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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Herskind, P. F., Dantan, A., Albert, M., Marler, J. & Drewsen, M. (2009). Positioning of the rf potential minimum line of a linear Paul trap with micrometer precision. Journal of Physics B: Atomic, Molecular and Optical Physics, 42(154008). https://doi.org/10.1088/0953-4075/42/15/154008

Herrmann, R., Olsen, S., Petersen, J. B. B., Holzscheiter, M. & Bassler, N. (2009). Depth-Dose and LET Distributions of Antiproton Beams in Various Target Materials. Poster session presented at 10th BIENNIAL ESTRO CONFERENCE ON PHYSICS AND RADIATION TECHNOLOGY FOR CLINICAL RADIOTHERAPY, Maastricht, Netherlands.

Jampeetong, A. & Brix, H. (2009). Effects of NaCl salinity on growth, morphology, photosynthesis and prolineaccumulation of Salvinia natans. Aquatic Botany, 91, 181-186.

de la Torre, L., Muriel, P. & Balslev, H. (2006). Etnobotánica en los Andes del Ecuador. In M. Moraes & B. Øllgaard (Eds.), Plantas económicamente importantes de los Andes Centrales

de la Torre, L., Calvo-Irabién, L. M., Salazar, C., Balslev, H. & Borchsenius, F. (2009). Contrasting palm species and use diversity in the Yucatan Peninsula and the Ecuadorian Amazon. Biodiversity and Conservation, 18, 2837-2853. https://doi.org/10.1007/s10531-009-9610-x

Zieger, K., Wiuf, C. H., Jensen, K. M.-E., Ørntoft, T. F. & Andersen, L. D. (2009). Chromosomal imbalance in the progression of high-risk non-muscle invasive bladder cancer. B M C Cancer, 9, 149.

Pasgaard Bertelsen, H., Andersen, P. K., Nielsen, R. O., Panitz, F. & Bendixen, C. (2009). Identifying rare genetic variants of milk genes. Poster session presented at EADGene, Paris, France.

Larsen, K., Hedegaard, C., Bertelsen, M. F. & Bendixen, C. (2009). Threonine 53 in α-synuclein is conserved in long-living non-primate animals. Biochemical and Biophysical Research Communications, 387(3), 602-605. https://doi.org/10.1016/j.bbrc.2009.07.070

Balslev, H. & Zuluaga, A. (2009). Flora de Colombia - Juncaceae: Juncaceae. Universidad Navcional de Colombia.

Kahveci, D., Guo, Z., Ozcelik, B. & Xu, X. (2009). Lipase-catalyzed Glycerolysis in Ionic Liquids Directed towards Diglyceride Synthesis. Abstract from 25^th LipidForum Symposium, Elsinore, Denmark.

Merte, L. R., Knudsen, J., Grabow, L. C., Vang, R. T., Lægsgaard, E., Mavrikakis, M. & Besenbacher, F. (2009). Correlating STM contrast and atomic-scale structure by chemical modification: Vacancy dislocation loops on FeO/Pt(111). Surface Science, 603, L15-L18. https://doi.org/10.1016/j.susc.2008.11.014

Uyar, T., Havelund, R., Zhou, X., Hacaloglu, J., Besenbacher, F. & Kingshott, P. (2009). The formation and characterization of cyclodextrin functionalized nanofibers produced by electrospinning. Nanotechnology, 20(12), 125605.

Matthiesen, J., Wendt, S., Hansen, J. Ø., Madsen, G. K. H., Salazar, E. L., Galliker, P., Vestergaard, E. K., Schaub, R., Lægsgaard, E., Hammer, B. & Besenbacher, F. (2009). Observation of all the intermediate steps of a chemical reaction on an oxide surface by scanning tunneling microscopy. A C S Nano, 3, 517-526.

Uyar, T., Havelund, R., Nur, Y., Hacaloglu, J., Besenbacher, F. & Kingshott, P. (2009). Molecular filters based on cyclodextrin functionalized electrospun fibers. Journal of Membrane Science, 332, 129-137.

Dolatshahi-Pirouz, A., Jensen, T. H. L., Foss, M., Chevallier, J. & Besenbacher, F. (2009). Enhanced surface activation of fibronectin upon adsorption on hydroxyapatite. Langmuir, 25, 2971.

Dolatshahi-Pirouz, A., Skeldal, S., Hovgaard, M. B., Jensen, T. H. L., Foss, M., Chevallier, J. & Besenbacher, F. (2009). Influence of nano-roughness and the detailed surface morphology on the structural properties and water coupling capabilities of surface bound fibrinogen films. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 113(11), 4406.

