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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Rattan, S., Kaul, S. (Ed.) & Wadhwa, R. (Ed.) (2003). Aging outside the body: usefulness of the Hayflick system. In Aging of Cells Inside and Outside the Body (pp. 1-8). Kluwer Academic Publishers.
Rattan, S. (2001). Applying hormesis in aging research and therapy. Human & Experimental Toxicology, 20, 281-285.
Rattan, S. (2003). Biology of aging and possibilities of gerontomodulation. Proc. Ind. Nat. Sci. Acad., B69, 157-164.
Rattan, S. & von Zglinicki, T. (Ed.) (2003). Transcriptional and translational dysregulation during aging. In Aging at the Molecular Level (pp. 179-191). Kluwer Academic Publishers.
Rattan, S. (2001). Ungdommens Kilde. Aktuel Naturvidenskab, 3, 25-27.
Rattan, S. & Kveiborg, M. (2000). Alderdomsbiologi - det næste skridt. Aktuel Naturvidenskab, 2(4), 4-6.
Rattan, S. & Clark, B. F. C. (1999). Protein synthesis, post-translational modifications and aging. In Molecular Biology of Aging, Alfred Benzon Symposium 44 (pp. 320-331). Munksgaard .
Rattan, S. & Siboska, G. E. (2001). Kinetin: et potentielt anti-aldringsmolekyle. Dansk Kemi, 82, 45-47.
Ravn, P., Danielczyk, A., Jensen, K. B., Kristensen, P., Karsten, U. & Goletz, S. (2005). Multivalent antibody fragments toward the tumor-associated core-1 disaccharide generated by phage display of multimeric scFv repertoires. J. Mol. Biol., 343(4), 985-996.
Ravn, P., Kjær, S., Hobolt Jensen, K., Wind, T., Jensen, K. B., Kristensen, P., Brosh, R. M., Orren, D. K., Bohr, V. & Clark, B. F. C. (2000). Identification of phage antibodies towards the Werner protein by selection of Western blots. Electrophoresis, 21, 509-516.
Resch, Z. T., Chen, B. K., Bale, L. K., Oxvig, C., Overgaard, M. T. & nullC.A., C. (2004). Pregnancy-associated plasma protein-A gene expression as a target of inflammatory cytokines. Endocrinology, 145, 1124-1129.
Rivas, S., Rougon-Cardoso, A., Smoker, M., Schauser, L., Yoshioka, H. & Jones, J. D. G. (2004). CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence. EMBO Journal, 23, 2156-2165.
Romero, I., Jørgensen, P., Bolwig, G., Fraser, P. E., Rogaeva, E., Mann, D., Havsager, A. M. & Jørgensen, A. L. (1999). A presenilin-1 Thr116Asn substitution in a family with early-onset Alsheimer's disease. NeuroReport, 10, 2255-2260.
Sandal, N., Krusell, L., Radutoiu, S., Olbryt, M., Pedrosa, A., Stracke, S., Parniske, M., Bachmaier, A., Sato, S., Tabata, S., Ketelsen, T. & Stougaard, J. (2002). A genetic linkage map of the model legume Lotus japonicus and strategies for fast mapping of new loci. Genetics, 161, 1673-1683.
Sanz, L., García-Bermejo, L., Blanco, F. J., Kristensen, P., Feijóo, M., Suárez, E., Blanco, B. & Álvarez-Vallina, L. (2003). A novel cell binding site in the coiled-coil domain of laminin involved in capillary morphogenesis. EMBO Journal, 22, 1508-1517.
Sau, A. K., Tribble, G., Grainge, I., Fröhlich, R. F., Knudsen, B. R. & Jayaram, M. (2001). Biochemical and kinetic analysis of the RNase active sites of the Integrase/Tyrosine family site-specific DNA recombinanses. Journal of Biological Chemistry, 276, 46612-46623.
Scaal, M., Füchtbauer, E.-M. & Brand-Saberi, B. (2001). c-Dermol expression is upregulated by BMP signal. Brain Structure and Function, 203, 1-7.
