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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kolind, K., Dolatshahi-Pirouz, A., Lovmand, J., Pedersen, F. S., Foss, M. & Besenbacher, F. (2010). A combinatorial screening of human fibroblast responses on micro-structured surfaces. Biomaterials, 31(35), 9182.

Penner, R. & Andersen, J. E. (2009). Algebro-geometric abstractions of molecular structures. (Patent No. PA 2009 70162).

Dolatshahi-Pirouz, A., Kolman, N. B., Arpanaei, A., Foss, M., Chevallier, J., Kingshott, P., Baas, J., Søballe, K. & Besenbacher, F. (2011). The adsorption characteristics of osteopontin on hydroxyapatite and gold. Materials Science and Engineering C, 31(3), 514-522. https://doi.org/10.1016/j.msec.2010.10.011

Ludvigsen, M., Fogtmann, M. H. & Grønbæk, K. (2010). TacTowers: An Interactive Training Equipment for Elite. In O. W. Bertelsen, P. G. Krogh, K. Halskov & M. G. Petersen (Eds.), Proceedings of the 8th ACM Conference on Designing Interactive Systems (pp. 412-415). Association for Computing Machinery. https://doi.org/10.1145/1858171.1858250

Kaporis, A., Papadopoulos, A., Sioutas, S., Tsakalidis, K. & Tsichlas, K. (2010). Efficient processing of 3-sided range queries with probabilistic guarantees. In Proceedings of the 13th International Conference on Database Theory (pp. 34-43). Association for Computing Machinery. https://doi.org/10.1145/1804669.1804676

Zhang, M., Kristensen, M., Malureanu, R. & Krüger, A. C. (2010). 1x3 Beam Splitter Based on Self-Imaging Phenomena in Air-Slab Photonic Crystal Waveguides. Poster session presented at European Conference on Integrated Optics, Cambridge, United Kingdom.

Jakobsen, S. S., Baas, J., Jakobsen, T. & Søballe, K. (2010). Biomechanical implant fixation of CoCrMo coating inferior to titanium coating in a canine implant model. Journal of Biomedical Materials Research. Part A, 94(1), 180-6. https://doi.org/10.1002/jbm.a.32709

Cvitanich, C., Przybyłowicz, W. J., Mesjasz-Przybyłowicz, J., Blair, M. W., Astudillo, C., Orlowska, E. Z., Jurkiewicz, A. M., Jensen, E. Ø. & Stougaard, J. (2011). Micro-PIXE investigation of bean seeds to assist micronutrient biofortification. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms.

Yatime, L., Mechulam, Y., Blanquet, S. & Schmitt, E. (2007). Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states. Proceedings of the National Academy of Sciences (PNAS), 104(47), 18445-50. https://doi.org/10.1073/pnas.0706784104

Mechulam, Y., Guillon, L., Yatime, L., Blanquet, S. & Schmitt, E. (2007). Protection-based assays to measure aminoacyl-tRNA binding to translation initiation factors. Methods in Enzymology, 430, 265-81. https://doi.org/10.1016/S0076-6879(07)30011-6

Yatime, L., Mechulam, Y., Blanquet, S. & Schmitt, E. (2006). Structural switch of the gamma subunit in an archaeal aIF2 alpha gamma heterodimer. Structure, 14(1), 119-28. https://doi.org/10.1016/j.str.2005.09.020

Yatime, L., Schmitt, E., Blanquet, S. & Mechulam, Y. (2004). Functional molecular mapping of archaeal translation initiation factor 2. Journal of Biological Chemistry, 279(16), 15984-93. https://doi.org/10.1074/jbc.M311561200

Yatime, L., Schmitt, E., Blanquet, S. & Mechulam, Y. (2005). Structure-function relationships of the intact aIF2alpha subunit from the archaeon Pyrococcus abyssi. Biochemistry, 44(24), 8749-56. https://doi.org/10.1021/bi050373i

Ke, Y., Sharma, J., Liu, M., Jahn, K., Liu, Y. & Yan, H. (2009). Scaffolded DNA Origami of a DNA Tetrahedron Molecular Container. Nano Letters, 6(9), 2445.

