Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Rowan, J., Du, A., Lundgren, E. J., Faith, J. T., Beaudrot, L., Campisano, C. J., Joordens, J. C., Lazagabaster, I. A., Locke, E. M., Smail, I. E., Reed, K. E. & Kamilar, J. M. (2024). Long-term biotic homogenization in the East African Rift System over the last 6 million years of hominin evolution. Nature Ecology and Evolution, 8(9), 1751-1759. https://doi.org/10.1038/s41559-024-02462-0

Rácz, R., Kovács, S. T. S., Lakatos, G., Rahul, K. K., Mifsud, D. V., Herczku, P., Sulik, B., Juhász, Z., Perduk, Z., Ioppolo, S., Mason, N. J., Field, T. A., Biri, S. & McCullough, R. W. (2024). AQUILA: A laboratory facility for the irradiation of astrochemical ice analogs by keV ions. Review of Scientific Instruments, 95(9), Article 095105. https://doi.org/10.1063/5.0207967

TRACERx Consortium (2024). Representation of genomic intratumor heterogeneity in multi-region non-small cell lung cancer patient-derived xenograft models. Nature Communications, 15(1), Article 4653. https://doi.org/10.1038/s41467-024-47547-3

Olsen, W. P., Courtade, G., Peña-Díaz, S., Nagaraj, M., Sønderby, T. V., Mulder, F. A. A., Malle, M. G. & Otzen, D. E. (2024). CsgA gatekeeper residues control nucleation but not stability of functional amyloid. Protein Science, 33(10), Article e5178. https://doi.org/10.1002/pro.5178

Salomonsen, C., Martyn, A., Quilbé, J., Björgvinsdóttir, Þ. N., Andersen, S. U., Radutoiu, S. & Glasius, M. (2024). Comprehensive characterization of the rhizosphere metabolome: A novel method for non-targeted analysis of Lotus japonicus root exudates. Rhizosphere, 32, Article 100957. https://doi.org/10.1016/j.rhisph.2024.100957

Nie, S. & Skibsted, J. (2024). Aluminum distribution in C-(A)-S-H and calcium aluminate hydrate phases of Portland cement – metakaolin – limestone blends studied by ²⁷Al and ²⁹Si NMR spectroscopy. Cement and Concrete Research, 186, Article 107664. https://doi.org/10.1016/j.cemconres.2024.107664

Caragiannis, I. & Narang, S. (2023). Repeatedly Matching Items to Agents Fairly and Efficiently. In AAMAS '23: Proceedings of the 2023 International Conference on Autonomous Agents and Multiagent Systems (pp. 2670-2672). Association for Computing Machinery.

Caragiannis, I., Garg, J., Rathi, N., Sharma, E. & Varricchio, G. (2023). New Fairness Concepts for Allocating Indivisible Items. In E. Elkind (Ed.), IJCAI '23: Proceedings of the Thirty-Second International Joint Conference on Artificial Intelligence (pp. 2554-2562). Article 284 Association for Computing Machinery. https://doi.org/10.24963/ijcai.2023/284

Caragiannis, I. & Rathi, N. (2023). Optimizing over Serial Dictatorships. In A. Deligkas & A. Filos-Ratsikas (Eds.), Algorithmic Game Theory: 16th International Symposium, SAGT 2023, Egham, UK, September 4–7, 2023, Proceedings (pp. 329-346). Springer. https://doi.org/10.1007/978-3-031-43254-5_19

Caragiannis, I. & Narang, S. (2023). Repeatedly Matching Items to Agents Fairly and Efficiently. In A. Deligkas & A. Filos-Ratsikas (Eds.), Algorithmic Game Theory: 16th International Symposium, SAGT 2023, Egham, UK, September 4–7, 2023, Proceedings (pp. 347-364). Springer. https://doi.org/10.1007/978-3-031-43254-5_20

Abdrabou, Y., Asbeck, M., Pfeuffer, K., Abdelrahman, Y., Hassib, M. & Alt, F. (2024). Empowering Users: Leveraging Interface Cues to Enhance Password Security. https://link.springer.com/chapter/10.1007/978-3-031-42280-5_22

Abdrabou, Y., Hassib, M., Hu, S., Pfeuffer, K., Khamis, M., Bulling, A. & Alt, F. (2024). EyeSeeIdentity: Exploring Natural Gaze Behavior for Implicit User Identification during Photo Viewing.

