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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Vanwetswinkel, S., Kriek, J., Andersen, G. R., Guntert, P., Dijk, J., Canters, G. W. & Siegal, G. (2003). Solution structure of the 162 residue C-terminal domain of human elongation factor 1Bgamma. Journal of Biological Chemistry, 278, 43443-43451.
Vanzi, F., Vladimirov, S., Knudsen, C. R., Goldman, Y. E. & B.S., C. (2003). Protein synthesis by single ribosomes. RNA, 9, 1174-1179.
Verbeke, P., Fonager, J., Clark, B. F. C. & Rattan, S. (2001). Heat shock response and ageing: mechanisms and applications. Cell Biology International, 25, 845-857.
Verbeke, P., Siboska, G. E., Clark, B. F. C. & Rattan, S. (2000). Kinetin inhibits protein oxidation and glycoxidation in vitro. Biochem. Biophys. Res. Commun., 276, 1265-1270.
Verhoef, K., Bilodeau, P. S., nullWamelJ.L.B., V., Kjems, J., Stoltzfus, C. M. & Berkhout, B. (2001). Repair of a Rev-minus HIV-1 mutant by activation of a cryptic splice site. J. Virol., 75, 3495-3500.
Villavicencio, E. H., Yoon, J. W., Frank, D. J., Füchtbauer, E.-M., Walterhouse, D. O. & Iannaccone, P. M. (2002). Cooperative e-box regulation of human GLI1 by TWIST and USF. Genesis: The Journal of Genetics and Development, 32, 247-258. http://www.interscience.wiley.com
Vogensen, S. B., Jensen, H. S., Stensbøl, T. B., Frydenvang, K., Bang-Andersen, B., Johansen, T. N., Jensen, J. E. & Krogsgaard-Larsen, P. (2000). Resolution, configurational assignment and enantiopharmacology of 2-amino-3-[3-hydroxy-5-(2-methyl-2H-tetrazol-5-yl)isoxazol-4-]propionic acid, a potent GluR3 and GluR4 preferring AMPA receptor agonist. Chirality, 12, 705-713.
Vosegaard, T., Florian, P., Grandinetti, P. J. & Massiot, D. (2000). Pure absorption-mode spectra using a modulated RF mixing period in MQMAS experiments. Journal of Magnetic Resonance, 143, 217-222.
Vosegaard, T., Florian, P., Massiot, M. & Grandinetti, P. H. (2001). Multiple-quantum magic-angle spinning using rotary resonance excitation. Journal of Chemical Physics, 114, 4618-4624.
Vosegaard, T., Massiot, D. & Grandinetti, P. J. (2000). Sensitivity enhancements in MQ-MAS NMR of spin-5/2 nuclei using modulated RF mixing pulses. Chemical Physics Letters, 326, 454-460.
Westergaard, U. B., Andersen, M. H., Heegaard, C. W., Fedosov, S. N. & Petersen, T. E. (2003). Tetranectin binds hepatocyt growth factor and tissue-type plasminogen activator. FEBS journal, 270, 1850-1854.
Wiles, M. V., Vauti, F., Otte, J., Füchtbauer, E.-M., Ruiz, P., Füchtbauer, A., Arnold, H.-H., Lehrach, H., Metz, T., von Melchner, H. & Wurst, W. (1999). Establishment of a gene trap sequence tag (GTST) library to generate mutant mice from embryonic stem (ES) cells. Nature Genetics, 24, 13-14.
Wogensen, L., Nielsen, C. B., Hjorth, J. P., Rasmussen, L. M., Nielsen, A. H., Gross, K., Sarvetnick, N. & Ledet, T. (1999). Under control of the Ren-1c promoter, locally produced TGF-ss1 indiced accumulation of glomerular extracellular matrix in transgenic mice. Diabetes, 48, 182-192.
Wopereis, J., Pajuelo, E., Dazzo, F. B., Jiang, Q., Gresshoff, P. M., de Bruijn, F. J., Stougaard, J. & Szczyglowski, K. (2000). Short root mutant of Lotus japonicus with a dramatically altered symbiotic phenotype. Plant. J., 23, 97-114.