Fangio, M. F., Martensen, P. M., Roura, S. I. & Fritz, R. (2010). Antimicrobial activity produced by Bacillus spp. isolated from food of plant origin. Ital. J. Food Sci., 22(3), 337-342.

Singh, R., Kølvraa, S., Bross, P., Jensen, U. B., Gregersen, N., Tan, Q., Knudsen, C. & Rattan, S. I. S. (2006). Reduced heat shock response in human mononuclear cells during aging and its association with polymorphisms in HSP70 genes. Cell Stress & Chaperones, 11(3), 208-215. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1576475/

Vorup-Jensen, T., Sørensen, E. S., Jensen, U. B., Schwaeble, W., Kawasaki, T., Ma, Y., Uemura, K., Wakamiya, N., Suzuki, Y., Jensen, T. G., Takahashi, K., Ezekowitz, R. A., Thiel, S. & Jensenius, J. C. (2001). Recombinant expression of human mannan-binding lectin. International Immunopharmacology, 1(4), 677-87.

Westergaard, M., Henningsen, J., Svendsen, M. L., Johansen, C., Jensen, U. B., Schrøder, H. D., Kratchmarova - Blagoeva, I. H., Berge, R. K., Iversen, L., Bolund, L., Kragballe, K. & Kristiansen, K. (2001). Modulation of keratinocyte gene expression and differentiation by PPAR-selective ligands and tetradecylthioacetic acid. Journal of Investigative Dermatology, 116(5), 702-12. https://doi.org/10.1046/j.0022-202x.2001.doc.x

Vosegaard, T. (2010). Challenges in Numerical Simulations of Solid-State NMR Experiments: Spin Exchange Pulse Sequences. Solid State Nuclear Magnetic Resonance, 38. https://doi.org/10.1016/j.ssnmr.2011.01.002

Alexanderson, H., Murray, A. S. & Johnsen, T. (2010). Re-dating of the Pilgrimstad interstadial with OSL: a warmer climate and a smaller ice sheet during the Swedish Middle Weichselian (MIS 3)? Boreas, 39(2), 367-376. https://doi.org/10.1111/j.1502-3885.2009.00130.x

Andreucci, S., Clemmensen, L., Murray, A. S. & Pascucci, V. (2010). Middle to late Pleistocene coastal deposits of Alghero, northwest Sardinia (Italy): Chronology and evolution. Quaternary International, 222(1-2), 3-16. https://doi.org/10.1016/j.quaint.2009.07.025

Ankjærgaard, C., Murray, A. S., Thomsen, K. J. & Jain, M. (2010). Optimising the separation of quartz and feldspar optically stimulated luminescence using pulsed excitation. Radiation Measurements, 45(7), 778-785. https://doi.org/10.1016/j.radmeas.2010.03.004

Clemmensen, L. & Murray, A. S. (2010). Luminescence dating of Holocene spit deposits: An example from Skagen Odde, Denmark. Boreas, 39(1), 154-162. https://doi.org/10.1111/j.1502-3885.2009.00110.x

Kazerouni, A. M., Friis, H., Svendsen, J. B. & Nielsen, O. B. (2013). The Effect of Burial on Clay Mineral Diagenesis and Quartz Cementation in Mudstones-Examples from the Siri Canyon, Danish North Sea. In A. M. Kazerouni (Ed.), Sandstone: Geochemistry, Uses and Environmental Impact (pp. 271-295). Nova Science Publishers. https://www.novapublishers.com/catalog/product_info.php?products_id=46436&osCsid=70bcec404d58ef17fb06150ef7801db1

Martins, A. A., Cunha, P. P., Rosina, P., Osterbeek, L., Cura, S., Grimaldi, S., Gomes, J., Buylaert, J.-P., Murray, A. S. & Matos, J. (2010). Geoarchaeology of Pleistocene open-air sites in the Vila Nova da Barquinha-Santa Cita area (Lower Tejo River Basin, central Portugal). Proceedings of the Geologists' Association, 121(2), 128-140. https://doi.org/10.1016/j.pgeola.2010.01.005

Moska, P., Murray, A. S. & Bluszcz, A. (2010). Luminescence properties of single grain quartz to determine the history of a sample from the Sahara Desert. Quaternary Geochronology, 5(2-3, Special Issue), 96-101. https://doi.org/10.1016/j.quageo.2009.07.002

