Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Sanchez-Martinez, P., Dexter, K. G., Draper, F. C., Baraloto, C., Leão do Amaral, I., de Souza Coelho, L., de Almeida Matos, F. D., de Andrade Lima Filho, D., Salomão, R. P., Wittmann, F., Castilho, C. V., de Jesus Veiga Carim, M., Guevara, J. E., Phillips, O. L., Magnusson, W. E., Sabatier, D., Cardenas Revilla, J. D., Molino, J. F., Irume, M. V. ... ter Steege, H. (2025). Phylogenetic conservatism in the relationship between functional and demographic characteristics in Amazon tree taxa. Functional Ecology, 39(1), 181-198. https://doi.org/10.1111/1365-2435.14700

Stubkjær, R. B., Kløve, M., Bertelsen, A., Borup, A. B., Roelsgaard, M. & Iversen, B. B. (2025). Reliability of pair distribution function analysis in in situ experiments. Journal of Applied Crystallography, 58(2), 495-503. https://doi.org/10.1107/S1600576725001694

Ettenhuber, P., Hansen, M. B., Poier, P. P., Shaik, I., Rasmussen, S. E., Madsen, N. K., Majland, M., Jensen, F., Olsen, L. & Zinner, N. T. (2025). Calculating the Energy Profile of an Enzymatic Reaction on a Quantum Computer. Journal of Chemical Theory and Computation, 21(7), 3493-3503. https://doi.org/10.1021/acs.jctc.5c00022

Andersen, L. & Birkbak, N. J. (2025). Advancing circulating tumor DNA detection: Using whole-genome sequencing to power minimal residual disease monitoring in breast cancer. Annals of Oncology, 36(6), 609-611. https://doi.org/10.1016/j.annonc.2025.03.008

Agarwal, A., Bienstock, A., Damgård, I. & Escudero, D. (2025). Honest Majority GOD MPC with O(depth(C)) Rounds and Low Online Communication. In K.-M. Chung & Y. Sasaki (Eds.), Advances in Cryptology – ASIACRYPT 2024 - 30th International Conference on the Theory and Application of Cryptology and Information Security, Proceedings (pp. 234-265). Springer Nature. https://doi.org/10.1007/978-981-96-0938-3_8

Thomsen, S. R., Høyer, N. M., Højlund, M. G. & Christiansen, O. (2025). Local Bond-Stretch Coordinates for Anharmonic Vibrational Computations. The journal of physical chemistry. A, 129(15), 3522-3536. https://doi.org/10.1021/acs.jpca.4c07704

Xian, J., He, Z., Hu, X., Liu, L., Auken, E., Revil, A. & Cai, H. (2025). Groundwater Mapping and Modeling Using Towed Transient Electromagnetic Data Based on Deep Learning. IEEE Transactions on Geoscience and Remote Sensing, 63, Article 5900812. https://doi.org/10.1109/TGRS.2024.3509526

Salmaso, I., Cappellaro, E., Tartaglia, L., Anderson, J. P., Benetti, S., Bronikowski, M., Cai, Y. Z., Charalampopoulos, P., Chen, T. W., Concepcion, E., Elias-Rosa, N., Galbany, L., Gromadzki, M., Gutiérrez, C. P., Kankare, E., Lundqvist, P., Matilainen, K., Mazzali, P. A., Moran, S. ... Valerin, G. (2025). The diversity of strongly interacting Type IIn supernovae. Astronomy and Astrophysics, 695, Article A29. https://doi.org/10.1051/0004-6361/202451764