Wyszko, E., Barciszewska, M. Z., Markiewicz, M., Szymanski, M., Markiewicz, W. T., Clark, B. F. C. & Barciszewski, J. (2003). ″Action-at-a distance″ of a new DNA oxidative damage product 6-furfuryl-adenine (kinetin) on template properties of modified DNA. Biochim. Biophys. Acta., 165, 239-245.
Zaugg, P., Djonov, V., Füchtbauer, E.-M. & Draeger, A. (1999). Sorting of murine vascular smooth muscle cells during wound healing in chicken chorioallantoic membrane. Experimental Cell Research, 253, 599-606.
Zahler, A. M., Damgaard, C. K., Kjems, J. & Caputi, M. (2004). SC35 and hnRNPs A/B binding to a juxtaposed ESE/ESS element regulates HIV-1 tat exon 2 splicing. Journal of Biological Chemistry, 279, 10077-10084.
van der Holst, P. P. G., Grønlund, M., Stougaard, J. & Spaink, H. P. (2003). Proceedings from Molecular Plant-Microbe Interactions: Symbiosis and defence: two sides of one coin. Paper presented at 11th International Congress.
Andersen, E. Ø., Øllgaard, B., Harling, G. (Ed.) & Andersson, L. (Ed.) (2001). 10. Gleicheniaceae. In Flora of Ecuador (66 ed., pp. 107-171)
Andersen, J. B., Rourke, B. C., Caiozzo, V. J., Bennett, A. F., Hicks, J. W., Nyengaard, J. R. & Wang, T. (2005). Postprandial ventricular growth in the Burmese python: Hypertrophy or hyperplasia? (pp. 215-215).
Andrade, D. V., Cruz-Neto, A. P., Abe, A. S., Wang, T., Starck, M. (Ed.) & Wang, T. (2005). Specific dynamic action in ectothermic vertebrates: A review of the determinants of postprandial metabolic response in fishes, amphibians and reptiles. In Physiological and ecological adaptations to feeding in vertebrates (pp. 305-324)
Andrade, D. V., De Toledo, L. F., Abe, A. S. & Wang, T. (2004). Ventilatory compensation of the alkaline tide during digestion in the snake Boa constrictor. Journal of Experimental Biology, 207, 1379-1385.

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Kümmel, S., Starke, R., Chen, G., Musat, F., Richnow, H. H. & Vogt, C. (2016). Hydrogen Isotope Fractionation As a Tool to Identify Aerobic and Anaerobic PAH Biodegradation. Environmental Science & Technology, 50(6), 3091-3100. https://doi.org/10.1021/acs.est.5b04819
Adhikari, R. R., Glombitza, C., Nickel, J., Anderson, C. H., Dunlea, A. G., Spivack, A. J., Murray, R. W., D'Hondt, S. & Kallmeyer, J. (2016). Hydrogen utilization potential in subsurface sediments. Frontiers in Microbiology, 7(JAN), Article 8. https://doi.org/10.3389/fmicb.2016.00008
Chamberlain, D. E., Pedrini, P., Brarnbilla, M., Rolando, A. & Girardello, M. (2016). Identifying key conservation threats to Alpine birds through expert knowledge. PeerJ, 4(2), Article 1723. https://doi.org/10.7717/peerj.1723
Volpi, M., Lomstein, B. A., Sichert, A., Røy, H., Jørgensen, B. B. & Kjeldsen, K. U. (2016). Identity, abundance and reactivation kinetics of thermophilic fermentative endospores in marine sediment and seawater. Poster session presented at ISME 16 - 16th International Symposium on Microbial Ecology, Montreal, Canada.