Scaal, M., Pröls, F., Füchtbauer, E.-M., Patel, K., Hornik, C., Köhler, T., Christ, B. & Brand-Saberi, B. (2002). BMPs induce dermal markers and ectopic feather tracts. Mech. Dev., 110(1-2), 51-60.
Schauser, L., Roussis, A., Stiller, J. & Stougaard, J. (1999). A plant regulator controlling development of symbiotic root nodules. Nature, 402, 191-195.
Schulte-Herbrüggen, T., Untidt, T. S., Nielsen, N. C. & Sørensen, O. W. (2001). Broadband composite spin-state-selective rotations for NMR spectroscopy on partially aligned molecules. Journal of Chemical Physics, 115, 8506-8517.
Selzer, R. R., Nyaga, S., Tuo, J., May, A., Muftuoglu, M., Christiansen, M., Citterio, E., Brosh Jr., M. & Bohr, V. (2002). Differential requirement for the ATPase domain of the Cockayne syndrome group B gene in the processing of UV-induced DNA damage and 8-oxoguanine lesions in human cells. Nucleic Acids Research, 30, 782-793.
Sengupta, J., Nilsson, J., Gursky, R., Spahn, C. M. T., Nissen, P. & Frank, J. (2004). Identification of the versatile scaffold protein RACK1 on the eukaryotic ribosome by cryo-electron microscopy. Nat. Struct. Biol. ,11, 957-962.
Sengupta, J., Nilsson, J., Gursky, R., Spahn, C. M. T., Nissen, P. & Frank, J. (2004). Protein Data Bank deposition: Accession number 1TRJ.
Shao, Z., Vollrath, F., Yang, Y. & Thøgersen, H. C. (2003). Structure and behaviour of regenerated spider silk. Macromolecules, 36, 1157-1161.
Shaw, A. C., Rossel Larsen, M., Roepstorff, P., Justesen, J., Christiansen, G. & Birkelund, S. (1999). Mapping and identification of interferon gamma-regulated HeLa cell proteins separated by immobilized pH gradient two-dimensional gel electrophoresis. Electrophoresis, 20, 984-993.
Sheng, H., Enghild, J. J., Bowler, R., Patel, M., Calvi, C. L., Day, B. J., Pearlstein, R. D., Crapo, J. D. & Warner, D. S. (2002). Effects of metalloporphyrin catalytic antioxidants in experimental brain ischemia. Free Radic. Biol. Med., 33, 947-961.
Shi, J., Rasmussen, J. T., Heegaard, C. W. & Gilbert, G. E. (2004). Reversible exposure of phosphatidylserine on thrombin-stimulated platelets detected by binding of lactadherin. Paper presented at [3537] The American Society of Hematology 46th Annual Meeting, December 4-7, 2004 San Diego, California.
Smidt, K. C. J., Hansen, L. L., Søgaard, T. M. M., Petersen, L. K., Knudsen, U. B. & Martensen, P. M. (2003). A nine nucleotide deletion and splice variation of the coding region of the interferon induced ISG12 gene. B B A - Molecular Basis of Disease, 1638, 227-234.
Smith, L., Price-Jones, M., Hughes, K., Jensen, J. E., Poulsen, F., Wiberg, F. C. & Shank, R. P. (2000). Evaluation of the effects of topiramate on kainate-induced 14C guanidinium ion flux through GluR6 channels in transfected BHK cells. Epilepsia, 41, 48-51.
Spahn, C. M., Gomez-Lorenzo, M. G., Grassucci, R. A., Jørgensen, R., Andersen, G. R., Beckmann, R., Penczek, P. A., Ballesta, J. P. & Frank, J. (2004). Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome. EMBO Journal, 23, 1008-1019.
Stensbol, T. B., Jensen, H. S., Nielsen, B., Johansen, T. N., Jensen, J. E., Frydenvang, K. & Krogsgaard-Larsen, P. (2001). Stereochemistry and molecular pharmacology of (S)-thio-ATPA, a new potent and selective GluR5 agonist. European Journal of Pharmacology, 411, 245-253.