Lindkvist, T. T., Djavani-Tabrizi, I., Andersen, L. H. & Nielsen, S. B. (2025). Turning on the Fluorescence from Isolated GFP Chromophore Anions at Cryogenic Temperatures. Physical Review Letters, 134(9), Article 093001. https://doi.org/10.1103/PhysRevLett.134.093001

de Jong, M. J., Anaya, G., Niamir, A., Pérez-González, J., Broggini, C., del Pozo, A. M., Nebenfuehr, M., de la Peña, E., Ruiz-Olmo, J., Seoane, J. M., Vedel, G., Barboiron, A., Bartoš, L., Buzan, E., Carden, R. F., Darchiashvili, G., Frantz, A. C., Gačić, D., Gérard, A. ... Janke, A. (2025). Red Deer Resequencing Reveals the Importance of Sex Chromosomes for Reconstructing Late Quaternary Events. Molecular Biology and Evolution, 42(2), Article msaf031. https://doi.org/10.1093/molbev/msaf031

Ni, S., Müter, D., Charrieau, L. M., Pirzamanbein, B., Choquel, C., Knudsen, K. L., Seidenkrantz, M. S. & Filipsson, H. L. (2025). Morphological Insights From Benthic Foraminifera for Environmental Conditions in the Baltic Sea During the Last Interglacial. Paleoceanography and Paleoclimatology, 40(3), Article e2024PA005063. https://doi.org/10.1029/2024PA005063

Sandeep, R., Madsen, J. S., Marzocchi, U. & Vergeynst, L. (2025). Synergizing carbon and phosphorus recovery from wastewater: Integrating biofilm-based phosphorus removal in high-rate activated sludge. Water Research, 280, Article 123546. https://doi.org/10.1016/j.watres.2025.123546

Stanić, I., Kajan, K., Selak, L. & Orlić, S. (2025). Environmental drivers of microbial assembly and stability in lakes across biogeographical regions. Ecological Indicators, 172, Article 113324. https://doi.org/10.1016/j.ecolind.2025.113324

Touzot, M., Holmstrup, M., Sørensen, J. G. & Slotsbo, S. (2025). Gain of thermal tolerance through acclimation is quicker than the loss by de-acclimation in the freeze-tolerant potworm, Enchytraeus albidus. Journal of Experimental Biology, 228(5), Article jeb249675. https://doi.org/10.1242/jeb.249675

Wang, L., Wei, F., Tagesson, T., Fang, Z. & Svenning, J. C. (2025). Transforming forest management through rewilding: Enhancing biodiversity, resilience, and biosphere sustainability under global change. One Earth, 8(3), Article 101195. https://doi.org/10.1016/j.oneear.2025.101195

Murakami, Y., Hansen, T., Takayoshi, S., Madsen, L. B. & Werner, P. (2025). Many-Body Effects on High-Harmonic Generation in Hubbard Ladders. Physical Review Letters, 134(9), Article 096504. https://doi.org/10.1103/PhysRevLett.134.096504

Khani, P. & Assent, I. (2025). Causal Banzhaf Value for Aggregate Query Explanations. CEUR Workshop Proceedings, 3931, 54-58.

Smith, Z. L., Dickinson, H. J., Fraser, H. J., McClure, M. K., Noble, J. A., Boogert, A. C. A., Sun, F., Egami, E., Dartois, E., Erkal, J., Shimonishi, T., Beck, T. L., Bergner, J. B., Caselli, P., Charnley, S. B., Chu, L., Drozdovskaya, M. N., Garrod, R., Harsono, D. ... van Dishoeck, E. F. (2025). Cospatial ice mapping of H₂O with CO₂ and CO across a molecular cloud with JWST/NIRCam. Nature Astronomy, 9(6), 883-894. https://doi.org/10.1038/s41550-025-02511-z

Mantoani, M. C., Sapucci, C. R., Guerra, L. C. C., Andrade, M. F., Dias, M. A. F. S., Dias, P. L. S., Albrecht, R. I., Silva, E. P., Rodrigues, F., Araujo, G. G., Galante, D., Silva, D. M. C., Martins, J. A., Martins, L. D., Boschilia, S. M., Phillips, V. T. J., Carotenuto, F., Šantl-Temkiv, T., Morris, C. E. & Gonçalves, F. L. T. (2025). Airborne fungal spore concentrations double but diversity decreases with warmer winter temperatures in the Brazilian Atlantic Forest biodiversity hotspot. The Microbe, 7, Article 100300. https://doi.org/10.1016/j.microb.2025.100300