Ko, D., Kim, Y., Zhu, J., Wessely, M. & Mueller, S. (2023). FlexBoard: A Flexible Breadboard for Interaction Prototyping on Curved and Deformable Surfaces. In CHI '23: Proceedings of the 2023 CHI Conference on Human Factors in Computing Systems Article 733 Association for Computing Machinery. https://doi.org/10.1145/3544548.3580748

Ko, D., Kim, Y., Zhu, J., Wessely, M. & Mueller, S. (2023). Demonstration of FlexBoard: A Flexible Breadboard Platform for Interaction Prototyping on Curved and Deformable Objects. In CHI EA '23: Extended Abstracts of the 2023 CHI Conference on Human Factors in Computing Systems Article 444 Association for Computing Machinery. https://doi.org/10.1145/3544549.3583915

Larsen, K. G. & Yu, H. (2023). Super-Logarithmic Lower Bounds for Dynamic Graph Problems. In 2023 IEEE 64th Annual Symposium on Foundations of Computer Science (FOCS) (pp. 1589-1604). IEEE. https://doi.org/10.1109/FOCS57990.2023.00096

Bucarelli, M. S., Larsen, M. F., Schwiegelshohn, C. & Toftrup, M. B. (2023). On Generalization Bounds for Projective Clustering. In Advances in Neural Information Processing Systems https://papers.nips.cc/paper_files/paper/2023/hash/e30bf4765ae6b16a87fb4d7b0b3b3dec-Abstract-Conference.html

Grandoni, F., Schwiegelshohn, C., Solomon, S. & Uzrad, A. (2022). Maintaining an EDCS in General Graphs: Simpler, Density-Sensitive and with Worst-Case Time Bounds. In Symposium on Simplicity in Algorithms (SOSA) (pp. 12-23). Society for Industrial and Applied Mathematics Publications. https://doi.org/10.1137/1.9781611977066.2

Afshani, P. & Schwiegelshohn, C. (2024). Optimal Coresets for Low-Dimensional Geometric Median. In International Conference on Machine Learning (pp. 262-270). PMLR.

Høgsgaard, M. M., Kamma, L., Larsen, K. G., Nelson, J. & Schwiegelshohn, C. (2024). Sparse Dimensionality Reduction Revisited. In International Conference on Machine Learning (pp. 18454-18469). PMLR.

Canetti, R., Kolby, S., Ravi, D., Soria Vazquez, E. & Yakoubov, S. (2023). Taming Adaptivity in YOSO Protocols: The Modular Way. In G. Rothblum & H. Wee (Eds.), Theory of Cryptography: 21st International Conference, TCC 2023, Taipei, Taiwan, November 29 – December 2, 2023, Proceedings, Part II (Vol. 2, pp. 33-62). Springer. https://doi.org/10.1007/978-3-031-48618-0_2

Baum, C., David, B., Dowsley, R., Kishore, R., Nielsen, J. B. & Oechsner, S. (2023). CRAFT: Composable Randomness Beacons and Output-Independent Abort MPC From Time. In A. Boldyreva & V. Kolesnikov (Eds.), Public-Key Cryptography – PKC 2023: 26th IACR International Conference on Practice and Theory of Public-Key Cryptography, Atlanta, GA, USA, May 7–10, 2023, Proceedings, Part I (Vol. 1, pp. 439-470). Springer Science+Business Media. https://doi.org/10.1007/978-3-031-31368-4_16

Koutra, D., Mottin, D. & Zhu, J. (2023). Fact summarization for personalized knowledge graphs. In Personal Knowledge Graphs (PKGs): Methodology, tools and applications (pp. 239-254). Institution of Engineering and Technology. https://doi.org/10.1049/PBPC063E_ch10

Heidarizadeh, M., Noorbakhsh, A., Razmjou, A. & Sutherland, D. S. (2024). Silk Fibroin Fibers with In Situ Growth of ZIF-67 Nanoparticles for Membranes with Highly Efficient Nanofluidic Ion Transport. ACS Applied Nano Materials, 7(16), 19481-19492. https://doi.org/10.1021/acsanm.4c03394

Norn, M. T., Priego, L. P., Ramos-Vielba, I., Ryan, T. K., Conradsen, M. L., Durcan, T. M., Hulcoop, D. G., Edwards, A. & Müller, S. (2024). Archetypes of Open Science Partnerships: connecting aims and means in open biomedical research collaborations. Humanities and social sciences communications, 11(1), Article 1184. https://doi.org/10.1057/s41599-024-03682-2

Campanelli, M., Gennaro, R., Melissaris, K. G. & Nizzardo, L. (2024). Witness-Authenticated Key Exchange, Revisited: Extensions to Groups, Improved Models, Simpler Constructions. In F. Baldimtsi & C. Cachin (Eds.), Financial Cryptography and Data Security - 27th International Conference, FC 2023, Revised Selected Papers: 27th International Conference, FC 2023, Bol, Brač, Croatia, May 1–5, 2023, Revised Selected Papers, Part I (1 ed., Vol. 13950, pp. 112-128). Article 7 Springer, Cham. https://doi.org/10.1007/978-3-031-47754-6_7

