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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Madsen, L. H., Collins, N. C., Rakwalska, M., Backes, G., Sandal, N., Krusell, L., Jensen, J., Waterman, E. H., Jahoor, A., Yaliffe, M., Pryor, A. J., Langridge, P., Schultze-Lefert, P. & Stougaard, J. (2003). Barley disease resistance gene analoges of the NBS-LRR class: identification and mapping. Mol. Gen. Genet ., 269, 150-161.
Madsen, L. S., Andersson, E. C., Jansson, L., Andersen, C. B., Engberg, J., Strominger, J. L., Svejgaard, A., Hjorth, J. P., Holmdahl, R., Wucherpfennig, K. W. & Fugger, L. H. (1999). Transgenic expression of HLA-DR2 and a human autoreactive T cell receptor confers susceptibility to induced and spontaneous multiple sclerosis-like disease in mice. Nature Genetics, 23, 343-347.
Malmendal, A., Halpain, S. & Chazin, W. J. (2003). Nascent structure in the kinase anchoring domain of microtubule-associated protein 2. Biochem. Biophys. Res. Comm., 301, 136-142.
Martensen, P. M. & Justesen, J. (2004). Small ISGs coming forward. Journal of Interferon & Cytokine Research, 24, 1-19.
Mathu, S. G., Knudsen, C. R., van Duin, J. & Kraal, B. (2003). Isolation of Qbeta polymerase complexes containing mutant species of elongation factor Tu. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci., 786, 279-286.
Mazerbourg, S., Overgaard, M. T., Oxvig, C., Christiansen, M., Conover, C. A., Laurendeau, I., Vidaud, M., Tosser-Klopp, G., Zapf, J. & Monget, P. (2001). Pregnancy-associated plasma protein-A (PAPP-A) in ovine, bovine, porcine, and equine ovarian follicles: involvement in IGF binding protein-4 proteolytic degradation and mRNA expression during follicular. Endocrinology, 142, 5243-5253.
McClatchy, D. B., Knudsen, C. R., Clark, B. F. C., Kahn, R. A., Hall, R. A. & Levey, A. I. (2002). Novel interaction between the M4 muscarinic acetylcholine receptor and elongation factor 1A2. Journal of Biological Chemistry, 277(32), 29268-29274.
Merrick, W. C., Nyborg, J., Sonenberg, N. (Ed.), Hershey, J. W. B. (Ed.) & Mathews, M. B. (Ed.) (2000). The protein biosynthesis elongation cycle. In Translational Control of Gene Expression (pp. 89-125). CSHL Press.
Minois, N., Rattan, S. & Rattan, S. (Ed.) (2003). Hormesis in aging. In Modulating Aging and Longevity (pp. 127-137). Kluwer Academic Publishers.
Mogues, T., Etzerodt, M., Hall, C., Engelich, G., Graversen, J. H. & Hartshorn, K. L. (2004). Tetranectin binds to the kringle 1-4 form of angiostatin and modifies its functional activity. J. Biomed. Biotechnol., 2004(2), 73-78.
Monget, P., Mazerbourg, S., Delpuech, T., Maurel, M. C., Maniere, S., Zapf, J., Lalmanach, G., Oxvig, C. & Overgaard, M. T. (2003). Pregnancy-associated plasma protein-A is involved in insulin-like growth factor binding protein-2 (IGFBP-2) proteolytic degradation in bovine and porcine preovulatory follicles: identification of cleavage site and. Biology of Reproduction, 68, 77-86.
Møller, E. H., Jensen, J. E., Brehm, L., Stensbøl, T. B., Johansen, T. N., Nielsen, B., Madsen, U. & Krogsgaard-Larsen, P. (1999). Stereochemistry and molecular pharmacology of the GluR1-4 and GluR5 antagonist 2-amino-3-[5- tert-butyl-3-(phosphonomethoxy)-4-isoxazolyl]propionic acid (ATPO). Chirality, 11, 752-759.
Nehlin, J. O., Skovgaard, G. L. & Bohr, V. (2000). The Werner syndrome: A model for the study of human aging. New York Academy of Sciences. Annals, 908, 167-179.
Nexø, E., Christensen, A.-L., Petersen, T. E. & Fedosov, S. N. (2000). Measurement of transcobalamin by ELISA. Clinical Chemistry, 46, 1643-1649.
Nielbo, S., Thomsen, J. K., Graversen, J. H., Jensen, P. H., Etzerodt, M., Poulsen, F. M. & Thøgersen, H. C. (2004). Structure of the plasminogen kringle 4 binding calcium-free form of the C-type lectin-like domain of tetranectin. Biochemistry, 43, 8636-8643.