Wieber, C., Jensen, L. Z., Vergeynst, L., Meire, L., Juul-Pedersen, T., Finster, K. & Šantl-Temkiv, T. (2025). Terrestrial runoff is an important source of biological ice-nucleating particles in Arctic marine systems. Atmospheric Chemistry and Physics, 25(6), 3327-3346. https://doi.org/10.5194/acp-25-3327-2025

Skydsgaard, M. A. (2025, Mar 1). Covid-19-epidemien i Danmark, 2020-2022. danmarkshistorien.dk, Aarhus Universitet. https://danmarkshistorien.lex.dk/Covid-19-epidemien_i_Danmark,_2020-2022

Moos, M., Overgaard, J., Hůla, P., Byrge, C. G., Šmilauer, P., Nedvěd, O. & Koštál, V. (2025). Metabolomic signatures associated with cold adaptation and seasonal acclimation of Drosophila: profiling of 43 species. Journal of Experimental Biology, 228(5), Article jeb250076. https://doi.org/10.1242/jeb.250076

Friis, E. M., Crane, P. R. & Pedersen, K. R. (2025). The Cretaceous diversification of angiosperms: perspectives from mesofossils. In M. B. Hart, S. J. Batenburg, B. T. Huber, G. D. Price, N. Thibault, M. Wagreich & I. Walaszczyk (Eds.), Cretaceous Project 200 Volume 1: the Cretaceous World (1 ed., Vol. 544, pp. 393-432). Geological Society, London. https://doi.org/10.1144/SP544-2023-170

Ito, K. & Skibsted, E. (2025). Scattering theory for C ² long-range potentials. Journal of Spectral Theory, 15(1), 353-439. https://doi.org/10.4171/JST/549

López-Blanco, E., Väisänen, M., Salmon, E., Jones, C. P., Schmidt, N. M., Marttila, H., Lohila, A., Juutinen, S., Scheller, J. & Christensen, T. R. (2025). The net ecosystem carbon balance (NECB) at catchment scales in the Arctic. Frontiers in Environmental Science, 13, Article 1544586. https://doi.org/10.3389/fenvs.2025.1544586

Kofod Petersen, A., Forgie, A., Villesen, P. & Staun Larsen, L. (2025). 3D dental similarity quantification in forensic odontology identification. Forensic Science International, 370, Article 112462. https://doi.org/10.1016/j.forsciint.2025.112462

Cominetti, E., Simplicio, M., Aranha, D. F., Matias, P. & Araujo, R. (2026). E2Easy: a simple lattice-based in-person end-to-end voting scheme. In B. Haslhofer, J. Xu, F. Victor, M. Bartoletti, A. Bracciali, K. Matsuura, J. Nabrzyski, V. Estrada-Galiñanes, C. Tessone, J. Budurushi & K. Marky (Eds.), Financial Cryptography and Data Security. FC 2025 International Workshops - CoDecFin, FinTeAchin, VOTING, 2025, Revised Selected Papers (pp. 281-296). Springer. https://doi.org/10.1007/978-3-032-00495-6_16

Nielsen, K. H. (2025). Den lange kamp om lymfekarrene. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2025). Anonyme tip om snyd. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2025). KUDOS-normerne som ramme for undervisning i fagets videnskabsteori. Abstract from Dansk Filosofisk Selskabs Årsmøde , Odense. https://static1.squarespace.com/static/651d25e94424bb0c09ddcbb0/t/67ca8fbb4ddd7329372ecd32/1741328316976/f%C3%A6rdigt+program+DFS25+7-3-25.pdf

Kossoski, F., Mendes, M., Lozano, A. I., Rodrigues, R., Jones, N. C., Hoffmann, S. V. & Ferreira da Silva, F. (2025). Vacuum ultraviolet spectroscopy of pyrimidine derivatives: the effect of halogenation. Physical Chemistry Chemical Physics, 27(18), 9687-9701. https://doi.org/10.1039/D5CP00198F

