Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Fago, A. (2022). New insights into survival strategies to oxygen deprivation in anoxia-tolerant vertebrates. Acta Physiologica (Print), 235(3), e13841. Article e13841. https://doi.org/10.1111/apha.13841

Jacobs, K., Devriese, D. & Timany, A. (2022). Purity of an ST monad: Full abstraction by semantically typed back-translation. Proceedings of the ACM on Programming Languages , 6(OOPSLA1), Article 82. https://doi.org/10.1145/3527326

Georges, A. L., Trieu, A. & Birkedal, L. (2022). Le temps des cerises: Efficient temporal stack safety on capability machines using directed capabilities. Proceedings of the ACM on Programming Languages , 6(OOPSLA1), Article 74. https://doi.org/10.1145/3527318

Türkmen, R., Pfeuffer, K., Barrera MacHuca, M. D., Batmaz, A. U. & Gellersen, H. (2022). Exploring Discrete Drawing Guides to Assist Users in Accurate Mid-air Sketching in VR. In CHI 2022 - Extended Abstracts of the 2022 CHI Conference on Human Factors in Computing Systems Article 276 Association for Computing Machinery. https://doi.org/10.1145/3491101.3519737

Gordon, J. B., Sanei, H. & Pedersen, P. K. (2022). Predicting hydrogen and oxygen indices (HI, OI) from conventional well logs using a Random Forest machine learning algorithm. International Journal of Coal Geology, 249, Article 103903. https://doi.org/10.1016/j.coal.2021.103903

Nouwens, M., Bagge, R., Kristensen, J. B. & Klokmose, C. N. (2022). Consent-O-Matic: Automatically Answering Consent Pop-ups Using Adversarial Interoperability. In CHI 2022 - Extended Abstracts of the 2022 CHI Conference on Human Factors in Computing Systems Article 238 Association for Computing Machinery. https://doi.org/10.1145/3491101.3519683

Bühlmeyer, H., Adamsen, K. C., Xu, T., Lammich, L., Libuda, J., Lauritsen, J. V. & Wendt, S. (2022). Adsorption and Reaction of NH₃on Rutile TiO₂(110): An STM Study. Journal of Physical Chemistry C, 126(15), 6590-6600. https://doi.org/10.1021/acs.jpcc.2c01414

Fantasia, A., Mattioli, E., Spangenberg, J. E., Adatte, T., Bernárdez, E., Ferreira, J., Thibault, N., Krencker, F. N. & Bodin, S. (2022). The middle-late Aalenian event: A precursor of the Mesozoic Marine Revolution. Global and Planetary Change, 208, Article 103705. https://doi.org/10.1016/j.gloplacha.2021.103705

Ommen, P., Hansen, L., Hansen, B. K., Vu-Quang, H., Kjems, J. & Meyer, R. L. (2022). Aptamer-Targeted Drug Delivery for Staphylococcus aureus Biofilm. Frontiers in cellular and infection microbiology, 12, Article 814340. https://doi.org/10.3389/fcimb.2022.814340

Hancke, K., Kristiansen, S. & Lund-Hansen, L. C. (2022). Highly Productive Ice Algal Mats in Arctic Melt Ponds: Primary Production and Carbon Turnover. Frontiers in Marine Science, 9, Article 841720. https://doi.org/10.3389/fmars.2022.841720

Caragiannis, I., Kanellopoulos, P. & Voudouris, A. A. (2022). Bounding the Inefficiency of Compromise in Opinion Formation. Algorithmica, 84(1), 234-271. https://doi.org/10.1007/s00453-021-00892-x

Sert, M. F., Niemann, H., Reeves, E. P., Granskog, M. A., Hand, K. P., Kekäläinen, T., Jänis, J., Rossel, P. E., Ferré, B., Silyakova, A. & Gründger, F. (2022). Compositions of dissolved organic matter in the ice-covered waters above the Aurora hydrothermal vent system, Gakkel Ridge, Arctic Ocean. Biogeosciences, 19(8), 2101-2120. https://doi.org/10.5194/bg-19-2101-2022