Nielsen, A. L., Jørgensen, P., Lerouge, T., Cervino, M., Chambon, P. & Losson, R. (2004). Nizpl, a novel multitype zinc finger protein that interacts with NSD1 histone lysine methyltransferase through a unique C2HR motif. Molecular and Cellular Biology, 24, 5184-5196.
Nielsen, M., Liljefors, T., Krogsgaard-Larsen, P. & Jensen, J. E. (2003). The selective activation of the glutamate receptor GluR5 by ATPA is controlled by serine 741. Mol. Pharmacol., 63, 19-25.
Nielsen, R. L., Andersen, M. H., Mabhout, P., Berglund, L., Petersen, T. E. & Rasmussen, J. T. (1999). Isolation of adipophilin and butyrophilin from bovine milk and characterization of a cNDA encoding adipophilin. Journal of Dairy Science, 82, 2543-2549.
Nissen, P., Hansen, J., Ban, J., Moore, P. B. & Steitz, T. A. (2000). The structural basis for ribosome function in peptide bond synthesis. Science, 289, 920-930.
Nissen, P. & Nyborg, J. (2004). Ternary complex of elongation factor Tu. In Special Series: Classical Structures (pp. 12259-12254) http://www.ergito.com
Nissen, P., Nyborg, J., Clark, B. F. C., Lapointe, J. (Ed.) & Barkier-Gingras, L. (Ed.) (2003). Translational Elongation. In Translational Mechanisms Landes Bioscience.
Nordhoff, E., Korgsdam, A.-M., Jørgensen, H. F., Kallipolitis, B. H., Clark, B. F. C., Roepstorff, P. & Kristiansen, K. (1999). Rapid identification of DNA-binding proteins by mass spectrometry. Nature Biotech., 17, 884-888.
Novero, M., Faccio, A., Genre, A., Stougaard, J., Webb, J. K., Parniske, M. & Bonfante, P. (2002). The mycorrhizal phenotype of the mutant Lotus japonicus Ljsym4-1: A comparative morphological analysis. New Phytologist, 154, 741-749.
Nozik-Grayck, E., Dieterle, C. S., Piantadosi, C. A., Enghild, J. J. & Oury, T. D. (2000). Secretion of extracellular superoxide dismutase in neonatal lungs. American Journal of Physiology: Lung Cellular and Molecular Physiology, 279, 977-984.
Nørskov-Lauritsen, N., Sandvang, D., Hedegaard, J., Fussing, V., Mortensen, K. K., Sperling-Petersen, H. U. & Schønheyder, H. C. (2001). Clonal origin of gentamycin-resistant Citrobacter freundii in a Danish county. J. Med. Microbiol., 50, 636-641.
Odgaard, L., Bak, M., Jakobsen, H. J. & Nielsen, N. C. (2001). 13C chemical shift and 13C-14N dipolar coupling tensors determined by 13C rotary resonance NMR. Journal of Magnetic Resonance, 148, 298-308.
Ohtsuki, T., Watanabe, Y. Y., Takemoto, C., Kawai, G., Ueda, T., Kita, K., Kojima, S., Kaziro, Y., Nyborg, J. & Watanabe, K. (2001). An 'elongated' elongation factor Tu for truncated tRNAs in Nematode mitochondria. Journal of Biological Chemistry, 276, 21571-21577.
Okkels, H., Rasmussen, T. E., Sanghera, D. K., Kamboh, M. I. & Kristensen, T. (1999). Structure of the human beta2-glycoprotein I (apolipoprotein H) gene. FEBS journal, 259, 435-440.
Olesen, C., Sørensen, T. L., Nielsen, R. C., Møller, J. V. & Nissen, P. (2004). Protein Data Bank deposition: Accession number 1XP5.

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Nygaard, B., Juel, A. & Fredshavn, J. R. (2016). Ændringer i det § 3-beskyttede naturareal 1995-2014. Resultater fra Naturstyrelsens opdateringsprojekt. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk rapport fra DCE - Nationalt Center for Miljø og Energi No. 79
Oirschot, D. V., de la Varga, D., Kilian, R., Soto, M., Alvarez, J. A. & Arias, C. A. (2016). Aerated wetlands, oxygen demand and performance in the HIGHWET FP7 Project. In G. Magdalena, M.-L. Karolina & W. Ewa (Eds.), Proceedings of the 15th IWA International Conference on Wetland systems for Water Pollution Control (Vol. vol 2, pp. 754-756). Gdansk University.