Matthiesen, J., Hansen, J. Ø., Wendt, S., Salazar, E. L., Schaub, R., Lægsgaard, E., Besenbacher, F. & Hammer, B. (2009). Formation and diffusion of water dimers on rutile TiO2(110). Physical Review Letters, 102, 226101. https://doi.org/10.1103/PhysRevLett.102.226101

Uyar, T., Hacaloglu, J. & Besenbacher, F. (2009). Electrospun polystyrene fibers containing high temperature stable volatile fragrance/flavor facilitated by cyclodextrin inclusion complexes. Reactive and Functional Polymers, 69, 145-150. https://doi.org/10.1016/j.reactfunctpolym.2008.12.012

Uyar, T. & Besenbacher, F. (2009). Electrospinning of cyclodextrin functionalized polyethylene oxide (PEO) nanofibers. European Polymer Journal, 45, 1032-1037. https://doi.org/10.1016/j.eurpolymj.2008.12.024

Jørgensen, J.-E., Staun Olsen, J. & Gerward, L. (2009). On the compressibility of BaFe₂As₂. Solid State Communications, 149, 1161-1163.

Overgaard, J., Jones, C., Stasch, A. & Iversen, B. B. (2009). Experimental Electron Density Study of the Mg-Mg Bonding Character in a Magnesium(I) Dimer. Journal of the American Chemical Society, 131, 4208-4209.

Poulsen, R. D., Overgaard, J., Schulman, A., Østergaard, C., Murillo, C. A., Spackman, M. A. & Iversen, B. B. (2009). Effects of Weak Intermolecular Interactions on the Molecular Isomerism of Tricobalt Metal Chains. Journal of the American Chemical Society, 131, 7580-7591.

Jørgensen, M. R. V., Clausen, H. F., Chen, Y.-S. & Iversen, B. B. (2009). Synchrotron charge density study of isostructural coordination polymers. Poster session presented at Sagamore XVI, Santa Fe, NM, United States.

Wang, X.-S., Ma, S., Yuan, D., Yoon, J. W., Hwang, Y. K., Chang, J.-S., Wang, X., Jørgensen, M. R. V., Chen, Y.-S. & Zhou, H.-C. (2009). A Large-Surface-Area Boracite-Network-Topology Porous MOF Constructed from a Conjugated Ligand Exhibiting a High Hydrogen Uptake Capacity. Inorganic Chemistry, 48, 7519-7521.

Uyar, T., Nur, Y., Hacaloglu, J. & Besenbacher, F. (2009). Electrospinning of functional poly(methyl methacrylate) nanofibers containing cyclodextrin-menthol inclusion complexes. Nanotechnology, 20, 125703.

Uyar, T., Cianga, I., Cianga, L., Besenbacher, F. & Yagci, Y. (2009). Self-aligned and bundled electrospun fibers prepared from blends of polystyrene (PS) and poly (methyl methacrylate) (PMMA) with a hairy-rod polyphenylene copolymer. Materials Letters, 63, 1638-1641. https://doi.org/10.1016/j.matlet.2009.04.039

Jakobsen, M., Stenderup, K., Rosada, C., Moldt, B., Kamp, S., Dam, T. N., Jensen, T. G. & Mikkelsen, J. G. (2009). Amelioration of Psoriasis by Anti-TNF-alpha RNAi in the Xenograft Transplantation Model. Molecular Therapy. https://doi.org/10.1038/mt.2009.141

Han, K., Ashenfelter, J., Chikanian, A., Emmet, W., Finch, L. E., Heinz, A., Madsen, J., Majka, R. D., Monreal, B. & Sandweiss, J. (2009). Search for Stable Strange Quark Matter in Lunar Soil. Physical Review Letters, 103(092302). https://doi.org/10.1103/PhysRevLett.103.092302

Kragh, H. (2009). Continual fascination: The oscillating universe in modern cosmology. Science in Context, 22(4), 587-612. https://doi.org/10.1017/S0269889709990172

Kjeldsen, K. U., Tang, L., Jørgensen, M. G. & Ingvorsen, K. (2009). Enumeration and identification of dominant types of sulfate-reducing bacteria in pulp from a paper-recycling plant: a multiphasic approach. F E M S Microbiology Ecology, 69(3), 481-493.

Kjeldsen, K. U., Jakobsen, T. F., Glastrup, J. & Ingvorsen, K. (2010). Desulfosalsimonas propionicica gen. nov. sp. nov., a halophilic, sulfate-reducing member of the family Desulfobacteraceae isolated from a salt-lake sediment. International Journal of Systematic and Evolutionary Microbiology, 60, 1060-1065. https://doi.org/10.1099/ljs.0.014746-0

Kjellerup, B. V., Kjeldsen, K. U., Lopes, F., Abildgaard, L., Ingvorsen, K., Froelund, B., Sowers, K. R. & Nielsen, P. H. (2009). Biocorrosion and biofilm formation in a nutrient limited heating system subjected to alternating microaerophilic conditions. Biofouling, 25(8), 727-737.

Balog, R., Jørgensen, B., Wells, J., Lægsgaard, E., Hofmann, P., Besenbacher, F. & Hornekær, L. (2009). Atomic hydrogen adsorbate structures on graphene. Journal of the American Chemical Society, 131(25), 8744. https://doi.org/10.1021/ja902714h

Sljivancanin, Z., Rauls, E., Hornekær, L., Xu, W., Besenbacher, F. & Hammer, B. (2009). Extended atomic hydrogen dimer configurations on the graphite (0001) surface. Journal of Chemical Physics, 131, 084706.

