Department of Biology

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 Department of Biology Research Publications

Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Poulsen, H. V., Canibe, N., Finster, K. & Jensen, B. B. (2010). Concentration of volatile sulphur-containing compounds along the gastrointestinal tract of pigs fed a high-sulphur or a low-sulphur diet. Livestock Science, 133(1-3), 128-131. https://doi.org/10.1016/j.livsci.2010.06.043
Mølmer, K. (2010). Rydberg blockade schemes for entanglement of atoms and light. American Physical Society. Bulletin, (5).
Seidler, P., Hansen, M. B., Gyorffy, W., Toffoli, D. & Christiansen, O. (2010). Vibrational absorption spectra calculated from vibrational configuration interaction response theory using the Lanczos method. Journal of Chemical Physics, 132(16), 164105.
Grønbæk, K. & Bødker, S. (1998). Multimedia: Interdisciplinary challenges to design. Scandinavian Journal of Information Systems, 10(1-2). http://iris.cs.aau.dk/tl_files/volumes/volume10/no1/09_boedker_p219-225.pdf
Grønbæk, K., Sloth, L. & Ørbæk, P. (1999). Webvise: Browser and Proxy support for open hypermedia structuring mechanisms on the WWW. Computer Networks, 31(11-16), 1331-1345. https://doi.org/10.1016/S1389-1286(99)00046-8
Grønbæk, K., Nürnberg, P. J., Bucka-Lassen, D., Aagaard Pedersen, C. & Reinert, O. (1999). A component-based open hypermedia approach to integreting structure services. New Review of Hypermedia and Multimedia, 5(1), 179-205. https://doi.org/10.1080/13614569908914713
Grønbæk, K., Reich, S., Wiil, U. K., Nürnberg, P. J., Anderson, K. M., Millard, D. E., Haake, J. M. & Davis, H. C. (1999). Addressing Interoperability in Open Hypermedia: The Design of the Open Hypermedia Protocol. New Review of Hypermedia and Multimedia, 5(1), 207-248. https://doi.org/10.1080/13614569908914714
Grønbæk, K., Bouvin, N. O. & Sloth, L. (2000). Open Hypermedia as User Controlled Meta Data for the Web. Computer Networks, 33(1-6), 553-566. https://doi.org/10.1016/S1389-1286(00)00070-0
Grønbæk, K., Ørbæk, P., Kristensen, J. F. & Eriksen, M. A. (2003). Physical hypermedia: augmenting physical material with hypermedia structures. New Review of Hypermedia and Multimedia, 9(1), 5-34. https://doi.org/10.1080/13614560410001725293
Petersen, M. G. & Grønbæk, K. (2004). Interactive Spaces: Towards Collaborative Structuring and Ubiquitous Presentation in Domestic Environments. Australasian Journal of Information Systems, 11(2), 21-35. http://dl.acs.org.au/index.php/ajis/article/view/122/101
Grønbæk, K. & Kejser, T. (2004). The Gaia Framework: Version Support In Web Based Open Hypermedia. IADIS International Journal on WWW/Internet, 2(1), 17-33.
Brønsted, J. R., Hansen, K. M. & Ingstrup, M. (2010). Service Composition issues in Pervasive Computing. I E E E Pervasive Computing, 9(1), 62-70. https://doi.org/10.1109/MPRV.2010.11
Hansen, B., Kristiansen, S. M. & Christensen, F. D. (2010). Er vejsalt en trussel mod grundvandet?. Abstract from Grundvandskvalitet, ATV Jord- og Grundvandsmøde, Odense, Denmark. http://www.atv-jord-grundvand.dk/Afholdte_moeder/100519moede58/SamletRapport58.pdf
Andersen, J. R., Bak, L., Grarup, S., Lund, K. V., Hansen, K. M. & Torgersen, M. (2005). Design, implementation, and evaluation of the Resilient Smalltalk embedded platform. Computer Languages, Systems and Structures, 31(3-4), 127-141. https://doi.org/10.1016/j.cl.2005.02.003
Kidmose, R. T., Vasiliev, N., Chetverin, A., Knudsen, C. R. & Andersen, G. R. (2010). Structure of the Qβ replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins. Proceedings of the National Academy of Sciences (PNAS), 107(24), 10884-10889.
Grønbæk, K., Hviid, A. & Trigg, R. (1993). ApplBuilder - an Application Generator. In J. L. Knudsen, M. Löfgren, O. L. Madsen & B. Magnusson (Eds.), Object-oriented Software Development Environments - The Mjølner Approach (pp. 570-577). Prentice-Hall.
Nill, B. & Øbro, M. (2010). Q-factorial Gorenstein toric Fano varieties with large Picard number. Tohoku Mathematical Journal, 62(1), 1-15. https://doi.org/10.2748/tmj/1270041023
Bødker, S., Grønbæk, K. & Kyng, M. (1995). Cooperative Design: Techniques and Experiences from the Scandinavian Scene. In R. Baecker, J. Grudin, W. Buxton & S. Greenberg (Eds.), Readings in Human-Computer Interaction: Toward the Year 2000 (pp. 215). Morgan-Kaufmann.
