Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Cvitanich, C., Przybyłowicz, W. J., Mesjasz-Przybyłowicz, J., Blair, M. W., Østergaard, E. & Stougaard, J. (2009). Iron, zinc, and manganese distribution in mature soybean seeds. In The Proceedings of the International Plant Nutrition Colloquium XVI eBook Collection. http://escholarship.org/uc/item/6mh1d8vv

Bek, A. S., Sauer, J., Thygesen, M. B., Duus, J. Ø., Petersen, B. O., Thirup, S., James, E., Jensen, K. J., Stougaard, J. & Radutoiu, S. (2010). Improved Characterization of Nod Factors and Genetically Based Variation in LysM Receptor Domains Identify Amino Acids Expendable for Nod Factor Recognition in Lotus spp. Molecular plant-microbe interactions, 23(1), 58-66. https://doi.org/10.1094/MPMI-23-1-0058

Pertoldi, C., Wójcik, J. M., Tokarska, M., Kawałko, A., Kristensen, T. N., Loeschcke, V., Gregersen, V. R., Coltman, D., Wilson, G. A., Randi, E., Henryon, M. & Bendixen, C. (2010). Genome variability in European and American bison detected using the BovineSNP50 BeadChip. Conservation Genetics, 11(2), 627-634. https://doi.org/10.1007/s10592-009-9977-y

Orlowska, E., Laszcyca, K. M., Urbanski, D. F., Sandal, N. N., Stougaard, J., Jensen, E. Ø., Przybyłowicz, W. J., Mesjasz-Przybyłowicz, J., Klein, M. A., Grusak, M. A., Husted, S. & Cvitanich, C. (2009). Are Lotus species good models for studying iron accumulation in common beans?. Poster session presented at Phaseomics VI, Pontevedra, Spain.

Urbanski, D. F., Sørensen, K., Jurkiewicz, A. M., Przybyłowicz, W. J., Mesjasz-Przybyłowicz, J., Stougaard, J., Jensen, E. Ø. & Cvitanich, C. (2009). IRON, ZINC, AND FERRITIN ACCUMULATION IN COMMON BEANS. Poster session presented at Phaseomics VI, Spain.

Jensen, J. M., Sperling-Petersen, H. U., Mortensen, K. K. & Sørensen, H. P. (2005). Generation of monoclonal antibodies for the assessment of protein purification by recombinant ribosomal coupling. International Journal of Biological Macromolecules, 37(4), 212-7. https://doi.org/10.1016/j.ijbiomac.2005.10.011

Sørensen, H. P., Porsgaard, T. K., Kahn, R. A., Stougaard, P., Mortensen, K. K. & Johnsen, M. G. (2005). Secreted beta-galactosidase from a Flavobacterium sp. isolated from a low-temperature environment. Applied Microbiology and Biotechnology, 70(5), 548-57. https://doi.org/10.1007/s00253-005-0153-0

Laursen, B. S., Sørensen, H. P., Mortensen, K. K. & Sperling-Petersen, H. U. (2005). Initiation of protein synthesis in bacteria. Microbiology and Molecular Biology Reviews, 69(1), 101-23. https://doi.org/10.1128/MMBR.69.1.101-123.2005

Sørensen, H. P. & Mortensen, K. K. (2005). Soluble expression of recombinant proteins in the cytoplasm of Escherichia coli. Microbial Cell Factories, 4(1), 1. https://doi.org/10.1186/1475-2859-4-1

Sørensen, H. P. & Mortensen, K. K. (2005). Advanced genetic strategies for recombinant protein expression in Escherichia coli. Journal of Biotechnology, 115(2), 113-28. https://doi.org/10.1016/j.jbiotec.2004.08.004

Sørensen, H. P., Kristensen, J. E., Sperling-Petersen, H. U. & Mortensen, K. K. (2004). Soluble expression of aggregating proteins by covalent coupling to the ribosome. Biochemical and Biophysical Research Communications, 319(3), 715-9. https://doi.org/10.1016/j.bbrc.2004.05.081

Sørensen, H. P., Sperling-Petersen, H. U. & Mortensen, K. K. (2003). A favorable solubility partner for the recombinant expression of streptavidin. Protein Expression and Purification, 32(2), 252-9. https://doi.org/10.1016/j.pep.2003.07.001

Sørensen, H. P., Sperling-Petersen, H. U. & Mortensen, K. K. (2003). Dialysis strategies for protein refolding: preparative streptavidin production. Protein Expression and Purification, 31(1), 149-54.

