Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Jensen, K. L., Franke, P. T., Nielsen, L. T., Daasbjerg, K. & Jørgensen, K. A. (2010). Anodic Oxidation and Organocatalysis: Direct Regio- and Stereoselective Access to meta-Substituted Anilines by α-Arylation of Aldehydes. Angewandte Chemie International Edition, 49, 129.

Jensen, K. L., Franke, P. T., Arróniz, C., Kobbelgaard, S. & Jørgensen, K. A. (2010). Enantioselective Synthesis of Cyclopentene Carbaldehydes via a Direct Multicatalytic CascadeSequence - Carbocyclization of Aldehydes with Alkynes. Chemistry: A European Journal, 16, 1750.

Mazier, F., Kuneš, P., Sugita, S., Trondman, A.-K., Broström, A. & Gaillard, M.-J. (2010). Pollen-inferred quantitative reconstructions of Holocene land-cover in NW Europe for the evaluation of past climate-vegetation feedbacks: Evaluation of the REVEALS-based reconstruction using the Czech Quaternary Palynological Database (PALYCZ). Abstract from European Geosciences Union - General Assembly, Vienna, Austria.

Vad, B. S., Thomsen, L. A. H., Bertelsen, K., Franzmann, M., Pedersen, J. M., Nielsen, S. B., Vosegaard, T., Valnickova, Z., Skrydstrup, T., Enghild, J. J., Wimmer, R., Nielsen, N. C. & Otzen, D. (2010). Divorcing folding from function: how acylation affects the membrane-perturbing properties of an antimicrobial peptide. Biochimica et Biophysica Acta - Proteins and Proteomics, 1804(4), 806-20. https://doi.org/10.1016/j.bbapap.2009.12.006

Nielsen, S. B., Wilhelm, K., Vad, B., Schleucher, J., Morozova-Roche, L. A. & Otzen, D. (2010). The interaction of equine lysozyme:oleic acid complexes with lipid membranes suggests a cargo off-loading mechanism. Journal of Molecular Biology, 398(2), 351-61. https://doi.org/10.1016/j.jmb.2010.03.012

Nielsen, S. B. & Otzen, D. E. (2010). Impact of the antimicrobial peptide Novicidin on membrane structure and integrity. Journal of Colloid and Interface Science, 345(2), 248-256. https://doi.org/10.1016/j.jcis.2010.01.065

Riis, T., Baattrup-Pedersen, A. & Kronvang, B. (2010). Seed germination from deposited sediments during high winter flow in riparian areas. Abstract from Riparian buffer strips as a multifunctional management tool in agricultural landscapes, Ballater, United Kingdom.

Sørensen, H. K. (2010). Exploratory experimentation in experimental mathematics: A glimpse at the PSLQ algorithm. In B. Löwe & T. Müller (Eds.), PhiMSAMP. Philosophy of Mathematics: Sociological Aspects and Mathematical Practice (pp. 341-360). College Publications.

Klempt, C., Topic, O., Gebreyesus, G., Scherer, M., Henninger, T., Hyllus, P., Ertmer, W., Santos, L. & Arlt, J. J. (2010). Parametric Amplification of Vacuum Fluctuations in a Spinor Condensate. Physical Review Letters, 104(19), 195303. https://doi.org/10.1103/PhysRevLett.104.195303

Thrysøe, S. A., Oikawa, M., Yuan, C., Eldrup, N., Klaerke, A., Paaske, W. P., Falk, E., Kim, W. Y. & Nygaard, J. V. (2010). Longitudinal distribution of mechanical stresses in carotid plaques of symptomatic patients. Stroke, 41(5), 1041-3. https://doi.org/10.1161/STROKEAHA.109.571588

Gregersen, V. R., Sørensen, K. K., Christensen, O. F., Velander, I., Busch, M. E., Vingborg, R. K. K., Velander, I. H., Lund, M. S. & Bendixen, C. (2010). Identification of QTL for dorso-caudal chronic pleuritis in 12 crossbred porcine families. Journal of Animal Science, 41(5), 509-514. https://doi.org/10.1111/j.1365-2052.2010.02028.x

Leth, H. A., Madsen, L. B. & Mølmer, K. (2010). Monte Carlo wave packet approach to dissociative multiple ionization in diatomic molecules. Physical Review A, 81(5), 053409. https://doi.org/10.1103/PhysRevA.81.053409

Leth, H. A., Madsen, L. B. & Mølmer, K. (2010). Dissociative double ionization of H₂ and D₂: Comparison between experiment and Monte Carlo wave packet calculations. Physical Review A, 81(5), 053410. https://doi.org/10.1103/PhysRevA.81.053410

Kyhn, L. A., Jensen, F. H., Beedholm, K., Tougaard, J., Hansen, M. & Madsen, P. T. (2010). Echolocation in sympatric Peale's dolphins (Lagenorhynchus australis) and Commerson's dolphins (Cephalorhynchus commersonii) producing narrow-bandhigh-frequency clicks. Journal of Experimental Biology, 213, 1940-1949. https://doi.org/10.1242/jeb.042440