Pagonis, V., Ankjærgaard, C., Murray, A. S., Jain, M., Chen, R., Lawless, J. & Greilich, S. (2010). Modelling the thermal quenching mechanism in quartz based on time-resolved optically stimulated luminescence. Journal of Luminescence, 130(5), 902-909. https://doi.org/10.1016/j.jlumin.2009.12.032

Sarala, P., Pihlaja, J., Putkinen, N. & Murray, A. S. (2010). Composition and origin of the Middle Weichselian interstadial deposit in Veskoniemi, northern Finland. Estonian Journal of Earth Sciences, 59(2), 117-124. https://doi.org/10.3176/earth.2010.2.02

Sugisaki, S., Buylaert, J.-P., Murray, A. S., Tsukamoto, S., Nogi, Y., Miura, H., Sakai, S., Iijima, K. & Sakamoto, T. (2010). High resolution OSL dating back to MIS 5e in the central Sea of Okhotsk. Quaternary Geochronology, 5(2-3, special issue), 293-298. https://doi.org/10.1016/j.quageo.2009.01.008

Tsukamoto, S., Murray, A. S., Ankjærgaard, C., Jain, M. & Lapp, T. (2010). Charge recombination processes in minerals studied using optically stimulated luminescence and time-resolved exo-electrons. Journal of Physics D: Applied Physics, 43(32), 325502. https://doi.org/10.1088/0022-3727/43/32/325502

Pilipenko, O. V., Trubikhin, V. M., Abrahamsen, N. & Buylaert, J.-P. (2010). Response of the Paleomagnetic Record to Environmental Changes in the Late Pleistocene. Izvestiya, Physics of the Solid Earth, 46(12), 1052-1063. https://doi.org/10.1134/S1069351310120037

Kazerouni, A. M., Friis, H., Poulsen, M. L. K. & Svendsen, J. B. (2011). Implications of illite/smectite formation and potassium transfer during burial diagenesis in glauconitic sandstones of Siri Canyon, Danish North Sea. Abstract from EUROCLAY2011, Antalya, Turkey.

Remvig, L., Duhn, P., Ullman, S., Arokoski, J., Jurvelin, J., Safi, A., Jensen, F., Farholt, S., Hove, H. & Juul-Kristensen, B. (2010). Skin signs in Ehlers-Danlos syndrome: clinical tests and para-clinical methods. Scandinavian Journal of Rheumatology, 39(6), 511-7. https://doi.org/10.3109/03009741003781977

Clementsen, P. F., Farholt, S., Permin, H., Lange, P., Skov, P. S. & Norn, S. (2000). Chlamydia pneumoniae and chronic obstructive pulmonary disease: bronchial biopsies (PCR and culture) and specific serum antibodies in patients and controls. Inflammation Research, 49 Suppl 1, S37-8.

Wesenberg, J., Kurucz, Z. & Mølmer, K. (2011). Dynamics of the collective modes of an inhomogeneous spin ensemble in a cavity. Physical Review A, 83(2), 023826. https://doi.org/10.1103/PhysRevA.83.023826

Weidle, C., Maupin, V., Ritter, J., Kværna, T., Schweitzer, J., Balling, N., Thybo, H., Faleide, J. I. & Wenzel, F. (2010). MAGNUS —A seismological broadband experiment to resolve crustal and upper mantle structure beneath the Southern Scandes Mountains in Norway. Seismological Research Letters, 81(1), 76-84. https://doi.org/10.1785/gssrl.81.1.76

Jonstrup, A. T., Andersen, K. R., Van, L. B. & Brodersen, D. (2010). Structural and mechanistic insights into the S. pombe Pop2 deadenylase protein. Poster session presented at The modern RNA world, Murnau, Germany.

Lefevre, S., Huong, D. T. T., Wang, T., Phuong, N. T. & Bayley, M. (2011). Hypoxia tolerance and partitioning of bimodal respiration in the striped catfish (Pangasianodon hypophthalmus). Comparative Biochemistry and Physiology - Part A: Molecular & Integrative Physiology, 158(2), 207-214. https://doi.org/10.1016/j.cbpa.2010.10.029

Ferkinghoff-Borg, J., Fonslet, J., Andersen, C. B., Krishna, S., Pigolotti, S., Yagi, H., Goto, Y., Otzen, D. & Jensen, M. H. (2010). Stop-and-go kinetics in amyloid fibrillation. Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, 82(1 Pt 1), 010901.