Sørensen, H. P., Sperling-Petersen, H. U. & Mortensen, K. K. (2003). Production of recombinant thermostable proteins expressed in Escherichia coli: completion of protein synthesis is the bottleneck. Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences, 786(1-2), 207-14.

Halaban, R., Krauthammer, M., Pelizzola, M., Cheng, E., Kovacs, D., Sznol, M., Ariyan, S., Narayan, D., Bacchiocchi, A., Molinaro, A., Kluger, Y., Deng, M., Tran, N., Zhang, W., Picardo, M. & Enghild, J. J. (2009). Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications. P L o S One, 4(2), e4563. https://doi.org/10.1371/journal.pone.0004563

Jordal, P. B., Dueholm, M. S., Larsen, P., Petersen, S. V., Enghild, J. J., Christiansen, G., Højrup, P., Nielsen, P. H. & Otzen, D. E. (2009). Widespread abundance of functional bacterial amyloid in mycolata and other gram-positive bacteria. Applied and Environmental Microbiology, 75(12), 4101-10. https://doi.org/10.1128/AEM.02107-08

Valnickova, Z., Thaysen-Andersen, M., Højrup, P., Christensen, T., Sanggaard, K. W., Kristensen, T. & Enghild, J. J. (2009). Biochemical characterization of bovine plasma thrombin-activatable fibrinolysis inhibitor (TAFI). B M C Biochemistry, 10, 13. https://doi.org/10.1186/1471-2091-10-13

Voeghtly, L. M., Thøgersen, I., Valnickova, Z., Sanggaard, K. W., Chu, C. T., Oury, T. D. & Enghild, J. J. (2009). Potential Clinical Importance of the Activation Peptide of Prostate-specific Antigen. International Journal of Clinical and Experimental Pathology, 2(6), 588-98.

Troeberg, L., Fushimi, K., Scilabra, S. D., Nakamura, H., Dive, V., Thøgersen, I. B., Enghild, J. J. & Nagase, H. (2009). The C-terminal domains of ADAMTS-4 and ADAMTS-5 promote association with N-TIMP-3. Matrix Biology, 28(8), 463-9. https://doi.org/10.1016/j.matbio.2009.07.005

Karim, A. Y., Kulczycka, M., Kantyka, T., Dubin, G., Jabaiah, A., Daugherty, P. S., Thogersen, I. B., Enghild, J. J., Nguyen, K.-A. & Potempa, J. (2009). A novel matrix metalloprotease-like enzyme (karilysin) of the periodontal pathogen Tannerella forsythia ATCC 43037. Biological Chemistry. https://doi.org/10.1515/BC.2010.009

Hedegaard, J., Sperling-Petersen, H. U., Sørensen, H. P. & Mortensen, K. K. (2001). Remarkable conservation of translation initiation factors: IF1/eIF1A and IF2/eIF5B are universally distributed phylogenetic markers. IUBMB Life, 51(5), 321-7. https://doi.org/10.1080/152165401317190842

Sperling-Petersen, H. U., Sørensen, H. P., Mortensen, K. K. & Moreno, J. M. P. (2000). Macromolecular mimicry in translation initiation: a model for the initiation factor IF2 on the ribosome. IUBMB Life, 50(6), 347-54. https://doi.org/10.1080/713803743

Madurga, M., Borge, M. J. G., Alcorta, M., Fraile, L. M., Fynbo, H. O. U., Jonson, B., Kirsebom, O. S., Nilsson, T., Nyman, G., Perea, A., Riisager, K., Tengblad, O., Tengborn, E. & Van der Walle, J. (2009). Kinematic identification of the βt branch in the decay of ¹¹Li. The European Physical Journal A: Hadrons and Nuclei, 42(3), 415-419. https://doi.org/10.1140/epja/i2008-10769-0

Kowalska, M., Naimi, S., Agramunt, J., Algora, A., Audi, G., Beck, D., Blank, B., Blaum, K., Böhm, C., Breitenfeldt, M., Estevez, E., Fraile, L. M., George, S., Herfurth, F., Herlert, A., Kellerbauer, A., Lunney, D., Minaya-Ramirez, E., Neidherr, D. ... Warring, U. (2009). Preparing a journey to the east of ²⁰⁸Pb with ISOLTRAP: Isobaric purification at A = 209 and new masses for ^211-213Fr and ²¹¹Ra. The European Physical Journal A: Hadrons and Nuclei, 42(3), 351-359. https://doi.org/10.1140/epja/i2009-10835-1