Tøgersen, F. A., Skjøth, F., Munksgaard, L. & Højsgaard, S. (2010). RSSI based indoor tracking in sensor networks using Kalman filters. Computers and Electronics in Agriculture, 72(2), 119-126. https://doi.org/10.1016/j.compag.2010.03.006
Bannon, L. & Grønbæk, K. (1989). Hypermedia: Support for a more natural information organization. Department of Computer Science, Aarhus University.
Bødker, S. & Grønbæk, K. (1989). Cooperative Prototyping Experiments - Users and Designers Envision a Dental Case Record System. Department of Computer Science, Aarhus University.
Grønbæk, K., Hviid, A. & Trigg, R. (1991). ApplBuilder - an Object-Oriented Application Generator Supporting Rapid Prototyping. Department of Computer Science, Aarhus University.
Grønbæk, K., Kyng, M. & Mogensen, P. H. (1992). CSCW Challenges in Large-Scale Technical Projets - a case study. Department of Computer Science, Aarhus University.
Grønbæk, K. & Trigg, R. (1992). Design issues for a Dexter-based hypermedia system. Department of Computer Science, Aarhus University.
Grønbæk, K., Madsen, O. L., Sloth, L. & Hem, J. A. (1993). Designing Dexter-based Cooperative Hypermedia Systems. Department of Computer Science, Aarhus University.
Kahveci, D., Sandnes, K. & Xu, X. (2010). Enzymatic production of omega-3 specialty oils: Emerging process technologies. Poster session presented at AOCS Annual Meeting & Expo, Phoenix, United States.
Andersen, T. L., Kristensen, S., Nielsen, B. W. & Grønbæk, K. (2004). Designing Augmented Reality Board Games: The BattleBoard 3D experience. In Proceedings of the 2nd annual OZCHI conference University of Wollongong, Australia. http://www.ozchi.org/proceedings/2004/pdfs/ozchi2004-132.pdf
Michelow, I. C., Dong, M., Mungall, B. A., Yantosca, L. M., Lear, C., Ji, X., Karpel, M., Rootes, C. L., Brudner, M., Houen, G., Eisen, D. P., Kinane, T. B., Takahashi, K., Stahl, G. L., Olinger, G. G., Spear, G. T., Ezekowitz, R. A. B. & Schmidt, E. V. (2010). A novel L-ficolin/mannose-binding lectin chimeric molecule with enhanced activity against Ebola virus. Journal of Biological Chemistry. https://doi.org/10.1074/jbc.M110.106260
Dong, M., Husale, S. & Sahin, O. (2009). Determination of protein structural flexibility by microsecond force spectroscopy. Nature Nanotechnology, 4(8), 514-7. https://doi.org/10.1038/nnano.2009.156
Nevo, I., Kapishnikov, S., Birman, A., Dong, M., Cohen, S. R., Kjaer, K., Besenbacher, F., Stapelfeldt, H., Seideman, T. & Leiserowitz, L. (2009). Laser-induced aligned self-assembly on water surfaces. Journal of Chemical Physics, 130(14), 144704. https://doi.org/10.1063/1.3108540
Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Subramani, R., Mamdouh, W., Golas, M. M., Sander, B., Stark, H., Oliveira, C. L. P., Pedersen, J. S., Birkedal, V., Besenbacher, F., Gothelf, K. V. & Kjems, J. (2009). Self-assembly of a nanoscale DNA box with a controllable lid. Nature, 459(7243), 73-6. https://doi.org/10.1038/nature07971
Malmos, K., Dong, M., Pillai, S., Kingshott, P., Besenbacher, F., Pedersen, S. U. & Daasbjerg, K. (2009). Using a hydrazone-protected benzenediazonium salt to introduce a near-monolayer of benzaldehyde on glassy carbon surfaces. Journal of the American Chemical Society, 131(13), 4928-36. https://doi.org/10.1021/ja809816x
Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Lind-Thomsen, A., Mamdouh, W., Gothelf, K. V., Besenbacher, F. & Kjems, J. (2008). DNA origami design of dolphin-shaped structures with flexible tails. A C S Nano, 2(6), 1213-8. https://doi.org/10.1021/nn800215j
Yan, K., Xue, Q., Xia, D., Chen, H., Xie, J. & Dong, M. (2009). The core/shell composite nanowires produced by self-scrolling carbon nanotubes onto copper nanowires. A C S Nano, 3(8), 2235-40. https://doi.org/10.1021/nn9005818
Mamdouh, W., Kelly, R. E. A., Dong, M., Kantorovich, L. N. & Besenbacher, F. (2007). Two-dimensional supramolecular nanopatterns formed by the coadsorption of guanine and uracil at the liquid/solid interface. Journal of the American Chemical Society, 130(2), 695-702. https://doi.org/10.1021/ja076832f
Dong, M., Xu, S., Oliveira, C. L. P., Pedersen, J. S., Thiel, S., Besenbacher, F. & Vorup-Jensen, T. (2007). Conformational changes in mannan-binding lectin bound to ligand surfaces. Journal of Immunology, 178(5), 3016-22.