Burastero, O., Jones, N. C., Defelipe, L. A., Zavrtanik, U., Hadži, S., Hoffmann, S. V. & Garcia Alai, M. M. (2025). ChiraKit: an online tool for the analysis of circular dichroism spectroscopy data. Nucleic Acids Research, 53(W1), W158-W168. Article gkaf350. https://doi.org/10.1093/nar/gkaf350

Roman, J., Abraham, A. J., Kiszka, J. J., Costa, D. P., Doughty, C. E., Friedlaender, A., Hückstädt, L. A., Marcondes, M., Wetsel, E. & Pershing, A. J. (2025). Migrating baleen whales transport high-latitude nutrients to tropical and subtropical ecosystems. Nature Communications, 16(1), Article 2125. https://doi.org/10.1038/s41467-025-56123-2

Vela, I. Y., Jensen, P. E., Nebel, L. & Kelstrup, P. H. (2025). Method and System for Soil and Groundwater In Situ Redox Potential (Eh) Logging. ACS ES&T Water, 5(3), 1075-1085. https://doi.org/10.1021/acsestwater.4c00200

Aranha, D. F., Guimaraes, A., Hoffman, C. & Méaux, P. (2025). Secure and efficient transciphering for FHE-based MPC. IACR Transactions of Cryptographic Hardware and Embedded Systems, 2025(3), 745-780. https://doi.org/10.46586/tches.v2025.i3.745-780

Out, W. A., Kveiborg, J., Jensen, P. M., Andersen, C. S., Andonova-Katsarski, M., Hammers, N., Kanstrup, M., Ritchie, K. C., Stenner, C. & Linaa, J. (2025). Interregional networks in the late Viking Age? Insights from a burned pit house in the Viking-Age town of Aros, present-day Aarhus, Denmark (ca. 980 CE). Journal of Archaeological Science: Reports, 64, Article 105096. https://doi.org/10.1016/j.jasrep.2025.105096

Hochreuter, K., Buti, G., Ajdari, A., Bridge, C. P., Sharp, G. C., Jespersen, S., Lukacova, S., Bortfeld, T. & Kallehauge, J. F. (2025). Investigating the potential of diffusion tensor atlases to generate anisotropic clinical tumor volumes in glioblastoma patients. Physics and Imaging in Radiation Oncology, 33, Article 100688. https://doi.org/10.1016/j.phro.2024.100688

Gloriam, D., Thorsen, T., Kulkarni, Y., Sykes, D., Bøggild, A., Drace, T., Hompluem, P., Iliopoulos-Tsoutsouvas, C., Nikas, S., Daver, H., Makriyannis, A., Nissen, P., Gajhede, M., Veprintsev, D., Boesen, T. & Kastrup, J. (2024). Structural basis of Δ9-THC analog activity at the Cannabinoid 1 receptor. Research square https://doi.org/10.21203/rs.3.rs-4277209/v1

Nair, N., Pillai, A., Rizzoli, R., Falcao, B. P., Summonte, C., Pereira, R. N., Nylandsted Larsen, A., Balling, P. & Ram, S. (2025). Assessment of the Light-trapping Potential of Nanowrinkle Textures for Enhanced Photovoltaic Performance. Optical Materials, 164, Article 117026. https://doi.org/10.1016/j.optmat.2025.117026

NASA PANGEA Scoping (2025). The PANGEA Scoping Study Final Report: The PAN tropical investigation of bioGeochemistry and Ecological Adaptation (PANGEA): Scoping a NASA-Sponsored Field Campaign. ORNL Distributed Active Archive Center. https://doi.org/10.3334/ORNLDAAC/2405