Glover, K. A., Hansen, M. M., Lien, S., Als, T. D., Høyheim, B. & Skaala, O. (2010). A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment. B M C Genetics, 11, 2. https://doi.org/10.1186/1471-2156-11-2

Konnerup, D. & Brix, H. (2010). Nitrogen nutrition of Canna indica: Effects of ammonium versus nitrate on growth, biomass allocation, photosynthesis, nitrate reductase activity and N uptake rates. Aquatic Botany, 92(2), 142-148. https://doi.org/10.1016/j.aquabot.2009.11.004

Sanggaard, K. W., Sonne-Schmidt, C. S., Hansen, T. P. K., Kristensen, T., Wisniewski, H.-G., Thøgersen, I. & Enghild, J. J. (2009). Unraveling of a unique catalytic activity transferring proteins between glycosaminoglycans. Poster session presented at The 6th international Conference on Proteoglycan, Aix-Les-Bains, France.

McClendon, A., Gentry, A., Dickey, J., Brinch, M., Bendsen, S. P., Andersen, A. H. & Osheroff, N. (2008). Bimodal Recognition of DNA Geometry by Human Topoisomerase IIα: Preferential Relaxation of Positively Supercoiled DNA Requires Elements in the C-terminal Domain. Biochemistry, 47, 13169-78.

Thieltges, D. W., Reise, K., Prinz, K. & Jensen, K. T. (2009). Invaders interfere with native parasite-host interactions. Biological Invasions, 11, 1421-1429. https://doi.org/10.1007/s10530-008-9350-y

Grozav, A. G., Chikamori, K., Kozuki, T., Grabowski, D. R., Bukowski, R. M., Kinter, M., Andersen, A. H., Ganapathi, R. & Ganapathi, M. K. (2009). Casein Kinase Iδ/ε Phosphorylates serine 1106 in Topoisomerase IIα and Regulates Cleavable Complex Formation. Nucleic Acids Research, 37, 382-92.

Bendsen, S. P., Østergaard, V. H., Skouboe, C., Brinch, M., Knudsen, B. R. & Andersen, A. H. (2009). The QTK-loop is Essential for the Communication Between the N-terminal ATPase Domain and the Central Cleavage/Ligation Domain in Human Topoisomerase IIα. Biochemistry, 6508-15.

Nielsen, I., Bentsen, I. B., Lisby, M., Hansen, S., Mundbjerg, K., Andersen, A. H. & Bjergbæk, L. (2009). A Flp-nick system to study repair of a single protein-bound nick in vivo. Nature Methods, 753-7.

Rasmussen, J. T. (2009). Bioactivity of milk fat globule membrane proteins. Australian Journal of Dairy Technology, 64(1), 63-67.

Sandal, N. N., Madsen, L. H., Radutoiu, E. S., Tirichine, L., Krusell, L., Yokota, K., Cvitanich, C., Hougaard, B. K., Bek, A. S., Heckmann, A. B. L., Fukai, E., Rueda, P., Zitzenbacher, S., Zak, K., Bras, C. P., Spaink, H., Sato, S., Tabata, S. & Stougaard, J. (2009). Characterization of plant symbiotic genes with the help of the model legume Lotus japonicus. Paper presented at World Soybean Conference, Beijing, China.

Kiss, E., Olah, B., Kalo, P., Morales, M., Heckmann, A. B. L., Borbola, A., Lozsa, A., Kontar, K., Middleton, P., Downie, J. A., Oldroyd, G. ED. & Endre, G. (2009). LIN, a Novel Type of U-box/WD40 Protein, Controls Early Infection by Rhizobia in Legumes. Plant Physiology, 151(3), 1239-1249.

Wæhrens, L. N., Heegaard, C. W., Gilbert, G. E. & Rasmussen, J. T. (2009). Bovine Lactadherin as a Calcium-independent Imaging Agent of Phosphatidylserine Expressed on the Surface of Apoptotic HeLa Cells. Journal of Histochemistry and Cytochemistry, 57(10), 907-914.