Xu, W., Dong, M., Gersen, H., Rauls, E., Vázquez-Campos, S., Crego-Calama, M., Reinhoudt, D. N., Stensgaard, I., Laegsgaard, E., Linderoth, T. R. & Besenbacher, F. (2007). Cyanuric acid and melamine on Au111: structure and energetics of hydrogen-bonded networks. Small, 3(5), 854-8. https://doi.org/10.1002/smll.200600407
Howard, K. A., Dong, M., Oupicky, D., Bisht, H. S., Buss, C., Besenbacher, F. & Kjems, J. (2007). Nanocarrier stimuli-activated gene delivery. Small, 3(1), 54-7. https://doi.org/10.1002/smll.200600328
Mamdouh, W., Dong, M., Xu, S., Rauls, E. & Besenbacher, F. (2006). Supramolecular nanopatterns self-assembled by adenine-thymine quartets at the liquid/solid interface. Journal of the American Chemical Society, 128(40), 13305-11. https://doi.org/10.1021/ja064988u
Li, Y., Li, Y., Yao, Y., Liu, B., Chen, M., Song, X. & Dong, M. (2009). Two-dimensional scaffold layer formations on a solid surface through xanthan polysaccharide: temperature effect. Colloids and Surfaces B: Biointerfaces, 74(1), 136-9. https://doi.org/10.1016/j.colsurfb.2009.07.007
Pallesen, J., Dong, M., Besenbacher, F. & Kjems, J. (2009). Structure of the HIV-1 Rev response element alone and in complex with regulator of virion (Rev) studied by atomic force microscopy. FEBS journal, 276(15), 4223-32. https://doi.org/10.1111/j.1742-4658.2009.07130.x
Xu, W., Dong, M., Gersen, H., Rauls, E., Vázquez-Campos, S., Crego-Calama, M., Reinhoudt, D. N., Laegsgaard, E., Stensgaard, I., Linderoth, T. R. & Besenbacher, F. (2008). Influence of alkyl side chains on hydrogen-bonded molecular surface nanostructures. Small, 4(10), 1620-3. https://doi.org/10.1002/smll.200800377
Rahbek, U. L., Howard, K. A., Oupicky, D., Manickam, D. S., Dong, M., Nielsen, A. F., Hansen, T. B., Besenbacher, F. & Kjems, J. (2008). Intracellular siRNA and precursor miRNA trafficking using bioresponsive copolypeptides. Journal of Gene Medicine, 10(1), 81-93. https://doi.org/10.1002/jgm.1120
Mamdouh, W., Dong, M., Kelly, R. E. A., Kantorovich, L. N. & Besenbacher, F. (2007). Coexistence of homochiral and heterochiral adenine domains at the liquid/solid interface. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 111(42), 12048-52. https://doi.org/10.1021/jp076623h
Vázquez-Campos, S., Péter, M., Dong, M., Xu, S., Xu, W., Gersen, H., Linderoth, T. R., Schönherr, H., Besenbacher, F., Crego-Calama, M. & Reinhoudt, D. N. (2007). Self-organization of gold-containing hydrogen-bonded rosette assemblies on graphite surface. Langmuir, 23(20), 10294-8. https://doi.org/10.1021/la701330v
Xu, W., Dong, M., Vázquez-Campos, S., Gersen, H., Laegsgaard, E., Stensgaard, I., Crego-Calama, M., Reinhoudt, D. N., Linderoth, T. R. & Besenbacher, F. (2007). Enhanced stability of large molecules vacuum-sublimated onto Au(111) achieved by incorporation of coordinated Au-atoms. Journal of the American Chemical Society, 129(35), 10624-5. https://doi.org/10.1021/ja0725448
Hovgaard, M. B., Dong, M., Otzen, D. E. & Besenbacher, F. (2007). Quartz crystal microbalance studies of multilayer glucagon fibrillation at the solid-liquid interface. Biophysical Journal, 93(6), 2162-9. https://doi.org/10.1529/biophysj.107.109686
Xu, S., Dong, M., Liu, X., Howard, K. A., Kjems, J. & Besenbacher, F. (2007). Direct force measurements between siRNA and chitosan molecules using force spectroscopy. Biophysical Journal, 93(3), 952-9. https://doi.org/10.1529/biophysj.106.093229
Dong, M. D., Hovgaard, M. B., Mamdouh, W., Xu, S. L., Otzen, D. E. & Besenbacher, F. (2008). AFM-based force spectroscopy measurements of mature amyloid fibrils of the peptide glucagon: Nanotechnology. Nanotechnology, 19(38).
Dong, M. D., Howard, K. A., Oupicky, D., Bisht, H., Kjems, J. & Besenbacher, F. (2007). Visualization of thermally activated nanocarriers using in situ atomic force microscopy: Nanotechnology. Nanotechnology, 18(18), Article 185501. https://doi.org/10.1088/0957-4484/18/18/185501

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Anne Kirstine Mehlsen