P., Houlberg, K., Lappa, E., Mørup, A. J., Klemmer, M., Olsen, E. M., Jensen, M. M., Becker, J., Iversen, B. B. & Glasius, M. (2015). Analysis of organic gas phase compounds formed by hydrothermal liquefaction of Dried Distillers Grains with Solubles. Bioresource Technology, 192, 826-830. https://doi.org/10.1016/j.biortech.2015.05.095

Zgadzaj, R., James, E. K., Kelly, S., Kawaharada, Y., de Jonge, N., Jensen, D. B., Madsen, L. H. & Radutoiu, S. (2015). A Legume Genetic Framework Controls Infection of Nodules by Symbiotic and Endophytic Bacteria. PLoS Genetics, 11(6), Article 1005280. https://doi.org/10.1371/journal.pgen.1005280

Zhukov, V. A., Borisov, A. Y., Kuznetsova, E. V., Madsen, L. H., Moffet, M. D., Ovchinnikova, E. S., Pinaev, A. G., Radutoiu, S., Rozov, S. M., Rychagova, T. S., Shtark, O. Y., Tsyganov, V. E., Voroshilova, V. A., Stougaard, J., Weeden, N. F. & Tikhonovich, I. A. (2008). GENOME SYNTENY OF PEA AND MODEL LEGUMES: FROM MUTATION THROUGH GENETIC MAPPING TO THE GENES. In FD. Dakora, SBM. Chimphango, AJ. Valentine, C. Elmerich & WE. Newton (Eds.), BIOLOGICAL NITROGEN FIXATION: TOWARDS POVERTY ALLEVIATION THROUGH SUSTAINABLE AGRICULTURE (pp. 223-224). Springer.

Nielsen, M. G., Peng, R., Offenberg, H. J. & Birkmose, D. (2016). Mating strategy of Oecophylla smaragdina (Hymenoptera: Formicidae) in northern Australia. Australian Journal of Entomology, 55(3), 261-267. https://doi.org/10.1111/aen.12182

Nielsen, K. H. (2015). Peer review. Weekendavisen, Ideer, 10.

Kraus, P. M., Mignolet, B., Baykusheva, D., Rupenyan, A., Horný, L., Penka, E. F., Grassi, G., Tolstikhin, O. I., Schneider, J., Jensen, F., Madsen, L. B., Bandrauk, A. D., Remacle, F. & Wörner , H. J. (2015). Measurement and laser control of attosecond charge migration in ionized iodoacetylene. Science, 350(6262), 790-795 . https://doi.org/10.1126/science.aab2160

Bokhorst, S., Pedersen, S. H., Brucker, L., Anisimov, O., Bjerke, J. W., Brown, R. D., Ehrich, D., Essery, R. L. H., Heilig, A., Ingvander, S., Johansson, C., Johansson, M., Svala Jónsdóttir, I., Inga, N., Luojus, K., Macelloni, G., Mariash, H., McLennan, D., Rosqvist, G. N. ... Callaghan, T. V. (2016). Changing Arctic snow cover: A review of recent developments and assessment of future needs for observations, modelling, and impacts. Ambio, 45(5), 516-537. https://doi.org/10.1007/s13280-016-0770-0

Westergaard-Nielsen, A., Lund, M., Pedersen, S. H., Schmidt, N. M., Klosterman, S., Abermann, J. & Ulf Hansen, B. (2017). Transitions in high-Arctic vegetation growth patterns and ecosystem productivity tracked with automated cameras from 2000 to 2013. Ambio, 46(Suppl. 1), 39-S52. https://doi.org/10.1007/s13280-016-0864-8

Pedersen, S. H., Tamstorf, M. P., Abermann, J., Westergaard-Nielsen, A., Lund, M., Skov, K., Sigsgaard, C., Mylius, M. R., Hansen, B. U., E. Liston, G. & Schmidt, N. M. (2016). Spatiotemporal characteristics of seasonal snow cover in Northeast Greenland from in situ observations. Arctic, Antarctic, and Alpine Research, 48(4), 653-671. https://doi.org/10.1657/AAAR0016-028

Jiang, Z., Zhang, S., Yang, C., Zadegan, R. M., Kjems, J., Huang, Y., Besenbacher, F. & Dong, M. (2015). Serum-induced degradation of 3D DNA box origami observed with high-speed atomic force microscopy (vol 8, pg 2170, 2015). Nano Research, 8(10), 3446-3446. https://doi.org/10.1007/s12274-015-0848-1

Xiang, F., Lu, Y., Li, C., Song, X., Liu, X., Wang, Z., Liu, J. & Dong, M. (2015). Cyclotrimerization-Induced Chiral Supramolecular Structures of 4-Ethynyltriphenylamine on Au(111) Surface. Chemistry: A European Journal, 21(37), 12978-12983. https://doi.org/10.1002/chem.201501434