Hirsch, S., Jiyoung, K., Munoz, A., Heckmann, A. B. L., Downie, J. A. & Oldroyd, G. ED. (2009). GRAS Proteins Form a DNA Binding Complex to Induce Gene Expression during Nodulation Signaling in Medicago truncatula. Plant Cell, 21(2), 545-557.

Heckmann, A. B., Hebelstrup, K. H., Larsen, K., Micaelo, N. M. & Jensen, E. Ø. (2006). A single hemoglobin gene in Myrica gale retains both symbiotic and non-symbiotic specificity. Plant Molecular Biology, 61(4-5), 769-79. https://doi.org/10.1007/s11103-006-0048-1

Poulsen, R. H., Wæhrens, L. N., Falborg, L., Heegaard, C. W., Rasmussen, J. T. & Rehling, M. (2009). Myocadial apoptosis in an ischemic-reperfusion porcine model, and how it is influenced by occlution time and preconditioning. Hypertension, (5), 1185.

Boertmann, D., Olsen, K. & Gilg, O. (2010). Ivory gulls breeding on ice. Polar Record, 46, 86-88. https://doi.org/10.1017/S0032247409008626

Fløjgaard, C., Morueta-Holme, N., Skov, F., Madsen, A. B. & Svenning, J.-C. (2009). Potential 21st century changes to the mammal fauna of Denmark – implications of climate change, land-use, and invasive species. IOP Conference Series: Earth and Environmental Science, 8, 012016. https://doi.org/10.1088/1755-1315/8/1/012016

Skov, F., Nygaard, B., Wind, P., Borchsenius, F., Normand, S., Balslev, H., Fløjgaard, C. & Svenning, J.-C. (2009). Impacts of 21st century climate changes on flora and vegetation in Denmark. IOP Conference Series: Earth and Environmental Science, 8, 012015. https://doi.org/10.1088/1755-1315/8/1/012015

Clausen, O. R., Egholm, D. L., Poulsen, J. B. & Refstrup, L. H. (2009). SDEM modelling of fault-propagation folding: a dynamic-kinematicanalysis. Geophysical Research Abstracts, (EGU2009-4652).

Goledowski, B., Clausen, O. R. & Nielsen, S. B. (2009). The offshore record of variable Cenozoic sediment flux from Western Scandinavia. Geophysical Research Abstracts.

Heinemeier, J., Ringbom, Å., Hale, J., Lancaster, L., Lindroos, A. & Sveinbjörnsdóttir, Á. E. (2006). AMS mortar dating in Medieval and Classical Archaeology - a decade of development and testing. Abstract from 19^th international Radiocarbon Conference, Oxford, United Kingdom.

Sørensen, H. K. (2010). Ebbinghaus, Heinz-Dieter [Peckhaus, Volker]: Ernst Zermelo. An approach to his life and work. In cooperation with Volker Peckhaus. Berlin: Springer (ISBN 978-3-540-49551-2/hbk). xiv, 356 p. EUR 49.95/net; SFR 82.00; $ 64.95; £38.50 (2007). Zentralblatt MATH, (1176.01011).

Damgaard, C. K. & Lykke-Andersen, J. (2013). Regulation of ARE-mRNA Stability by Cellular Signaling: Implications for Cancer. In J. Y. Wu (Ed.), RNA and Cancer (pp. 153-180). Springer. https://doi.org/10.1007/978-3-642-31659-3_7

Friedrich, W. L., Kromer, B., Friedrich, M., Heinemeier, J., Pfeiffer, T. & Talamo, S. (2009). Santorini Eruption Radiocarbon Dated to 1627-1600 BC: Further Discussion. In S. W. Manning & M. J. Bruce (Eds.), Tree-rings, Kings, and Old World Archaeology and Environment: Papers Presented in Honor of Peter Ian Kuniholm (pp. 293-298). Left Coast Press.

Meyer, R. L. (2010). Microsensors. In R. Seviour & P. H. Nielsen (Eds.), Microbial Ecology of Activated Sludge IWA Publishing.

Bertram, H. C., Meyer, R. L. & Andersen, H. J. (2009). A look at NMR relaxometry applications in meat science – recent advances in coupling nmr realxometry with spectroscopic, thermodynamic, microscopic and sensory measurements. In M. Guojonsdottir, P. S. Belton & G. A. Webb (Eds.), Magnetic resonance in food science: Challenges in a changing world (pp. 241-250). Royal Society of Chemistry.

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