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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Bhatia, H., Kashavarz, M., Martin, C., Gaal, L. V., Zhang, Y., de Coen, B., Schrenker, N. J., Valli, D., Ottesen, M., Bremholm, M., Van de Vondel, J., Bals, S., Hofkens, J. & Debroye, E. (2023). Achieving High Moisture Tolerance in Pseudohalide Perovskite Nanocrystals for Light-Emitting Diode Application. ACS Applied Optical Materials, 1(6), 1184-1191. https://doi.org/10.1021/acsaom.3c00096
Vela, I. (2022). Remediation monitoring guided by 3D time-lapse inversion of dense DC borehole data. Abstract from NSG2022 4th Conference on Geophysics for Mineral Exploration and Mining, Serbia.
Schnetler, K. I., Madsen, H., Śliwińska, K. K., Heilmann-Clausen, C. & Ulleberg, K. (2024). A late Oligocene molluscan fauna and Oligocene coastal outcrops from Vilsund, NW Denmark. Bulletin of the Geological Society of Denmark, 73, 1-40. https://doi.org/10.37570/bgsd-2024-73-01
Borg, K. N., Cheng, G., Shetty, A., Wang, T., Tesauro, C., Knudsen, B. R. & Ho, Y.-P. (2023). An Integrated Platform for the Assessment of Fluorescent Signals in Hydrogel Beads Produced by Droplet Microfluidics. In Proceedings 2023 IEEE 23rd International Conference on Nanotechnology (NANO) (pp. 180-184). IEEE. https://doi.org/10.1109/NANO58406.2023.10231287
Gleirscher, M., van de Pol, J. & Woodcock, J. (2023). A manifesto for applicable formal methods. Software and Systems Modeling, 22(6), 1737-1749. https://doi.org/10.1007/s10270-023-01124-2
Rysgaard, S. (2023). Microbial life in Arctic sea ice. Abstract from Tara Polar Drift, Paris, France.
Rysgaard, S. (2023). Bridging the Fram Strait: GIOS & SIOS collaboration. Abstract from Svalbard science conference, Oslo, Norway.
Rysgaard, S. (2023). Water masses along west Greenland and their implication for glacier melt. Abstract from Arctic International Technical Conference, Nuuk, Ecuador.
Lorentzen, E. & Lechtreck, K. (2023). Intraflagellar transport. In The Chlamydomonas Sourcebook : Volume 3 : Cell Motility and Behavior (Vol. 3, pp. 307-336). Academic Press. https://doi.org/10.1016/C2019-0-02817-8
Aranha, D. F., Costache, A., Guimaraes, A. & Soria-Vazquez, E. (2024). A Practical Framework for Verifiable Computation over Encrypted Data. Abstract from 3rd Annual FHE.org Conference on Fully Homomorphic Encryption, Toronto, Canada. https://eprint.iacr.org/2023/1949
García-Soto, I., Andersen, S. U., Monroy-Morales, E., Robledo-Gamboa, M., Guadarrama, J., Aviles-Baltazar, N. Y., Serrano, M., Stougaard, J. & Montiel, J. (2024). A collection of novel Lotus japonicus LORE1 mutants perturbed in the nodulation program induced by the Agrobacterium pusense strain IRBG74. Frontiers in Plant Science, 14, Article 1326766. https://doi.org/10.3389/fpls.2023.1326766
Jurkovičová, L., Ben Ltaief, L., Hult Roos, A., Hort, O., Finke, O., Albrecht, M., Hoque, Z., Klimešová, E., Sundaralingam, A., Antipenkov, R., Grenfell, A., Špaček, A., Szuba, W., Krikunova, M., Mudrich, M., Nejdl, J. & Andreasson, J. (2024). Bright continuously tunable vacuum ultraviolet source for ultrafast spectroscopy. Communications Physics, 7, Article 26. https://doi.org/10.1038/s42005-023-01513-5
Singh, S. P., Rudra, A., Singh, Y. R., Dutta, S., Devi, N. R., Devi, A. B. & Trivedi, G. K. (2023). Source and depositional conditions of early Palaeogene coal-bearing sediments, Meghalaya, Eastern India. Journal of Earth System Science, 132(4), Article 184. https://doi.org/10.1007/s12040-023-02198-8
Yamasaki, S., Sasaki, Y., Karras, P. & Onizuka, M. (2023). Holistic Prediction on a Time-Evolving Attributed Graph. Proceedings of the Annual Meeting of the Association for Computational Linguistics, 61(1), 13676-13694. https://doi.org/10.18653/v1/2023.acl-long.765
