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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Auener, S., Daugbjerg, P., Nielsen, K., Rebsdorf, S. O., Sillasen, M. & Sørensen, M. J. (2022). Engineering i skolen - hvad, hvordan, hvorfor: Didaktikken. (Revideret udgave, 2022 ed.) Engineer the Future. https://engineerthefuture.dk/media/on5jncnl/engineering-didaktik_2022_web.pdf

Barzgar, S., Yan, Y., Tarik, M., Skibsted, J., Ludwig, C. & Lothenbach, B. (2022). A long-term study on structural changes in calcium aluminate silicate hydrates. Materials and Structures/Materiaux et Constructions, 55(10), Article 243. https://doi.org/10.1617/s11527-022-02080-x

Gøkhan, M. A., Sørensen, E. S. & Baad-Hansen, L. (2023). Role of dairy proteins in the reduction of capsaicin-induced oral burning pain. Physiology & Behavior, 259, Article 114036. https://doi.org/10.1016/j.physbeh.2022.114036

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Incorporating Orientation-Dependent Susceptibility Effects in the Standard Model of Diffusion in White Matter. Abstract from ISMRM Workshop on Diffusion MRI
, Amsterdam, Netherlands.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). Towards microstructure-informed QSM: A digital phantom study. Abstract from 2022 Joint Workshop on MR phase, magnetic susceptibility and electrical properties mapping, Lucca, Italy.

Sandgaard, A. D., Kiselev, V. G., Shemesh, N. & Jespersen, S. (2022). The Larmor Frequency of a White Matter Magnetic Microstructure Model with Multiple Sources. 2458. Abstract from Joint Annual Meeting ISMRM-ESMRMB
& ISMRT 31st Annual Meeting, London, United Kingdom.

Besson, M., Alison, J., Bjerge, K., Gorochowski, T. E., Høye, T. T., Jucker, T., Mann, H. M. R. & Clements, C. F. (2022). Towards the fully automated monitoring of ecological communities. Ecology Letters, 25(12), 2753-2775. https://doi.org/10.1111/ele.14123

Neumann, C., Rosenbaek, L. L., Flygaard, R. K., Habeck, M., Karlsen, J. L., Wang, Y., Lindorff-Larsen, K., Gad, H. H., Hartmann, R., Lyons, J. A., Fenton, R. A. & Nissen, P. (2022). Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity. EMBO Journal, 41(23), Article e110169. https://doi.org/10.15252/embj.2021110169

Logins, A., Li, Y. & Karras, P. (2022). On the Robustness of Diffusion in a Network under Node Attacks. IEEE Transactions on Knowledge and Data Engineering, 34(12), 5884-5895. https://doi.org/10.1109/TKDE.2021.3071081

Zhang, W., Hu, Z., Audet, J., Davidson, T. A., Kang, E., Kang, X., Li, Y., Zhang, X. & Wang, J. (2022). Effects of water table level and nitrogen deposition on methane and nitrous oxide emissions in an alpine peatland. Biogeosciences, 19(22), 5187-5197. https://doi.org/10.5194/bg-19-5187-2022

Amstrup, A. B., Bæk, I., Loeschcke, V. & Givskov Sørensen, J. (2022). A functional study of the role of Turandot genes in Drosophila melanogaster: An emerging candidate mechanism for inducible heat tolerance. Journal of Insect Physiology, 143, Article 104456. https://doi.org/10.1016/j.jinsphys.2022.104456

del Palacio Gonzalez, A., Thylstrup, B., Pedersen, M. U., Danielsen, B., Kirk, H. B. & Jensen, K. L. (2022). Design and Testing of an Aftercare Mobile App for Substance Use Among Young Adults: An Interdisicplinary Approach in Denmark. Abstract from Lisbon addictions 2022, Lisabon, Portugal.