Stensbøl, T. A., Sløk, F. A., Trometer, J., Hurt, S., Ebert, B., Kjøller, C., Jensen, J. E., Madsen, U., Diemer, N. H. & Krogsgaard-Larsen, P. (1999). Characterization of the binding of [3H]ACPA to ionotrotic glutamate receptors. European Journal of Pharmacology, 373, 251-262.
Stensbøl, T. B., Borre, L., Jensen, J. E., Johansen, J., Madsen, U., Ebert, B. & Krogsgaard-Larsen, P. (1999). Resolution of (RS)-2-amino-3-(5-tert-butyl-3- hydroxy-4-isoxalyl)propionic acid (ATPA) and pharmacological characterization of the two enantiomers. European Journal of Pharmacology, 380, 153-162.
Stepanov, V. G. & Nyborg, J. (2001). Efficient separation of Thermus aquaticus EF-Tu functional complexes. Biochem. Biophys. Res. Commun., 282, 108-115.
Stepanov, V. G. & Nyborg, J. (2002). Thermal stability of aminoacyl-tRNAs in aquous solutions. Extremophiles, 6, 485-490.
Stevnsner, T., Thorslund, T. & Bohr, V. (2004). Aldringens molekylærbiologi. Aktuel Naturvidenskab, 1, 4-7.
Stevnsner, T. & Bohr, V. (2004). Forskning i aldringens molekylærbiologi. In Ny aldringsforskning - resultater og perspektiver (ISBN 87-90651-39-1 ed., pp. 19-23). Ældreforum.

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Pawlowski, J., Esling, P., Lejzerowicz, F., Cordier, T., Visco, J. A., Martins, C. I. M., Kvalvik, A., Staven, K. & Cedhagen, T. (2016). Benthic monitoring of salmon farms in Norway using foraminiferal metabarcoding. Aquaculture Environment Interactions, 8, 371-386. https://doi.org/10.3354/AEI00182
Riis, T., Graeber, D., Levi, P. S., Rasmussen, J., Mia Jensen, T., Rosenhøj-Leth, S., Machado, É. M. N. & Baattrup-Pedersen, A. (2016). Benthic primary production and nutrient retention under multiple stressors in agricultural streams. Abstract from Society for Freshwater Science Annual Meeting, Sacramento, United States.
Welinder, K. G., Hansen, R., Overgaard, M. T., Brohus, M., Sonderkaer, M., von Bergen, M., Rolle-Kampczyk, U., Otto, W., Lindahl, T. L., Arinell, K., Evans, A. L., Swenson, J. E., Revsbech, I. G. & Frobert, O. (2016). Biochemical Foundations of Health and Energy Conservation in Hibernating Free-ranging Subadult Brown Bear Ursus arctos. Journal of Biological Chemistry, 291(43), 22509-22523. https://doi.org/10.1074/jbc.M116.742916
Bester, K., Bollmann, U. E., Casas, M. E., Brandt, K. K., Lyu, T., Carvalho, P. & Brix, H. (2016). Biodegradation of biocides in soils, soil filters and other biofilm reactors. Poster session presented at SETAC Europe 2016, Nantes, France.