Ter Steege, H., Poorter, L., Aguirre-Gutiérrez, J., Fortunel, C., Magnusson, W. E., Phillips, O. L., Pos, E., Luize, B. G., Baraloto, C., Guevara, J. E., Endara, M. J., Baker, T. R., Umaña, M. N., van der Sande, M., Pombo, M. M., McGlone, M., Draper, F. C., do Amaral, I. L., Coelho, L. D. S. ... Pickavance, G. (2025). Functional composition of the Amazonian tree flora and forests. Communications Biology, 8(355), 355. https://doi.org/10.1038/s42003-025-07768-8

Rydder, P. M., Andreasen, L., Thomsen, S. H., Jensen, U. B., Becher, N., Dunø, M. & Vogel, I. (2025). Mosaic STS gene deletions in chorionic villus samples are often confined to the placenta, and they differ in size from STS gene deletions in patients with X-linked Ichthyosis. Placenta, 165, 16-22. https://doi.org/10.1016/j.placenta.2025.03.016

Dallaire, X., Normandeau, E., Brazier, T., Harris, L., Hansen, M. M., Mérot, C. & Moore, J. S. (2025). Leveraging Whole Genomes, Mitochondrial DNA and Haploblocks to Decipher Complex Demographic Histories: An Example From a Broadly Admixed Arctic Fish. Molecular Ecology, 34(10), Article e17772. https://doi.org/10.1111/mec.17772

Qin, Q., Wei, P., Usman, S., Ahamefule, C. S., Jin, C., Wang, B., Yan, K., van Aalten, D. M. F. & Fang, W. (2025). Gfa1 (glutamine fructose-6-phosphate aminotransferase) is essential for Aspergillus fumigatus growth and virulence. BMC Biology, 23(1), Article 80. https://doi.org/10.1186/s12915-025-02184-0

Puiman, L., Bokelmann, C., Simpson, S. D., Spormann, A. M. & Takors, R. (2025). Dos and don'ts for scaling up gas fermentations. Current Opinion in Biotechnology, 93, Article 103294. https://doi.org/10.1016/j.copbio.2025.103294

Kuhnhäuser, B. G., Bates, C. D., Dransfield, J., Geri, C., Henderson, A., Julia, S., Lim, J. Y., Morley, R. J., Rustiami, H., Schley, R. J., Bellot, S., Chomicki, G., Eiserhardt, W. L., Hiscock, S. J. & Baker, W. J. (2025). Island geography drives evolution of rattan palms in tropical Asian rainforests. Science (New York, N.Y.), 387(6739), 1204-1209. https://doi.org/10.1126/science.adp3437

Moedt, S. M., Christoffersen, K. S., Westergaard-Nielsen, A., Martinsen, K. T., Pastor, A., Korsgaard, N. J. & Riis, T. (2025). Drivers of Epilithic Biofilms in Greenland Streams: The Role of Nutrients, Temperature and Catchment Slope Across a Climate Gradient. Environmental Microbiology Reports, 17(2), Article e70074. https://doi.org/10.1111/1758-2229.70074

Vang, M. Ø., Grombacher, D., Larsen, J. J. & Wilson, S. (2025). Efficient mapping of complex groundwater systems associated with braided rivers using small coil surface nuclear magnetic resonance. Geophysics, 90(3), 1-12. https://doi.org/10.1190/geo2023-0765.1

Nowak, J. S., Olesen, S., Tian, P., Bærentsen, R. L., Brodersen, D. E. & Otzen, D. E. (2025). Role of electrostatics in cold adaptation: A comparative study of eury- and stenopsychrophilic triose phosphate isomerase. Biochimica et Biophysica Acta - Proteins and Proteomics, 1873(4), Article 141072. https://doi.org/10.1016/j.bbapap.2025.141072

Pacheco, J. P., López-Ballesteros, A., Mesman, J. P., Aznarez, C., Pierson, D., Trolle, D., Nielsen, A. & Senent-Aparicio, J. (2025). Coupling SWAT+ and GOTM-WET models to assess agricultural management practices for mitigating harmful algal blooms in Mar Menor, Spain. Journal of Environmental Management, 380, Article 125033. https://doi.org/10.1016/j.jenvman.2025.125033

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