Elliott, G. A. & Thomsen, K. (2021). The bundle of KMS state spaces for flows on a unital C*-algebra. https://doi.org/10.48550/arXiv.2109.06464

Raedschelders, T. & Stevenson, G. (2022). Proper connective differential graded algebras and their geometric realizations. European Journal of Mathematics, 8, 574-598. https://doi.org/10.1007/s40879-022-00579-9

Friis, E. M., Crane, P. R. & Pedersen, K. R. (2022). Extinct seed plant diversity in the Early Cretaceous: An enigmatic new microsporangiate fossil with Decussosporites pollen in situ. Review of Palaeobotany and Palynology, 304, Article 104716. https://doi.org/10.1016/j.revpalbo.2022.104716

Huang, X., Xiong, R., Volckaert, K., Hao, C., Biswas, D., Bianchi, M., Hofmann, P., Beck, P., Warmuth, J., Sa, B., Wiebe, J. & Wiesendanger, R. (2022). Experimental Realization of Semiconducting Monolayer Si₂Te₂ Films. Advanced Functional Materials, 32(48), Article 2208281. https://doi.org/10.1002/adfm.202208281

Friis, E. M., Crane, P. R. & Pedersen, K. R. (2022). Early and Mid-Cretaceous Aristolochiaceous Seeds from Portugal and Eastern North America. International Journal of Plant Sciences, 183(7), 587–603. https://doi.org/10.1086/721259

Friis, E. M., Crane, P. R., Pedersen, K. R. & Marone, F. (2022). Synchrotron radiation X-ray tomographic microscopy datasets for microsporangiophors with Decussosporites Brenner pollen from the Early Cretaceous (early – mid-Albian) Puddledock mesofossil flora, Virginia, U.S.A.. Dataset http://10.16907/990d0856-a655-4365-9673-7728ee207381

Weber, P. L., Pesch, C., Hermansen, C., Møldrup, P., Greve, M. H., Arthur, E., Norgaard, T. & de Jonge, L. W. (2022). Kan gletsjermel forbedre grønlandsk landbrugsjord?. Poster session presented at Grønne Sammen – Den Grønne Festival, Viborg, Denmark.

Nyemann, J. S., Nielsen, C. L., Martinez Turtos, R., Julsgaard, B., Muren, L. & Balling, P. (2023). New perspectives on traps and radiative recombination centers for optically stimulated luminescence in LiF:Mg,Cu,P. Journal of Luminescence, 255, Article 119586. https://doi.org/10.1016/j.jlumin.2022.119586

Gratzer, D., Cavallo, E., Kavvos, G. A., Guatto, A. & Birkedal, L. (2022). Modalities and Parametric Adjoints. ACM Transactions on Computational Logic, 23(3), Article 18. https://doi.org/10.1145/3514241

Abu-Samha, M. & Madsen, L. B. (2022). Multielectron effect in the strong-field ionization of aligned nonpolar molecules. Physical Review A, 106(1), Article 013117. https://doi.org/10.1103/PhysRevA.106.013117

Nielsen, C. F., Holtzapple, R. & King, B. (2022). High-resolution modeling of nonlinear Compton scattering in focused laser pulses. Physical Review D, 106(1), Article 013010. https://doi.org/10.1103/PhysRevD.106.013010

Julku, A. (2022). Nonlocal interactions and supersolidity of moiré excitons. Physical Review B, 106(3), Article 035406. https://doi.org/10.1103/PhysRevB.106.035406

Keßler, E., Sheshmani, A. & Yau, S. T. (2022). Super J -holomorphic curves: construction of the moduli space. Mathematische Annalen, 383(3-4), 1391-1449. https://doi.org/10.1007/s00208-021-02260-0

Hazay, C., Orsini, E., Scholl, P. & Soria-Vazquez, E. (2022). TinyKeys: A New Approach to Efficient Multi-Party Computation. Journal of Cryptology, 35(2), Article 13. https://doi.org/10.1007/s00145-022-09423-5