De Jaeger, T., Shappee, B. J., Kochanek, C. S., Stanek, K. Z., Beacom, J. F., Holoien, T. W. S., Thompson, T. A., Franckowiak, A. & Holmbo, S. (2022). ASAS-SN search for optical counterparts of gravitational-wave events from the third observing run of Advanced LIGO/Virgo. Monthly Notices of the Royal Astronomical Society, 509(3), 3427-3440. https://doi.org/10.1093/mnras/stab3141

Torres, L. G., Bird, C. N., Rodríguez-González, F., Christiansen, F., Bejder, L., Lemos, L., Urban R, J., Swartz, S., Willoughby, A., Hewitt, J. & Bierlich, K. C. (2022). Range-Wide Comparison of Gray Whale Body Condition Reveals Contrasting Sub-Population Health Characteristics and Vulnerability to Environmental Change. Frontiers in Marine Science, 9, Article 867258. https://doi.org/10.3389/fmars.2022.867258

Wang, E. X., Nordlander, T., Asplund, M., Lind, K., Zhou, Y. & Reggiani, H. (2022). Non-detection of ⁶Li in Spite plateau stars with ESPRESSO. Monthly Notices of the Royal Astronomical Society, 509(1), 1521-1535. https://doi.org/10.1093/mnras/stab2924

Winkler, M. B. L., Nel, L., Frain, K. M., Dedic, E., Olesen, E. & Pedersen, B. P. (2022). Sterol uptake by the NPC system in eukaryotes: a Saccharomyces cerevisiae perspective. FEBS Letters, 596(2), 160-179. https://doi.org/10.1002/1873-3468.14253

Chen, X., Ge, Z., Chen, Y., Bi, S., Yu, J., Yang, W., Ferguson, J. W., Wu, Y. & Li, Y. (2022). Ages of Main-sequence Turnoff Stars from the GALAH Survey. Astrophysical Journal, 929(2), Article 124. https://doi.org/10.3847/1538-4357/ac55a1

Gomes-Duarte, A., Venø, M. T., de Wit, M., Senthilkumar, K., Broekhoven, M. H., van den Herik, J., Heeres, F. R., van Rossum, D., Rybiczka-Tesulov, M., Legnini, I., van Rijen, P. C., van Eijsden, P., Gosselaar, P. H., Rajewsky, N., Kjems, J., Vangoor, V. R. & Pasterkamp, R. J. (2022). Expression of Circ_Satb1 Is Decreased in Mesial Temporal Lobe Epilepsy and Regulates Dendritic Spine Morphology. Frontiers in Molecular Neuroscience, 15, Article 832133. https://doi.org/10.3389/fnmol.2022.832133

Nie, S. & Skibsted, J. (2022). Characterization of Monochromate and Hemichromate AFm Phases and Chromate-Containing Ettringite by¹H,²⁷Al, and⁵³Cr MAS NMR Spectroscopy. Minerals, 12(3), Article 371. https://doi.org/10.3390/min12030371

Lundgren, E. J., Moeller, K. T., Clyne, M. O., Middleton, O. S., Mahoney, S. M. & Kwapich, C. L. (2022). Cicada nymphs dominate American black bear diet in a desert riparian area. Ecology and Evolution, 12(3), Article e8577. https://doi.org/10.1002/ece3.8577

Christensen, E. R., Garrido, E. & Jensen, A. S. (2022). Two-body continuum states in noninteger geometry. Physical Review A, 105(3), Article 033308. https://doi.org/10.1103/PhysRevA.105.033308

Joseph, S., Skibsted, J. & Cizer, Ö. (2022). Effect of Water–Solid Mixing Sequence and Crystallization Water of Calcium Sulphate on the Hydration of C₃ A. Materials, 15(6), Article 2297. https://doi.org/10.3390/ma15062297

Dieudonné, T., Herrera, S. A., Laursen, M. J., Lejeune, M., Stock, C., Slimani, K., Jaxel, C., Lyons, J. A., Montigny, C., Pomorski, T. G., Nissen, P. & Lenoir, G. (2022). Autoinhibition and regulation by phosphoinositides of ATP8B1, a human lipid flippase associated with intrahepatic cholestatic disorders. eLife, 11, Article e75272. https://doi.org/10.7554/eLife.75272