Dickinson, J., Akcay, C., Ferree, E. & Stern, C. (2016). A hierarchical analysis of incest avoidance in a cooperative breeder. Behavioral Ecology, 27(4), 1132-1140. https://doi.org/10.1093/beheco/arw020
Hardisty, D. S., Riedinger, N., Planavsky, N. J., Asael, D., Andren, T., Jorgensen, B. B. & Lyons, T. W. (2016). A Holocene history of dynamic water column redox conditions in the Landsort Deep, Baltic Sea. American Journal of Science, 316(8), 713-745. https://doi.org/10.2475/08.2016.01
Kirchheimer, B., Schinkel, C. C. F., Dellinger, A. S., Klatt, S., Moser, D., Winkler, M., Lenoir, J., Caccianiga, M., Guisan, A., Nieto-Lugilde, D., Svenning, J. C., Thuiller, W., Vittoz, P., Willner, W., Zimmermann, N. E., Hörandl, E. & Dullinger, S. (2016). A matter of scale: Apparent niche differentiation of diploid and tetraploid plants may depend on extent and grain of analysis. Journal of Biogeography, 43(4), 716-726. https://doi.org/10.1111/jbi.12663
Bristow, L. A., Dalsgaard, T., Tiano, L., Mills, D. B., Bertagnolli, A. D., Wright, J., Hallam, S. J., Ulloa, O., Canfield, D. E., Revsbech, N. P. & Thamdrup, B. (2016). Ammonium and nitrite oxidation at nanomolar oxygen concentrations in oxygen minimum zone waters. Proceedings of the National Academy of Sciences (PNAS), 113(38), 10601-10606. https://doi.org/10.1073/pnas.1600359113
Jiménez-Arias, J. L., Mata, M. P., Corzo, A., Poulton, S. W., März, C., Sánchez-Bellón, A., Martínez-López, J., Casas-Ruiz, M., García-Robledo, E., Bohórquez, J. & Papaspyrou, S. (2016). A multiproxy study distinguishes environmental change from diagenetic alteration in the recent sedimentary record of the inner Cadiz Bay (SW Spain). The Holocene, 26(9), 1355-1370. https://doi.org/10.1177/0959683616640046
Stief, P., Kamp, A., Thamdrup, B. & Glud, R. N. (2016). Anaerobic nitrogen turnover by sinking diatom aggregates at varying ambient oxygen levels. Frontiers in Microbiology, 7(FEB), Article 98. https://doi.org/10.3389/fmicb.2016.00098
Morueta-Holme, N., Blonder, B., Sandel, B. S., McGill, B. J., Peet, R. K., Ott, J. E., Violle, C., Enquist, B. J., Jorgensen, P. M. & Svenning, J.-C. (2016). A network approach for inferring species associations from co-occurrence data. Ecography, 39(12), 1139-1150. https://doi.org/10.1111/ecog.01892
Engemann, K., Sandel, B. S., Boyle, B., Enquist, B. J., Jørgensen, P. M., Kattge, J., McGill, B. J., Morueta-Holme, N., Peet, R. K., Spencer, N. J., Violle, C., Wiser, S. K. & Svenning, J.-C. (2016). A plant growth form dataset for the New World. Ecology, 97(11), 3243-3243. https://doi.org/10.1002/ecy.1569
Dawson, M. N., Axmacher, J. C., Beierkuhnlein, C., Blois, J., Bradley, B. A., Cord, A. F., Dengler, J., He, K. S., Heaney, L. R., Jansson, R., Mahecha, M. D., Myers, C., Nogués-Bravo, D., Papadopoulou, A., Reu, B., Rodríguez-Sánchez, F., Steinbauer, M. J., Stigall, A., Tuanmu, M. N. & Gavin, D. G. (2016). A second horizon scan of biogeography: Golden ages, Midas touches, and the Red Queen. Frontiers of Biogeography, 8(4), Article e29770. https://doi.org/10.21425/F58429770
Yee, M. O., Maegaard, K., Revsbech, N. P., Thamdrup, B., Ottosen, L. D. M. & Rotaru, A.-E. (2016). A Step Towards Understanding Electromethanogenesis. Poster session presented at The 3rd European Meeting of the International Society for Microbial Electrochemistry and Technology, Rom, Italy. http://rotarulab.com/wp-content/uploads/2016/10/EU-ISMET-2016_MOY_1-e1475674716953.jpg
Charbonnier, Y. M., Barbaro, L., Barnagaud, J.-Y., Ampoorter, E., Nezan, J., Verheyen, K. & Jactel, H. (2016). Bat and bird diversity along independent gradients of latitude and tree composition in European forests. Oecologia, 182(2), 529-537. https://doi.org/10.1007/s00442-016-3671-9
Alstrup, A. K. O., Wang, T., Andersen, J. B. & Bertelsen, M. (2016). Bedøvelse af fugle. Dyrlægen, 1, 40-42.