Franco-Cisterna, B., Glud, A., Bristow, L. A., Rudra, A., Sanei, H., Winding, M. H. S., Nielsen, T. G., Glud, R. N. & Stief, P. (2022). Sinking krill carcasses as hotspots of microbial carbon and nitrogen cycling in the Arctic. Frontiers in Marine Science, 9, Article 1019727. https://doi.org/10.3389/fmars.2022.1019727

Overgaard, C. K., Tao, K., Zhang, S., Christensen, B. T., Blahovska, Z., Radutoiu, S., Kelly, S. & Dueholm, M. K. D. (2022). Application of ecosystem-specific reference databases for increased taxonomic resolution in soil microbial profiling. Frontiers in Microbiology, 13, Article 942396. https://doi.org/10.3389/fmicb.2022.942396

Arranz, P., Christiansen, F., Glarou, M., Gero, S., Visser, F., Oudejans, M. G., Aguilar de Soto, N. & Sprogis, K. (2022). Body Condition and Allometry of Free-Ranging Short-Finned Pilot Whales in the North Atlantic. Sustainability, 14(22), Article 14787. https://doi.org/10.3390/su142214787

Petersen, K. V., Tesauro, C., Hede, M. S., Pages, C., Marcussen, L. B., Keller, J. G., Bugge, M., Holm, K., Bjergbæk, L., Stougaard, M., Wejse, C. & Knudsen, B. R. (2022). Rolling Circle Enhanced Detection of Specific Restriction Endonuclease Activities in Crude Cell Extracts. Sensors, 22(20), Article 7763. https://doi.org/10.3390/s22207763

Lassen, L. B., Thomsen, M. S., Basso, E., Füchtbauer, E. M., Füchtbauer, A., Outeiro, T. F., Jensen, P. H. & Moos, T. (2022). Mutation of Tyrosine Sites in the Human Alpha-Synuclein Gene Induces Neurotoxicity in Transgenic Mice with Soluble Alpha-Synuclein Oligomer Formation. Cells, 11(22), Article 3673. https://doi.org/10.3390/cells11223673

Ovad, T., Sapunar, M., Sršeň, Š., Slavíček, P., Mašín, Z., Jones, N. C., Hoffmann, S. V., Ranković, M. & Fedor, J. (2023). Excitation and fragmentation of the dielectric gas C₄F₇N: electrons vs. photons. The Journal of Chemical Physics, 158(1), Article 014303. https://doi.org/10.1063/5.0130216

Gethöffer, F., Liebing, J., Ronnenberg, K., Curland, N., Puff, C., Wohlsein, P., Baumgärtner, W., Bücking, B., Heffels-Redmann, U., Voigt, U., Sonne, C., Lierz, M. & Siebert, U. (2022). The modulating effect of food composition on the immune system in growing ring-necked pheasants (Phasianus colchicus). PLoS One, 17(11), Article e0277236. https://doi.org/10.1371/journal.pone.0277236

Guarnieri, G., Mitchison, M. T., Purkayastha, A., Jaksch, D., Buča, B. & Goold, J. (2022). Time periodicity from randomness in quantum systems. Physical Review A, 106(2), Article 022209. https://doi.org/10.1103/PhysRevA.106.022209

Holm, E. B., Tram, T. & Hannestad, S. (2022). Decaying warm dark matter revisited. Journal of Cosmology and Astroparticle Physics, 2022(8), Article 044. https://doi.org/10.1088/1475-7516/2022/08/044

Daniel, G. (2022). Normalization for Multimodal Type Theory. In Proceedings of the 37th Annual ACM/IEEE Symposium on Logic in Computer Science, LICS 2022 Article 2 Association for Computing Machinery. https://doi.org/10.1145/3531130.3532398

Christiansen, M. P. V., Rønne, N. & Hammer, B. (2022). Atomistic global optimization X: A Python package for optimization of atomistic structures. Journal of Chemical Physics, 157(5), Article 054701. https://doi.org/10.1063/5.0094165