Wu, N., Faber, C., Sun, X., Qu, Y., Wang, C., Ivetic, S., Riis, T., Ulrich, U. & Fohrer, N. (2016). Importance of sampling frequency when collecting diatoms. Scientific Reports, 6, Article 36950. https://doi.org/10.1038/srep36950
Lauridsen, S. E., Leite, G. S. P. C., Leite, C. A. C., Gesser, H., Hedrick, M. S. & Wang, T. (2016). Improved cardiac filling facilitates the postprandial elevation of stroke volume in Python regius. Journal of Experimental Biology, 219(19), 3009-3018. https://doi.org/10.1242/jeb.142729
Christensen, C. B., Lauridsen, H., Christensen-Dalsgaard, J., Pedersen, M. & Madsen, P. T. (2016). In defence of comparative physiology: ideal models for early tetrapods do not exist. Proceedings of the Royal Society B: Biological Sciences, 283(1832), Article 20160716. https://doi.org/10.1098/rspb.2016.0716
Gero, S., Whitehead, H. & Rendell, L. (2016). Individual, unit and vocal clan level identity cues in sperm whale codas. Royal Society Open Science, 3(1), Article 150372. https://doi.org/10.1098/rsos.150372
Revsbech, N. P., Trampe, E. C. L., Lichtenberg, M., Ward, D. M. & Kühl, M. (2016). In Situ Hydrogen Dynamics in a Hot Spring Microbial Mat during a Diel Cycle. Applied and Environmental Microbiology, 82(14), 4209-4217. https://doi.org/10.1128/AEM.00710-16
Kollmann, J., Meyer, S. T., Bateman, R., Conradi, T., Gossner, M. M., de Souza Mendonca, M., Fernandes, G. W., Hermann, J.-M., Koch, C., Mueller, S. C., Oki, Y., Overbeck, G. E., Paterno, G. B., Rosenfield, M. F., Toma, T. S. P. & Weisser, W. W. (2016). Integrating ecosystem functions into restoration ecologyrecent advances and future directions. Restoration Ecology, 24(6), 722-730. https://doi.org/10.1111/rec.12422
Tesson, S. V. M., Okamura, B., Dudaniec, R. Y., Vyverman, W., Löndahl, J., Rushing, C., Valentini, A. & Green, A. J. (2016). Integrating Microorganism and Macroorganism Dispersal: Modes, Techniques and Challenges with Particular Focus on Co-Dispersal. Ecoscience, 22(2-4), 109-124. https://doi.org/10.1080/11956860.2016.1148458
Ye, S., Krauss, K. W., Brix, H., Wei, M., Olsson, L., Yu, X., Ma, X., Wang, J., Yuan, H., Zhao, G., Ding, X. & Moss, R. F. (2016). Inter-Annual Variability of Area-Scaled Gaseous Carbon Emissions from Wetland Soils in the Liaohe Delta, China. PLoS One, 11(8), Article e0160612. https://doi.org/10.1371/journal.pone.0160612
Umana, M. N., Forero-Montana, J., Muscarella, R., Nytch, C. J., Thompson, J., Uriarte, M., Zimmerman, J. & Swenson, N. G. (2016). Interspecific Functional Convergence and Divergence and Intraspecific Negative Density Dependence Underlie the Seed-to-Seedling Transition in Tropical Trees. American Naturalist, 187(1), 99-109. https://doi.org/10.1086/684174
Kamp, A., Glud, R. N., Bristow, L. A., Thamdrup, B. & Stief, P. (2016). Intracellular nitrate in anaerobic nitrate metabolism of sinking diatom aggregates. Abstract from ISME 16 - 16th International Symposium on Microbial Ecology, Montreal, Canada.
Castillo Carrillo, P., Elizalde Vilela, R. & Rasmussen, C. (2016). Inventario de las abejas nativas sin aguijon (Hymenoptera: Apidae: Meliponini) en Tumbes-Perú. Revista Notas Apícolas, 16, 43-50.
Jensen, T. M., Rasmussen, J., Graeber, D., Riis, T. & Baattrup-Pedersen, A. (2016). Invertebraters fødevalg i landbrugspåvirkede vandløb. Poster session presented at Ferskvandssymposium 2016, København, Denmark.