Ejrnæs, D. D., Olivier, B., Bakker, E. S., Cornelissen, P., Ejrnæs, R., Smit, C. & Svenning, J. C. (2024). Vegetation dynamics following three decades of trophic rewilding in the mesic grasslands of Oostvaardersplassen. Applied Vegetation Science, 27(3), Article e12805. https://doi.org/10.1111/avsc.12805

Pedersen, J. M., Blatchley Hansen, A. & Halbe Torres, M. (2023). Winning the European Cyber Security Challenge 2022: What did We Learn? In International Symposium on Project Approaches in Engineering Education (Vol. 13, pp. 148-157) http://paee.dps.uminho.pt/proceedingsSCOPUS/PAEE_ALE_2023_PROCEEDINGS.pdf

Farkhondeh Tale Navi, F., Heysieattalab, S., Raoufy, M. R., Sabaghypour, S., Nazari, M. & Nazari, M. A. (2024). Adaptive closed-loop modulation of cortical theta oscillations: Insights into the neural dynamics of navigational decision-making. Brain Stimulation, 17(5), 1101-1118. https://doi.org/10.1016/j.brs.2024.09.005

Dybdahl, A. K., Holmboe, C. M. H., Baattrup-Pedersen, A., Riis, T. & Pastor, A. (2024). Temperature dependence of biofilm metabolism in a lowland stream. Freshwater Science, 43(3), 277-287. https://doi.org/10.1086/731873

Besana, N., Krogh, P. G., Petersen, M. G. & Spallazzo, D. (2024). Expanding the Concept of Sustainable Interaction Design: A Systematic Review. Sustainability (Switzerland), 16(17), Article 7486. https://doi.org/10.3390/su16177486

Orell-Miquel, J., Murgas, F., Pallé, E., Mallorquín, M., López-Puertas, M., Lampón, M., Sanz-Forcada, J., Nortmann, L., Czesla, S., Nagel, E., Ribas, I., Stangret, M., Livingston, J., Knudstrup, E., Albrecht, S. H., Carleo, I., Caballero, J. A., Dai, F., Esparza-Borges, E. ... Vico Linares, J. I. (2024). The MOPYS project: A survey of 70 planets in search of extended He I and H atmospheres No evidence of enhanced evaporation in young planets. Astronomy and Astrophysics, 689, Article A179. https://doi.org/10.1051/0004-6361/202449411

Schrøder, T. S. O., Gonçalves, F., Vollstädt, M. G. R., Zhang, T., Jensen, R. D., Tarazona-Tubens, F. L., Kim, S., Galetti, M., Simmons, B. I., Kaiser-Bunbury, C. N., Temeles, E. J. & Dalsgaard, B. (2024). Hurricane-induced pollinator shifts in a tightly coadapted plant–hummingbird mutualism. New Phytologist, 244(1), 16-20. https://doi.org/10.1111/nph.19938

Adetsu, D. V., Koganti, T., Petersen, R. J., Pedersen, J. B., Zak, D., Greve, M. H. & Beucher, A. (2024). Sensor-based peat thickness mapping of a cultivated bog in Denmark. Geoderma, 452, Article 117091. https://doi.org/10.1016/j.geoderma.2024.117091

Zhu, Y., Yang, Y., Wu, S., Zhu, Y., Li, X., Mao, Q., Chen, Y., Shi, R., Zhong, J. & Wang, J. (2024). Hydrofluoric Acid-Free Broadband Near-Infrared Phosphors K₂LiMF₆:Cr³⁺ with Zero-Thermal Quenching: Structure, Luminescence, and Application. ACS Applied Materials and Interfaces, 16(36), 47912-47922. https://doi.org/10.1021/acsami.4c09500

Kangas, T., Kuncarayakti, H., Nagao, T., Kotak, R., Kankare, E., Fraser, M., Stevance, H., Mattila, S., Maeda, K., Stritzinger, M., Lundqvist, P., Elias-Rosa, N., Ferrari, L., Folatelli, G., Frohmaier, C., Galbany, L., Kawabata, M., Koutsiona, E., Müller-Bravo, T. E. ... Reguitti, A. (2024). The enigmatic double-peaked stripped-envelope SN 2023aew. Astronomy and Astrophysics, 689, Article A182. https://doi.org/10.1051/0004-6361/202449420

Dainotti, M. G., De Simone, B., Mohideen Malik, R. F., Pasumarti, V., Levine, D., Saha, N., Gendre, B., Kido, D., Watson, A. M., Becerra, R. L., Belkin, S., Desai, S., do Pedreira, A. C. C. E. S., Das, U., Li, L., Oates, S. R., Cenko, S. B., Pozanenko, A., Volnova, A. ... Jamal, W. (2024). An optical gamma-ray burst catalogue with measured redshift – I. Data release of 535 gamma-ray bursts and colour evolution. Monthly Notices of the Royal Astronomical Society, 533(4), 4023-4043. https://doi.org/10.1093/mnras/stae1484