Lauridsen, C., Vestergaard, E.-M., Højsgaard, S., Jensen, S. K. & Sørensen, M. T. (2011). Inoculation of weaned pigs with E. coli reduces depots of vitamin E. Livestock Science, 137(1-3), 161-167. https://doi.org/10.1016/j.livsci.2010.10.015

Rohde, J. & Toftegaard, T. S. (2011). Adaption of Cognitive Radio technology to low-cost and low-power wireless Personal Area Network devices. Wireless Personal Communications, 58(1), 111-123. https://doi.org/10.1007/s11277-011-0291-x

Kuijpers, G., Nielsen, T. T. & Prasad, R. (2003). Performance Investigation of Extensions to the AODV Routing Protocol. Paper presented at 6th International Symposium on Wireless Personal Multimedia Coomunications. WPMC 2003, Yokosuda, Japan.

Philippsen, B., Olsen, J., Rasmussen, P. & Heinemeier, J. (2011). Reservoir age variations and stable isotope values of bulk sediment in a core from the Limfjord, Denmark. Abstract from AMS-12, Wellington, New Zealand. http://www.gns.cri.nz/ams12/

Jakobsen, T., Baas, J., Bechtold, J. E., Elmengaard, B. & Søballe, K. (2010). The effect of soaking allograft in bisphosphonate: a pilot dose-response study. Clinical Orthopaedics and Related Research, 468(3), 867-74. https://doi.org/10.1007/s11999-009-1099-9

Palima, D., Lindballe, T. B., Kristensen, M. V., Tauro, S., Banas, A., Stapelfeldt, H., Keiding, S. R. & Glückstad, J. (2010). Counter-propagating patterns in the biophotonics workstation: getting more out of light for trapping and manipulation. In Optical Trapping and Optical Micromanipulation VII Article 77620U SPIE - International Society for Optical Engineering. https://doi.org/10.1117/12.860888

Trainor, W. J., Caers, J. K., Mukerji, T., Auken, E. & Knight, R. J. (2008). Assessing the Value of Information of Geophysical Data For Groundwater Management. Abstract from AGU Fall Meeting 2008, San Francisco, United States. http://adsabs.harvard.edu/abs/2008AGUFM.H43J..02T

Lesemann, J., Alsop, G. I. & Piotrowski, J. A. (2010). Incremental subglacial meltwater sediment deposition and deformation associated with repeated ice-bed decoupling: a case study from the Island of Funen, Denmark. Quaternary Science Reviews, 29(23-24), 3212-3229. https://doi.org/10.1016/j.quascirev.2010.06.010

Lesemann, J., Piotrowski, J. A. & Wysota, W. (2010). "Glacial curvilineations": New glacial landforms produced by longitudinal vortices in subglacial meltwater flows. Geomorphology, 120(3-4), 153-161. https://doi.org/10.1016/j.geomorph.2010.03.020

Gibbard, P., Head, M. J., Walker, M., Alloway, B., Beu, A. G., Coltorti, M., Hall, V. M., Jiaqi, L., Knudsen, K. L., van Kolfschoten, K., Litt, T., Marks, L., McManus, J., Partridge, T. C., Piotrowski, J. A., Pillans, B., Rousseau, D.-D., Suc, J.-P., Tesakov, A. S. ... Zazo, C. (2010). Formal ratification of the Quaternary System/Period and the Pleistocene Series/Epoch with a base at 2.588 Ma. Journal of Quaternary Science, 25(2), 96-102. https://doi.org/10.1002/jqs.1338

Swift, D. A., Bateman, M. D., Piotrowski, J. A., Sanderson, D. C. W. & Nienow, P. W. (2010). The influence of subglacial processes on the luminescence of basal sediment. Abstract from 35th Bi-annual conference of the Deutsche Quartärvereinigung DEUQUA e.V. Annual Conference of the INQUA PeriBaltic Working Group, Greifswald, Germany. http://www.deuqua.org/tagungen/greifswald-2010/

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