Jiang, Z., Wang, M., Cheng, H., Li, J., Aslan, H., Lv, H., Yao, Y., Shao, L., Huang, Y. & Dong, M. (2015). Facile Preparation of TiO2 Nanoclusters on Graphene Templates for Photodegradation of Organic Compounds. Journal of Materials Science & Technology, 31(8), 840-844. https://doi.org/10.1016/j.jmst.2015.01.011

de Almeida Campos, R. C., Zhang, S., Majikes, J. M., Ferraz, L. C. C., LaBean, T. H., Dong, M. D. & Ferapontova, E. E. (2015). Electronically addressable nanomechanical switching of i-motif DNA origami assembled on basal plane HOPG. Chemical Communications, 51(74), 14111-14114. https://doi.org/10.1039/c5cc04678e

Wang, X., Weber, J. K., Liu, L., Dong, M., Zhou, R. & Li, J. (2015). A novel form of β-strand assembly observed in Aβ_33-42 adsorbed onto graphene. Nanoscale, 7(37), 15341-15348. https://doi.org/10.1039/c5nr00555h

Sun, M., Yang, C., Zheng, J., Wang, M., Chen, M., Le, D. Q. S., Kjems, J. & Bünger, C. (2015). Enhanced efficacy of chemotherapy for breast cancer stem cells by simultaneous suppression of multidrug resistance and antiapoptotic cellular defense. Acta Biomaterialia, 28, 171–182. https://doi.org/10.1016/j.actbio.2015.09.029

Yang, C., Ogaki, R., Hansen, L., Kjems, J. & Mian Teo, B. (2015). Theranostic carbon dots derived from garlic with efficient anti-oxidative effects towards macrophages. R S C Advances, 118, 97836-97840. https://doi.org/10.1039/C5RA16874K

Derczynski, L. & Chester, S. (2016). Generalised Brown Clustering and Roll-up Feature Generation. In 30th AAAI Conference on Artificial Intelligence, AAAI 2016: AAAI (pp. 1533-1539). AAAI Press.

Haahr-Lillevang, L. & Balling, P. (2015). Ultrashort-pulse laser excitation and damage of dielectric materials: Experiments and modeling. In Pacific Rim Laser Damage 2015: : Optical Materials for High-Power Lasers SPIE - International Society for Optical Engineering. https://doi.org/10.1117/12.2185834

Olesen, B. & Jørgensen, M. S. (2015). Germination timing in Danish Zostera marina populations: effects of seed source and sediment type. Abstract from CERF, Portland, OR, United States.

Delefosse, M., Povidisa, K., Poncet, D., Kristensen, E. & Olesen, B. (2016). Variation in size and chemical composition of seeds from the seagrass Zostera marina - ecological implications. Aquatic Botany, 131, 7-14. https://doi.org/10.1016/j.aquabot.2016.02.003

Olesen, B., Krause-Jensen, D. & Christensen, P. B. (2017). Depth-related changes in reproductive strategy of a cold-temperate Zostera marina meadow. Estuaries and Coasts, 40(2), 553-563. https://doi.org/10.1007/s12237-016-0155-4

Kløverpris, S., Mikkelsen, J. H., Pedersen, J. H., Jepsen, M. R., Laursen, L. S., Petersen, S. V. & Oxvig, C. (2015). Stanniocalcin-1 Potently Inhibits the Proteolytic Activity of the Metalloproteinase Pregnancy-associated Plasma Protein-A. Journal of Biological Chemistry, 290(36), 21915-21924. https://doi.org/10.1074/jbc.M115.650143

Bøtkjær, J. A., Jeppesen, J. V., Wissing, M. L., Kløverpris, S., Oxvig, C., Mason, J. I., Borgbo, T. & Andersen, C. Y. (2015). Pregnancy-associated plasma protein A in human ovarian follicles and its association with intrafollicular hormone levels. Fertility and Sterility, 104(5), 1294-1301. https://doi.org/10.1016/j.fertnstert.2015.07.1152

Koester, T., Jakobsen, J., Brøsted, J. E., Bach, K., Petersen, O. B., Kyng, M. & Rasch, S. M. (2015). Mental Models and Deliberate Manipulation of Data. In Proceedings of the International Symposium on Human Factors and Ergonomics in Health Care 2015 (1 ed., Vol. 4, pp. 62-69) https://doi.org/10.1177/2327857915041021

Franci, L. D. C., Svenning, J.-C., Balslev, H., Martins, F. R. & Nabe-Nielsen, J. (2016). The demography of a dominant Amazon liana species exhibits little environmental sensitivity. Journal of Tropical Ecology, 32(1), 79-82. https://doi.org/10.1017/S0266467415000553

Koltz, A., Schmidt, N. M. & Høye, T. T. (2015). Differential response to climate change among arthropods is altering the structure of arctic communities. Abstract from Entomology 2015, Minneapolis, United States.

Bak, E. N., Jensen, S. K., Nørnberg, P. & Finster, K. (2016). Methylated silicates may explain the release of chlorinated methane from Martian soil. Earth and Planetary Science Letters, 433, 226-231. https://doi.org/10.1016/j.epsl.2015.10.044

Michaels, T. C. T., Yde, P., Willis, J. C. W., Jensen, M. H., Otzen, D., Dobson, C. M., Buell, A. K. & Knowles, T. P. J. (2015). The length distribution of frangible biofilaments. Journal of Chemical Physics, 143(16), 1-15. Article 164901. https://doi.org/10.1063/1.4933230