Zardbani, F., Mamoulis, N., Idreos, S. & Karras, P. (2023). Adaptive Indexing of Objects with Spatial Extent. Proceedings of the VLDB Endowment, 16(9), 2248-2260. https://doi.org/10.14778/3598581.3598596
Wu, S., Hou U, L. & Karras, P. (2023). k-Best Egalitarian Stable Marriages for Task Assignment. Proceedings of the VLDB Endowment, 16(11), 3240-3252. https://doi.org/10.14778/3611479.3611522
Gkountouna, O., Doka, K., Xue, M., Cao, J. & Karras, P. (2022). One-off Disclosure Control by Heterogeneous Generalization. In 31st USENIX Security Symposium (USENIX Security 22) (pp. 3363-3377). USENIX - The Advanced Computing Systems Association. https://www.usenix.org/conference/usenixsecurity22/presentation/gkountouna
Skitsas, K., Papageorgiou, I. G., Talebi, M. S., Kantere, V., Katehakis, M. N. & Karras, P. (2022). SIFTER: Space-Efficient Value Iteration for Finite-Horizon MDPs. Proceedings of the VLDB Endowment, 16(1), 90-98. https://doi.org/10.14778/3561261.3561269
Ciaperoni, M., Gionis, A., Katsamanis, A. & Karras, P. (2022). SIEVE: A Space-Efficient Algorithm for Viterbi Decoding. In Proceedings of the 2022 International Conference on Management of Data (pp. 1136-1145). Association for Computing Machinery. https://doi.org/10.1145/3514221.3526170
Schallenberg, M., Kelly, D., Clapcott, J., Death, R., Macneil, C., Young, R., Sorrell, B. & Scarsbrook, M. (2019). Approaches to assessing ecological integrity of New Zealand freshwaters. Science for Conservation, 2019-December, Article 307.
Foldager, L., Thorup, V. M., Pastell, M., Jensen, B. B. & Krogh, M. A. (2024). Prediction of mortality in land-based recirculating aquaculture system (RAS) trout farms. In P. Linde (Ed.), Symposium i Anvendt Statistik 2024 (pp. 17-24). Økonomisk Institut, Københavns Universitet & Symposium i Anvendt Statistik. http://www.statistiksymposium.dk/Symposium 2024 WEB.pdf
Dam, M., Centanni, M., Friberg, L. E., Centanni, D., Karlsson, M. O., Stensig Lynggaard, L., Johannsdottir, I. M., Wik, H. S., Malmros, J., Vaitkeviciene, G. E., Griskevicius, L., Hallböök, H., Jónsson, Ó. G., Overgaard, U., Schmiegelow, K., Hansen, S. N., Heyman, M. & Albertsen, B. K. (2024). Increase in peg-asparaginase clearance as a predictor for inactivation in patients with acute lymphoblastic leukemia. Leukemia, 38(4), 712-719. https://doi.org/10.1038/s41375-024-02153-6
Lauterbur, M. E., Munch, K. & Enard, D. (2023). Versatile Detection of Diverse Selective Sweeps with Flex-Sweep. Molecular Biology and Evolution, 40(6), Article msad139. https://doi.org/10.1093/molbev/msad139
Yuan, C., Tang, L., Lopdell, T., Petrov, V. A., Oget-Ebrad, C., Moreira, G. C. M., Duarte, J. L. G., Sartelet, A., Cheng, Z., Salavati, M., Wathes, D. C., Crowe, M. A., GplusE Consortium, Coppieters, W., Littlejohn, M., Charlier, C., Druet, T., Georges, M. & Takeda, H. (2023). An organism-wide ATAC-seq peak catalog for the bovine and its use to identify regulatory variants. Genome Research, 33(10), 1848-1864. https://doi.org/10.1101/gr.277947.123
Chen, Y., Atashi, H., Mota, R. R., Grelet, C., Vanderick, S., Hu, H., GplusE Consortium & Gengler, N. (2023). Validating genomic prediction for nitrogen efficiency index and its composition traits of Holstein cows in early lactation. Journal of Animal Breeding and Genetics (Online), 140(6), 695-706. https://doi.org/10.1111/jbg.12819
Chen, Y., Atashi, H., Grelet, C., Mota, R. R., Vanderick, S., Hu, H., GplusE Consortium & Gengler, N. (2023). Genome-wide association study and functional annotation analyses for nitrogen efficiency index and its composition traits in dairy cattle. Journal of Dairy Science, 106(5), 3397-3410. https://doi.org/10.3168/jds.2022-22351

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