Liu, A. C. Y., Bøjesen, E. D., Tabor, R. F., Mudie, S. T., Zaccone, A., Harrowell, P. & Petersen, T. C. (2022). Local symmetry predictors of mechanical stability in glasses. Science Advances, 8(11), Article abn0681. https://doi.org/10.1126/sciadv.abn0681

Olesen, H. G., Michailidou, I., Zelek, W. M., Vreijling, J., Ruizendaal, P., de Klein, F., Marquart, J. A., Kuipers, T. B., Mei, H., Zhang, Y., Ahasan, M., Johnson, K. K., Wang, Y., Morgan, B. P., van Dijk, M., Fluiter, K., Andersen, G. R. & Baas, F. (2023). Development, Characterization, and in vivo Validation of a Humanized C6 Monoclonal Antibody that Inhibits the Membrane Attack Complex. Journal of Innate Immunity, 15(1), 16-36. https://doi.org/10.1159/000524587

Bahnsen, E., Rasmussen, S. E., Loft, N. J. S. & Zinner, N. T. (2022). Application of the Diamond Gate in Quantum Fourier Transformations and Quantum Machine Learning. Physical Review Applied, 17(2), Article 024053. https://doi.org/10.1103/PhysRevApplied.17.024053

Manna, S., Duncan, C. W., Weidner, C. A., Sherson, J. F. & Nielsen, A. E. B. (2022). Anyon braiding on a fractal lattice with a local Hamiltonian. Physical Review A, 105(2), Article L021302. https://doi.org/10.1103/PhysRevA.105.L021302

Inceoglu, F., Howe, R. & Loto'Aniu, P. T. M. (2022). Causal Interaction between the Subsurface Rotation Rate Residuals and Radial Magnetic Field in Different Timescales. Astrophysical Journal, 925(2), Article 170. https://doi.org/10.3847/1538-4357/ac4096

Rouvière, J. O., Lykke-Andersen, S. & Jensen, T. H. (2022). Control of non-productive RNA polymerase II transcription via its early termination in metazoans. Biochemical Society Transactions, 50(1), 283-295. https://doi.org/10.1042/BST20201140

Selnihhin, D., Mortensen, K. I., Larsen, J. B., Simonsen, J. B. & Pedersen, F. S. (2022). DNA Origami Calibrators for Counting Fluorophores on Single Particles by Flow Cytometry. Small Methods, 6(3), Article 2101364. https://doi.org/10.1002/smtd.202101364

Gent, M. R., Bergemann, M., Serenelli, A., Casagrande, L., Gerber, J. M., Heiter, U., Kovalev, M., Morel, T., Nardetto, N., Adibekyan, V., Aguirre, V. S., Asplund, M., Belkacem, K., Del Burgo, C., Bigot, L., Chiavassa, A., Rodríguez Díaz, L. F., Goupil, M. J., Hernández, J. I. G. ... Tsantaki, M. (2022). The SAPP pipeline for the determination of stellar abundances and atmospheric parameters of stars in the core program of the PLATO mission. Astronomy and Astrophysics, 658, Article A147. https://doi.org/10.1051/0004-6361/202140863

Laich, A., Patel, H., Zarantonello, A., Sim, R. B. & Inal, J. M. (2022). C2 by-pass: Cross-talk between the complement classical and alternative pathways. Immunobiology, 227(3), Article 152225. https://doi.org/10.1016/j.imbio.2022.152225

Dalgaard, M. & Motzoi, F. (2022). Fast, high precision dynamics in quantum optimal control theory. Journal of Physics B: Atomic, Molecular and Optical Physics, 55(8), Article 085501. https://doi.org/10.1088/1361-6455/ac6366

Mamakhel, M. A. H., H. Gjørup, F., Kløve, M., Borup, K. & Iversen, B. B. (2022). Synthesis of Phase-Pure Thermochromic VO₂ (M1). Inorganic Chemistry, 61(23), 8760–8766. https://doi.org/10.1021/acs.inorgchem.2c00701