Naeem, S., Prager, C., Weeks, B., Varga, A., Flynn, D. F. B., Griffin, K., Muscarella, R., Palmer, M., Wood, S. & Schuster, W. (2016). Biodiversity as a multidimensional construct: A review, framework and case study of herbivory’s impact on plant biodiversity. Proceedings of the Royal Society B: Biological Sciences, 283(1844), Article 20153005. https://doi.org/10.1098/rspb.2015.3005
Steinbauer, M., Field, R., Fernández-Palacios, J. M., Irl, S. D. H., Otto, R., Schaefer, H. & Beierkuhnlein, C. (2016). Biogeographic ranges do not support niche theory in radiating Canary Island plant clades. Global Ecology and Biogeography, 25(7), 792-804. https://doi.org/10.1111/geb.12425
Poorter, L., Ongers, F. B., Aide, T. M., Zambrano, A. M. A., Balvanera, P., Becknell, J. M., Boukili, V., Brancalion, P. H. S., Broadbent, E. N., Chazdon, R. L., Craven, D., de Almeida-Cortez, J. S., Cabral, G. A. L., de Jong, B. H. J., Denslow, J. S., Dent, D. H., DeWalt, S. J., Dupuy, J. M., Duran, S. M. ... Rozendaal, D. M. A. (2016). Biomass resilience of Neotropical secondary forests. Nature, 530(7589), 211-214. https://doi.org/10.1038/nature16512
Pornpongrungrueng, P., Gustafsson, M. H. G., Borchsenius, F., Koyama, H. & Chantaranothai, P. (2016). Blumea (Compositae: Inuleae) in continental Southeast Asia. Kew Bulletin, 71(1), 1-46. Article 1. https://doi.org/10.1007/S12225-016-9612-2
Jensen, B., Storz, J. F. & Fago, A. (2016). Bohr effect and temperature sensitivity of hemoglobins from highland and lowland deer mice. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 195, 10-14. https://doi.org/10.1016/j.cbpa.2016.01.018
Ripple, W. J., Abernethy, K., Betts, M. G., Chapron, G., Dirzo, R., Galetti, M., Levi, T., Lindsey, P. A., Macdonald, D. W., Machovina, B., Newsome, T. M., Peres, C. A., Wallach, A. D. & Wolf, C. (2016). Bushmeat hunting and extinction risk to the world’s mammals. Royal Society Open Science, 3(10). https://doi.org/10.1098/rsos.160498
Sulu-Gambari, F., Seitaj, D., Meysman, F. J. R., Schauer, R., Polerecky, L. & Slomp, C. P. (2016). Cable Bacteria Control Iron-Phosphorus Dynamics in Sediments of a Coastal Hypoxic Basin. Environmental Science & Technology, 50(3), 1227-1233. https://doi.org/10.1021/acs.est.5b04369
Bayley, M., Damsgaard, C., Thomsen, M., Andersen, M., Phuong, L. M., Huong, D. T. T. & Wang, T. (2016). Can air-breathing fish be adapted to higher than present temperatures?. Abstract from SEB 2016 - Society for Experimental Biology, Brighton, Unknown.
Lyu, T., Carvalho, P., Zhang, L., Zhang, Y., Button, M., Arias, C. A., Weber, K. & Brix, H. (2016). Can plant species and system design influence the microbial community metabolic function in constructed wetland mesocosms treating pesticides?. Abstract from 15th IWA Specialist Conference on Wetland Systems for Water Pollution Control, Gdansk, Poland.
Chazdon, R. L., Broadbent, E. N., Rozendaal, D. M. A., Bongers, F., Zambrano, A. M. A., Aide, T. M., Balvanera, P., Becknell, J. M., Boukili, V., Brancalion, P. H. S., Craven, D., Almeida-Cortez, J. S., Cabral, G. A. L., de Jong, B., Denslow, J. S., Dent, D. H., DeWalt, S. J., Dupuy, J. M., Durán, S. M. ... Poorter, L. (2016). Carbon sequestration potential of second-growth forest regeneration in the Latin American tropics. Science Advances, 2(5), Article e1501639. https://doi.org/10.1126/sciadv.1501639
Feng, G., Mi, X., Yan, H., Li, F. Y., Svenning, J.-C. & Ma, K. (2016). CForBio: a network monitoring Chinese forest biodiversity. Science Bulletin, 61(15), 1163-1170. https://doi.org/10.1007/s11434-016-1132-9
Boardman, L., Sorensen, J. G., Kostal, V., Simek, P. & Terblanche, J. S. (2016). Chilling slows anaerobic metabolism to improve anoxia tolerance of insects. Metabolomics, 12(12), Article 176. https://doi.org/10.1007/s11306-016-1119-1
Alvarez, L. J., Rasmussen, C. & Abrahamovich, A. H. (2016). Clave para la identificación de las especies argentinas del género Plebeia Schwarz (Apidae: Meliponini), con descripción de una nueva especie. Revista del Museo Argentino de Ciencias Naturales, nueva serie, 18(1), 65-74.