Dilamian, M., Montazer, M., Yousefi, H., Otzen, D. E. & Morshedi, D. (2024). Functional porous protein nanofibrils/polysaccharides aerogel beads for efficient dyes removal from water. Materials Advances, 5(18), 7199-7221. https://doi.org/10.1039/d4ma00380b

IDS Collaboration (2024). Charge radii of thallium isotopes near the N=126 shell closure. Physical Review C, 110(3), Article 034315. https://doi.org/10.1103/PhysRevC.110.034315

Cagliari, M. S., Granett, B. R., Guzzo, L., Bethermin, M., Bolzonella, M., de la Torre, S., Monaco, P., Moresco, M., Percival, W. J., Scarlata, C., Wang, Y., Ezziati, M., Ilbert, O., Le Brun, V., Amara, A., Andreon, S., Auricchio, N., Baldi, M., Bardelli, S. ... Bisigello, L. (2024). Euclid: Testing photometric selection of emission-line galaxy targets. Astronomy and Astrophysics, 689, Article A166. https://doi.org/10.1051/0004-6361/202449970

Gao, Y., Zhao, B., Saintilan, N., Chen, J., Wu, W., Wen, L., Zhao, F., Zhang, T., Geng, Z., Yang, G., Song, C. & Zhuang, P. (2024). Rooting meta-ecosystems with reciprocal lateral carbon and nitrogen flows in a Yangtze coastal marsh. Environmental Research Letters, 19(10), Article 104056. https://doi.org/10.1088/1748-9326/ad73ea

Huang, Y., Xu, H., Wang, Y., Xing, Z., Fang, R., Lai, H., Qian, M., Dong, M., Carraro, M., Skrydstrup, T., Daasbjerg, K. & Xin, Z. (2024). Hierarchical Superhydrophilic/Superaerophobic Ni₃S₂/VS₂ Nanorod-Based Bifunctional Electrocatalyst Supported on Nickel Foam for Overall Urea Electrolysis. Inorganic Chemistry, 63(40), 19002-19010. https://doi.org/10.1021/acs.inorgchem.4c03400

Hwang, C., Feuchtner, T., Oakley, I. & Grønbæk, K. (2024). Enriching Industrial Training Experience in Virtual Reality with Pseudo-Haptics and Vibrotactile Stimulation. 1-11. Paper presented at The 30th ACM Symposium on Virtual Reality Software and Technology. https://doi.org/10.1145/3641825.3687728

Dodd, R. J., Blundell, C. D., Sattelle, B. M., Enghild, J. J., Milner, C. M. & Day, A. J. (2024). Chemical modification of hyaluronan oligosaccharides differentially modulates hyaluronan–hyaladherin interactions. The Journal of Biological Chemistry, 300(9), Article 107668. https://doi.org/10.1016/j.jbc.2024.107668

Fage-Butler, A., Ledderer, L. & Nielsen, K. H. (2025). Introduction. In Science Communication and Trust (pp. 1-21). Springer. https://doi.org/10.1007/978-981-96-1289-5_1

Fage-Butler, A., Nielsen, K. H. & Ledderer, L. K. (2025). Conclusion. In Science communication and trust (pp. 493-509). Palgrave Macmillan. https://doi.org/10.1007/978-981-96-1289-5_24

Hoyningen-Huene, P. & Wray, K. B. (2025). Discussion Note on Hasok Chang: Realism for Realistic People. Journal for General Philosophy of Science, 56(2), 275-286. https://doi.org/10.1007/s10838-024-09704-6

Terenzi, L., Gao, Z., Ravandeh, M., Fedele, C., Klausen, L. H., Bovio, C. L., Priimagi, A. & Santoro, F. (2024). Engineering Lipid-Based Pop-up Conductive Interfaces with PEDOT:PSS and Light-Responsive Azopolymer Films. Advanced Healthcare Materials, 13(24), Article 2303812. https://doi.org/10.1002/adhm.202303812

Nooteboom, S. W., Okholm, K. R., Lamberti, V., Oomen, B., Sutherland, D. S. & Zijlstra, P. (2024). Rate-Engineered Plasmon-Enhanced Fluorescence for Real-Time Microsecond Dynamics of Single Biomolecules. Nano Letters, 24(37), 11641-11647. https://doi.org/10.1021/acs.nanolett.4c03220

Tiepner, A. & Trottner, L. (2024). Multivariate change estimation for a stochastic heat equation from local measurements.

Camacho-Guardian, A., Bruun, G. & Paredes, R. (2024). Interactions mediated by atoms, photons, electrons, and excitons. Physical Review A, 110(3), Article 030101. https://doi.org/10.1103/PhysRevA.110.030101

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Anne Kirstine Mehlsen