Viel, N., Mielec, C., Pétillon, J. & Høye, T. T. (2022). Variation in abundance and life-history traits of two congeneric Arctic wolf spider species, Pardosa hyperborea and Pardosa furcifera, along local environmental gradients. Polar Biology, 45(5), 937-950. https://doi.org/10.1007/s00300-022-03041-4

Apablaza, H., Solís, M., Conejera, D., Fonseca, A., Cid, J., Tarifeño-Saldivia, E., Valenzuela, S., Emhart, V. & Fernández, M. (2022). bHLH Transcription Factors Undergo Alternative Splicing During Cold Acclimation in a Eucalyptus hybrid. Plant Molecular Biology Reporter, 40(2), 310-326. https://doi.org/10.1007/s11105-021-01313-7

Larsen, N. Y., Sun, F., Rajkowska, G., Jensen, E. B. V. & Nyengaard, J. R. (2019). Characterisation of minicoloumnarity and volume tensors of neurons in Brodmann Area 46 in normal, schizophrenic and depressive human autopsy brains. Poster session presented at 15th International Congress for Stereology and Image Analysis.

Rattigan, E., Sun, Z., Gallo, T., Nino, M. A., Parreiras, S. D. O., Martín-Fuentes, C., Martin-Romano, J. C., Écija, D., Escudero, C., Villar, I., Rodríguez-Fernández, J. & Lauritsen, J. V. (2022). The cobalt oxidation state in preferential CO oxidation on CoO_x/Pt(111) investigated by operando X-ray photoemission spectroscopy. Physical Chemistry Chemical Physics, 24(16), 9236-9246. https://doi.org/10.1039/d2cp00399f

Jensen, S. V. B. & Madsen, L. B. (2022). Propagation time and nondipole contributions to intraband high-order harmonic generation. Physical Review A, 105(2), Article L021101. https://doi.org/10.1103/PhysRevA.105.L021101

Dakin, J., Hannestad, S. & Tram, T. (2022). The cosmological simulation code CONCEPT 1.0. Monthly Notices of the Royal Astronomical Society, 513(1), 991-1014. https://doi.org/10.1093/mnras/stac568

Thomsen, E. M., Sonne, A., Bertelsen, M., Vermeulen, E., Ganswindt, A., Wang, T. & Ochala, J. (2022). Fine-regulation of myosin relaxed states in vertebrate muscle. The FASEB Journal, 36(S1). https://doi.org/10.1096/fasebj.2022.36.S1.R4611

Vickaryous, M., Williams, C., Willan, G., Kirby, A., Herrel, A., Kever, L., Moazen, M., Marghoub, A., Rai, S., Abzhanov, A. & Evans, S. (2022). Histological Diversity And Evolution Of Lizard Osteoderms. The FASEB Journal, 36(S1). https://doi.org/10.1096/fasebj.2022.36.S1.R3199

Gómez-Cuadrado, L., Bullock, E., Mabruk, Z., Zhao, H., Souleimanova, M., Noer, P. R., Turnbull, A. K., Oxvig, C., Bertos, N., Byron, A., Dixon, J. M., Park, M., Haider, S., Natrajan, R., Sims, A. H. & Brunton, V. G. (2022). Characterisation of the Stromal Microenvironment in Lobular Breast Cancer. Cancers, 14(4), Article 904. https://doi.org/10.3390/cancers14040904

Buder, S., Lind, K., Ness, M. K., Feuillet, D. K., Horta, D., Monty, S., Buck, T., Nordlander, T., Bland-Hawthorn, J., Casey, A. R., De Silva, G. M., D'Orazi, V., Freeman, K. C., Hayden, M. R., Kos, J., Martell, S. L., Lewis, G. F., Lin, J., Schlesinger, K. J. ... GALAH Collaboration (2022). The GALAH Survey: Chemical tagging and chrono-chemodynamics of accreted halo stars with GALAH+ DR3 and Gaia eDR3. Monthly Notices of the Royal Astronomical Society, 510(2), 2407-2436. https://doi.org/10.1093/mnras/stab3504