Balslev, H. (2016). Juncaceae. In Catálogo de Plantas y Líquenes de Colombia (pp. 1420-1422).
Hays, G. C., Ferreira, L. C., Sequeira, A. M. M., Meekan, M. G., Duarte, C. M., Bailey, H., Bailleul, F., Bowen, W. D., Caley, M. J., Costa, D. P., Eguíluz, V. M., Fossette, S., Friedlaender, A. S., Gales, N., Gleiss, A. C., Gunn, J., Harcourt, R., Hazen, E. L., Heithaus, M. R. ... Thums, M. (2016). Key Questions in Marine Megafauna Movement Ecology. Trends in Ecology & Evolution, 31(6), 463-475. https://doi.org/10.1016/j.tree.2016.02.015
Ramírez Vargas, C. A., Arias, C. A., Carvalho, P. N., Zhang, L. & Brix, H. (2016). Kinetics and Hydrodynamics of Microbial Electrochemical-based Constructed Wetlands (iMETland) for domestic wastewater treatment. In 15th IWA International Conference on Wetland Systems for Water Pollution Control: Conference Proceedings (Vol. 2, pp. 908).
Weigelt, P., Steinbauer, M., Cabral, J. & Kreft, H. (2016). Late Quaternary climate change shapes island biodiversity. Nature, 532(7597), 99-102. https://doi.org/10.1038/nature17443
Finster, K. (2016). Livets oprindelse. In K. Finster, T. Wang, F. Borchsenius & F. B. Christiansen (Eds.), Evolutionsbiologiske milepæle (pp. 63-89). Aarhus Universitetsforlag.
Williams, C., Alstrup, A. K. O., Bertelsen, M., Leite, C. A. C. & Wang, T. (2016). Local anaesthetic? The systemic effect of subcutaneous lidocaine in Lithobates catebeianus. Abstract from SEB 2016 - Society for Experimental Biology, Brighton, Unknown.
Blacutt, E., Moraes R., M., Gruca, M. & Balslev, H. (2016). Local knowledge about palms (Arecaceae) among children in Bolivia. Botanical Journal of the Linnean Society, 182(2), 505-516. https://doi.org/10.1111/boj.12441
Müller, H., Bosch, J., Griebler, C., Damgaard, L. R., Nielsen, L. P., Lueders, T. & Meckenstock, R. (2016). Long-distance electron transfer by cable bacteria in aquifer sediments. The ISME Journal, 10(8), 2010-2019. https://doi.org/10.1038/ismej.2015.250
Pakeman, R. J., Brooker, R., Alexander, J., Cummins, R., Fielding, D., Gore, S., Hewison, R., Mitchell, R., Moore, E., Orford, K., Pemberton, C., Trinder, C. & Lewis, R. (2016). Long-term impacts of nitrogen deposition on coastal plant communities. Environmental Pollution, 212, 337-347. https://doi.org/10.1016/j.envpol.2016.01.084
Caplat, P., Edelaar, P., Dudaniec, R. Y., Green, A. J., Okamura, B., Cote, J., Ekroos, J., Jonsson, P. R., Löndahl, J., Tesson, S. V. & Petit, E. J. (2016). Looking beyond the mountain: Dispersal barriers in a changing world. Frontiers in Ecology and the Environment, 14(5), 261-268. https://doi.org/10.1002/fee.1280
Laursen, S. N., Andreassen, K., Nielsen, C. L. M., Lauridsen, S. E. & Wang, T. (2016). Low cost of gastric acid secretion during digestion in ball pythons. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 194, 62-66. https://doi.org/10.1016/j.cbpa.2016.01.003
Khalil, N., Ahmad, M., Varshneyc , R., Alvarez, J. A., Avila, C. & Arias, C. A. (2016). Low-Cost sustainable technologies for municipal wastewater treatment in India - Major research initiative with international cooperation under FP7 framework. Abstract from International Conference on Water, Environment, Energy and Society, Bhopal , India.