Ravnsbæk, D., Filinchuk, Y., Cerenius, Y., Jakobsen, H. J., Besenbacher, F., Skibsted, J. & Jensen, T. R. (2009). A series of mixed-metal borohydrides. Angewandte Chemie International Edition, 48, 6659-6663.

Schnadt, J., Knudsen, J., Hu, X. L., Michaelides, A., Vang, R. T., Reuter, K., Li, Z., Lægsgaard, E., Scheffler, M. & Besenbacher, F. (2009). Experimental and theoretical study of oxygen adsorption structures on Ag(111). Physical Review B, 80, 075424.

Kristensen, T. G. (2009). Recombining Angles in Differential Evolution. In IEEE Congress on Evolutionary Computation, CEC 2009 (pp. 3353 - 3356). IEEE Press. https://doi.org/10.1109/CEC.2009.4983370

Kristensen, T. G. & Pedersen, C. S. (2009). Optimal Overlay of Ligands with Flexible Bonds Using Differential Evolution. In J. Zhang, G.-Z. Li & J. Y. Yang (Eds.), Proceedings of the 2009 International Joint conferences on Bioinformatics, System biology and Intelligent Computing (IJCBS2009) (pp. 331-334). IEEE Computer Society Press. https://doi.org/10.1109/IJCBS.2009.36

Kristensen, T. G., Pedersen, C. S., Thomsen, R. & Christensen, M. H. (2009). Largest Common Chemical Feature Subtree as a Virtual Screening Method. Poster session presented at 17th Annual International Conference on Intelligent Systems for Molecular Bioligy (ISMB) & 8th European Conference on Computational Biology (ECCB), Stockholm, Sweden. http://www.iscb.org/ismbeccb2009/poster_list.php?cat=C

Morueta-Holme, N., Fløjgaard, C. & Svenning, J.-C. (2009). Climate change risks and conservation possibilities for a threatened European endemic mammal (Iberian desman, Galemys pyrenaicus). Poster session presented at Beyond Kyoto, Aarhus, Denmark.

Send, R., Sundholm, D., Johansson, M. P. & Pawlowski, F. (2009). Excited State Potential Energy Surfaces of Polyenes and Protonated Schiff Bases. Journal of Chemical Theory and Computation, 5, 2401-2414. https://doi.org/10.1021/ct900240s

Dittmer, J., Thøgersen, L., Underhaug, J., Bertelsen, K., Vosegaard, T., Pedersen, J. M., Schiøtt, H. B., Tajkhorshid, E., Skrydstrup, T. & Nielsen, N. C. (2009). Incorporation of Antimicrobial Peptides into Membranes: A Combined Liquid-State NMR and Molecular Dynamics Study of Alamethicin in DMPC/DHPC Bicelles. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113(19), 6928-6937. https://doi.org/10.1021/jp811494p

Thøgersen, L. (2009). Protein Domain Model: A preliminary exploration. Poster session presented at Faraday Discussion: Multiscale Modelling of Soft Matter, Groningen, Netherlands.

Nielsen, K. H. (2009). På jagt efter søslangen: Galathea-ekspeditionen 1950-52. Aarhus Universitetsforlag.

Nielsen, K. H. (2009). Tilfældets lovmæssighed. Videnskab.dk.

Preker, P., Nielsen, J., Schierup, M. H. & Jensen, T. H. (2009). RNA polymerase plays both sides: Vivid and bidirectional transcription around and upstream of active promoters. Cell Cycle, 8(8), 1106-1107.

Qu, X., Lykke-Andersen, S., Nasser, T., Saguez, C., Bertrand, E., Jensen, T. H. & Moore, C. (2009). Assembly of an export-competent mRNP is needed for efficient release of the 3' end processing complex after polyadenylation. Molecular and Cellular Biology, 29(19).

Laursen, M., Bublitz, M., Moncoq, K., Olesen, C., Møller, J. V., Young, H., Nissen, P. & Morth, J. P. (2009). Cyclopiazonic Acid Is Complexed to a Divalent Metal Ion When Bound to the Sarcoplasmic Reticulum Ca2+-ATPase. Journal of Biological Chemistry, 284(20), 13513-13518.

Nielsen, K. H. (2009). Den sidste frie forsker. Aktuel Naturvidenskab, (3), 38-39.

Jørgensen, J. M., Sørensen, F. B., Bendix, K., Nielsen, J. L., Funder, A., Karkkainen, M. J., Tainola, T., Sørensen, A. B., Pedersen, F. S. & D'Amore, F. (2009). Expression level, tissue distribution pattern, and prognostic impact of vascular endothelial growth factors VEGF and VEGF-C and their receptors Flt-1, KDR, and Flt-4 in different subtypes of non-Hodgkin lymphomas. Leukemia & Lymphoma, 50(10), 1647-1660. https://doi.org/10.1080/10428190903156729, https://doi.org/10.1080/10428190903156729

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Anne Kirstine Mehlsen