Chantis, A. N., Christensen, N. E., Svane, A. & Cardona, M. (2010). Full-zone analysis of relativistic spin splitting at band anticrossings: The case of zinc-blende semiconductors. Physical Review B, 81(20), 205205. https://doi.org/10.1103/PhysRevB.81.205205

Nielsen, K. H. (2010). Fagfællebedømmelse som kommunikation. Videnskab.dk. http://www.videnskab.dk/content/dk/blogs/bag_om_videnskaben/fagfallebedommelse_som_kommunikation

Nielsen, K. H. (2010). Aarhus Universitet: Det århusianske elfenbenstårn. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/aarhus-universitet

Nielsen, K. H. (2010). Rudkøbing Apotek: To store mænds barndomshjem. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/rudkoebing-apotek/main

Nielsen, K. H. (2010). Botanisk Have: Crystal Palace og planterne. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/botanisk-have/main

Nielsen, K. H. (2010). Niels Bohr Institutet: Tre nobelpriser til Blegdamsvej. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/niels-bohr-institutet/main

Nielsen, K. H. (2010). Ole Rømers observatorium: Stjernekiggeriet. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/ole-roemers-observatorium/main

Nielsen, K. H. (2010). Kirurgisk Akademi, Bredgade: Den anatomiske revolution. In 1001 fortællinger om Danmark Kulturarvsstyrelsen. http://www.kulturarv.dk/1001fortaellinger/da_DK/kirurgisk-akademi-bredgade/main

Pyrz, M., Wang, B., Wabl, M. & Pedersen, F. S. (2010). A retroviral mutagenesis screen identifies Cd74 as a common insertion site in murine B-lymphomas and reveals the existence of a novel IFNγ-inducible Cd74 isoform. Molecular Cancer, 9(86).

Penner, R., Knudsen, M., Wiuf, C. H. & Andersen, J. E. (2010). Fatgraph Models of Proteins. Communications on Pure and Applied Mathematics, 63(10), 1249-1297. https://doi.org/10.1002/cpa.20340

Topic, O., Scherer, M., Gebreyesus, G., Henninger, T., Hyllus, P., Klempt, C., Ertmer, W., Santos, L. & Arlt, J. (2010). Resonant amplification of quantum fluctuations in a spinor gas. Laser Physics, 20(5), 1156-1162. https://doi.org/10.1134/S1054660X10090422

Lizzit, S., Zampieri, G., Petaccia, L., Larciprete, R., Lacovig, P., Rienks, E. D. L., Bihlmayer, G., Baraldi, A. & Hofmann, P. (2010). Band dispersion in the deep 1s core levelof graphene. Nature Physics, 6(5), 345-349. https://doi.org/10.1038/NPHYS1615

Kjær, K., Kjeldsen, K., Korsgaard, N., Larsen, N. K., Bjørk, A. & Funder, S. (2010). The quest for the lost picture and surface detection change of the Greenland Ice Sheet. Abstract from Fourth International Conference and Workshop on the Arctic Palaeoclimate and its Extremes (APEX), Höfn, Iceland.

Palmer, D. S., Christensen, A. U., Sørensen, J., Celik, L., Qvist, K. B. & Schiøtt, H. B. (2010). Bovine Chymosin: A Computational Study of Recognition and Binding of Bovine κ-Casein. Biochemistry, 49, 2563–2573. https://doi.org/10.1021/bi902193u

Fernholz, T., Krauter, H., Jensen, K., Sherson, J., Sørensen, A. S. & Polzik, E. S. (2008). Spin Squeezing of Atomic Ensembles via Nuclear-Electronic Spin Entanglement. Physical Review Letters, 101(073601). https://doi.org/10.1103/PhysRevLett.101.073601

Krauter, H., Sherson, J. & Polzik, E. S. (2010). Quantum state transfer between light and matter via teleportation. Laser & Photonics Reviews, 4(6), 685-696. https://doi.org/10.1002/lpor.200900021

Petit, L., Svane, A., Szotek, Z., Temmerman, W. M. & Stocks, G. M. (2010). Self-interaction corrected local spin density calculations of actinides. IOP Conference Series: Materials Science and Engineering, 9(1), 012084. https://doi.org/10.1088/1757-899X/9/1/012084

Sahana, G., Guldbrandtsen, B. & Lund, M. S. (2011). Genome-wide Association Study for Calving Traits in Danish and Swedish Holstein Cattle. Journal of Dairy Science, 94(1), 479-486. https://doi.org/10.3168/jds.2010-3381

Aarhus, R. & Ballegaard, S. A. (2010). Negotiating boundaries: managing disease at home. In E. Mynatt (Ed.), Proceedings of the 28th international conference on human factors in computing systems. CHI '10 (pp. 1223-1232). Association for Computing Machinery. https://doi.org/10.1145/1753326.1753509