Meisl, G., Xu, C. K., Taylor, J. D., Michaels, T. C. T., Levin, A., Otzen, D., Klenerman, D., Matthews, S., Linse, S., Andreasen, M. & Knowles, T. P. J. (2022). Uncovering the universality of self-replication in protein aggregation and its link to disease. Science Advances, 8(32), Article eabn6831. https://doi.org/10.1126/sciadv.abn6831

Friis, E. M., Crane, P. R., Pedersen, K. R. & Marone, F. (2022). Synchrotron radiation X-ray tomographic microscopy datasets for aristolochiaceous seeds from the Early Cretaceous of Portugal and North America. Dataset http://10.16907/bacdd377-981b-4934-8938-7eb9d8006224

Normand, S., Egemose, S., Kaae, B. C., Madsen, N., Olsen, B. E., Rahbek, C., Strange, N., Svenning, J.-C. & Timmermann, K. (2022). Fra tab til fremgang: Beskyttet natur i Danmark i et internationalt perspektiv. Biodiversitetsrådet. https://www.biodiversitetsraadet.dk/pdf/2022/11/Biodiversitetetsraadet-2022-Fra-tab-til-fremgang-Beskyttet-natur-i-Danmark-i-et-internationalt-perspektiv-291122.pdf

Bjergbæk, L. (2022). Celler deler os. Aarhus Universitetsforlag. ScienceFaction Vol. 1

Bjergbæk, L. (2020). DNA. In DNA Aarhus Universitetsforlag.

Vindbæk, S. H., Muren, L., Balling, P., Petersen, J. B. B., Valdetaro, L. & Poulsen, P. R. (2022). Dose perturbations in proton pencil beam delivery investigated by dynamically deforming silicone-based radiochromic dosimeters. Physics in Medicine and Biology, 67(23), Article 235002. https://doi.org/10.1088/1361-6560/ac9fa2

Holtzapple, R., Nielsen, C. F., Sørensen, A. H., Uggerhøj, U. I. & (CERN NA63 Collaboration) (2022). On the significance of radiation reaction. European Physics Journal D, 76(9), Article 167. https://doi.org/10.1140/epjd/s10053-022-00496-2

Jørgensen, P. & Shah, A. (2024). Grothendieck groups of d-exangulated categories and a modified Caldero-Chapoton map. Journal of Pure and Applied Algebra, 228(5), Article 107587. https://doi.org/10.1016/j.jpaa.2023.107587

Jørgensen, P. & Shah, A. (2024). The index with respect to a rigid subcategory of a triangulated category. International Mathematics Research Notices, 2024(4), 3278-3309. https://doi.org/10.1093/imrn/rnad130

Shah, A. (2023). Krull-Remak-Schmidt decompositions in Hom-finite additive categories. Expositiones Mathematicae, 41(1), 220-237. https://doi.org/10.1016/j.exmath.2022.12.003

Holm, S., Larsen, R. M., Holst, C. M., Heide-Jørgensen, M. P., Steffensen, J. F., Stevnsner, T. & Larsen, K. (2023). Bowhead NEIL1: molecular cloning, characterization, and enzymatic properties. Biochimie, 206, 136-149. https://doi.org/10.1016/j.biochi.2022.10.014

Kløve, M., Sommer, S., Iversen, B. B., Hammer, B. & Dononelli, W. (2022). Machine learning based approach for solving atomic structures of nanomaterials combining pair distribution functions with density functional theory.

Antaki, D., Guevara, J., Maihofer, A. X., Klein, M., Gujral, M., Grove, J., Carey, C. E., Hong, O., Arranz, M. J., Hervas, A., Corsello, C., Vaux, K. K., Muotri, A. R., Iakoucheva, L. M., Courchesne, E., Pierce, K., Gleeson, J. G., Robinson, E. B., Nievergelt, C. M. & Sebat, J. (2022). A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex. Nature Genetics, 54(9), 1284-1292. https://doi.org/10.1038/s41588-022-01064-5

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Anne Kirstine Mehlsen