Zurell, D., Thuiller, W., Pagel, J., Cabral, J. S., Munkemuller, T., Gravel, D., Dullinger, S., Normand, S., Schiffers, K. H., Moore, K. A. & Zimmermann, N. E. (2016). Benchmarking novel approaches for modelling speciesrange dynamics. Global Change Biology, 22(8), 2651-2664. https://doi.org/10.1111/gcb.13251
Pawlowski, J., Esling, P., Lejzerowicz, F., Cordier, T., Visco, J. A., Martins, C. I. M., Kvalvik, A., Staven, K. & Cedhagen, T. (2016). Benthic monitoring of salmon farms in Norway using foraminiferal metabarcoding. Aquaculture Environment Interactions, 8, 371-386. https://doi.org/10.3354/AEI00182
Riis, T., Graeber, D., Levi, P. S., Rasmussen, J., Mia Jensen, T., Rosenhøj-Leth, S., Machado, É. M. N. & Baattrup-Pedersen, A. (2016). Benthic primary production and nutrient retention under multiple stressors in agricultural streams. Abstract from Society for Freshwater Science Annual Meeting, Sacramento, United States.
Welinder, K. G., Hansen, R., Overgaard, M. T., Brohus, M., Sonderkaer, M., von Bergen, M., Rolle-Kampczyk, U., Otto, W., Lindahl, T. L., Arinell, K., Evans, A. L., Swenson, J. E., Revsbech, I. G. & Frobert, O. (2016). Biochemical Foundations of Health and Energy Conservation in Hibernating Free-ranging Subadult Brown Bear Ursus arctos. Journal of Biological Chemistry, 291(43), 22509-22523. https://doi.org/10.1074/jbc.M116.742916
Bester, K., Bollmann, U. E., Casas, M. E., Brandt, K. K., Lyu, T., Carvalho, P. & Brix, H. (2016). Biodegradation of biocides in soils, soil filters and other biofilm reactors. Poster session presented at SETAC Europe 2016, Nantes, France.
Naeem, S., Prager, C., Weeks, B., Varga, A., Flynn, D. F. B., Griffin, K., Muscarella, R., Palmer, M., Wood, S. & Schuster, W. (2016). Biodiversity as a multidimensional construct: A review, framework and case study of herbivory’s impact on plant biodiversity. Proceedings of the Royal Society B: Biological Sciences, 283(1844), Article 20153005. https://doi.org/10.1098/rspb.2015.3005
Steinbauer, M., Field, R., Fernández-Palacios, J. M., Irl, S. D. H., Otto, R., Schaefer, H. & Beierkuhnlein, C. (2016). Biogeographic ranges do not support niche theory in radiating Canary Island plant clades. Global Ecology and Biogeography, 25(7), 792-804. https://doi.org/10.1111/geb.12425
Poorter, L., Ongers, F. B., Aide, T. M., Zambrano, A. M. A., Balvanera, P., Becknell, J. M., Boukili, V., Brancalion, P. H. S., Broadbent, E. N., Chazdon, R. L., Craven, D., de Almeida-Cortez, J. S., Cabral, G. A. L., de Jong, B. H. J., Denslow, J. S., Dent, D. H., DeWalt, S. J., Dupuy, J. M., Duran, S. M. ... Rozendaal, D. M. A. (2016). Biomass resilience of Neotropical secondary forests. Nature, 530(7589), 211-214. https://doi.org/10.1038/nature16512
Pornpongrungrueng, P., Gustafsson, M. H. G., Borchsenius, F., Koyama, H. & Chantaranothai, P. (2016). Blumea (Compositae: Inuleae) in continental Southeast Asia. Kew Bulletin, 71(1), 1-46. Article 1. https://doi.org/10.1007/S12225-016-9612-2
Jensen, B., Storz, J. F. & Fago, A. (2016). Bohr effect and temperature sensitivity of hemoglobins from highland and lowland deer mice. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 195, 10-14. https://doi.org/10.1016/j.cbpa.2016.01.018
Ripple, W. J., Abernethy, K., Betts, M. G., Chapron, G., Dirzo, R., Galetti, M., Levi, T., Lindsey, P. A., Macdonald, D. W., Machovina, B., Newsome, T. M., Peres, C. A., Wallach, A. D. & Wolf, C. (2016). Bushmeat hunting and extinction risk to the world’s mammals. Royal Society Open Science, 3(10). https://doi.org/10.1098/rsos.160498