Aarhus, R., Gjerlufsen, T., Hohn, T. & Vesterby, M. (2010). Telemedicine for Healthy Patients. In Infrastructure for Health Care: Connecting practices across institutional and professional boundaries (pp. 5-6). University of Copenhagen. http://www.sundhedsit.net/fileadmin/sundhedsitnet/Downloads/Abstracts_Infrastructures09.pdf

Søndergaard, C. S., Hess, D. A., Maxwell, D. J., Weinheimer, C., Rosová, I., Creer, M. H., Piwnica-Worms, D., Kovacs, A., Pedersen, L. & Nolta, J. A. (2010). Human Cord Blood Progenitors with High Aldehyde Dehydrogenase Activity Improve Vascular Density in a Model of Acute Myocardial Infarction. Journal of Translational Medicine, 8, 24.

Brabrand, C. & Thomsen, J. G. (2010). Typed and Unambiguous Pattern Matching on Strings using Regular Expressions. In T. Kutsia, W. Schreiner & M. Fernandez (Eds.), Proceedings of the 12th international ACM SIGPLAN symposium on Principles and practice of declarative programming. PPDP '10: (pp. 243-254). Association for Computing Machinery. https://doi.org/10.1145/1836089.1836120

Lloyd, K., Albert, D., Biddle, J., Chanton, J., Pizarro, O. & Teske, A. (2010). Spatial Structure and Activity of Sedimentary Microbial Communities Underlying a Beggiatoa spp. Mat in a Gulf of Mexico Hydrocarbon Seep. PLoS One, 5(1), 1-13.

Lloyd, K., MacGregor, B. & Teske, A. (2010). Quantitative PCR methods for RNA and DNA in marine sediments: maximizing yield while overcoming inhibition. FEMS Microbiology Ecology, 72(1), 143-151.

Lin, Y.-S., Biddle, J. F., Lipp, J. S., Orcutt, B., Holler, T., Teske, A. & Hinrichs, K.-U. (2010). Effect of storage conditions on archaeal and bacterial communities in subsurface marine sediments. Geomicrobiology Journal, 27, 261-272.

Jensen, S. H., Møller, A. & Thiemann, P. (2010). Interprocedural Analysis with Lazy Propagation. Lecture Notes in Computer Science, 6337, 320-339. https://doi.org/10.1007/978-3-642-15769-1_20

Dong, M. (Ed.) (2009). Materials Special Issue: Nanomaterials. In Mangler titel

Baggesen, J. C. & Madsen, L. B. (2010). Errata: Polarization Effects in Attosecond Photoelectron Spectroscopy. Physical Review Letters, 104(209903(E)). https://doi.org/10.1103/PhysRevLett.104.209903

Klose, K. & Ostermann, K. (2010). Modular Logic Metaprogramming. In W. R. Cook & S. Clarke (Eds.), Proceedings of the ACM international conference on Object oriented programming systems languages and applications. OOPSLA '10 (pp. 484-503). Association for Computing Machinery. https://doi.org/10.1145/1869459.1869499

Eichberg, M., Klose, K., Mitschke, R. & Mezini, M. (2010). Component Composition Using Feature Models. Lecture Notes in Computer Science, 6092, 200-215. https://doi.org/10.1007/978-3-642-13238-4_12

Jensen, K., Kyng, M. & Madsen, O. L. (1979). Delta Semantics Defined By Petri Nets. Aarhus Universitetsforlag.

Jensen, K. & Kyng, M. (1980). Epsilon. A System Description Language. Department of Computer Science, Aarhus University.

Huuse, M., Irving, D., Moreau, J. M., B. Kristensen, T., Andersen, T. R. & Huuse, J. (2010). Seismic Geomorphology of Glaciogenic Structures. Abstract from Frontiers of Seismic Geomorphology, London, United Kingdom. http://www.geolsoc.org.uk/gsl/groups/specialist/petroleum/page7382.html

Jensen, K. (Ed.) (2008). Ninth Workshop and Tutorial on Practical Use of Coloured Petri Nets and the CPN Tools: Aarhus, Denmark, October 20-22, 2008. Department of Computer Science, Aarhus University. Daimi Report Series (DAIMI PB) No. 588

Jensen, K. (Ed.) (2009). Tenth Workshop and Tutorial on Practical Use of Coloured Petri Nets and the CPN Tools: Aarhus, Denmark, October 19-21, 2009. Department of Computer Science, Aarhus University.

Jensen, K. (Ed.) (2007). Eighth Workshop and Tutorial on Practical Use of Coloured Petri Nets and the CPN Tools: Aarhus, Denmark, October 22-24, 2007. Department of Computer Science, Aarhus University. Daimi Report Series (DAIMI PB) No. 584

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