Li, Y., Li, X., Sandel, B., Blank, D., Liu, Z., Liu, X. & Yan, S. (2016). Climate and topography explain range sizes of terrestrial vertebrates. Nature Climate Change, 6(5), 498-502. https://doi.org/10.1038/nclimate2895
Boardman, L., Sorensen, J. G., Kostal, V., Simek, P. & Terblanche, J. S. (2016). Cold tolerance is unaffected by oxygen availability despite changes in anaerobic metabolism. Scientific Reports, 6, Article 32856. https://doi.org/10.1038/srep32856
Alvarez, J. A., de la Varga, D., Pascual , A., van Oirschot, D., Killian, R., Carvalho, P., Brix, H. & Arias, C. A. (2016). Combined technologies, HUSB and aerated treatment wetlands for the treatment of urban and industrial wastewaters. Abstract from 15th IWA Specialist Conference on Wetland Systems for Water Pollution Control, Gdansk, Poland.
Bakker, E. S., Gill, J. L., Johnson, C. N., Vera, F. W. M., Sandom, C. J., Asner, G. P. & Svenning, J. C. (2016). Combining paleo-data and modern exclosure experiments to assess the impact of megafauna extinctions on woody vegetation. Proceedings of the National Academy of Sciences (PNAS), 113(4), 847-855. https://doi.org/10.1073/pnas.1502545112
Somjaiai, P., Barfod, A. & Jampeetong, A. (2016). Comparative anatomy of the peduncles of Thai Sugar Palms provides insight on putative sugar transport mechanisms. Poster session presented at EUNOPS XIV, Valencia, Spain.
Da Silva, M.-A. O., Bertelsen, M. F., Wang, T., Prause, J. U., Svahn, T. & Heegaard, S. (2016). Comparative morphology of the snake spectacle using light and transmission electron microscopy. Veterinary Ophthalmology, 19(4), 285-90. https://doi.org/10.1111/vop.12281
Lyu, T., Carvalho, P., Zhang, Y., Arias, C. A. & Brix, H. (2016). Comparison of the pesticides imazalil and tebuconazole mitigation in hydroponic microcosms and mesocosm-scale constructed wetlands. Paper presented at III Pan-American Conference on Wetland Systems for the Treatment and Improvement of Water Quality, Santa Fe, Argentina.
Lyu, T., Carvalho, P., Zhang, L., Zhang, Y., Arias, C. A. & Brix, H. (2016). Comparison of the pesticide tebuconazole removal in unsaturated and saturated constructed wetland mesocosms. Abstract from 15th IWA Specialist Conference on Wetland Systems for Water Pollution Control, Gdansk, Poland.
Alexander, C., Arge, L., Bøcher, P. K., Revsbæk, M., Sandel, B., Svenning, J. C., Tsirogiannis, C. & Yang, J. (2016). Computing river floods using massive terrain data. In J. A. Miller, D. O'Sullivan & N. Wiegand (Eds.), Geographic Information Science: 9th International Conference, GIScience 2016 (Vol. 9927, pp. 3-17). Springer VS. https://doi.org/10.1007/978-3-319-45738-3_1
McKenzie, D. J., Axelsson, M., Chabot, D., Claireaux, G., Cooke, S. J., Corner, R. A., De Boeck, G., Domenici, P., Guerreiro, P. M., Hamer, B., Jørgensen, C., Killen, S. S., Lefevre, S., Marras, S., Michaelidis, B., Nilsson, G. E., Peck, M. A., Perez-Ruzafa, A., Rijnsdorp, A. D. ... Metcalfe, J. D. (2016). Conservation physiology of marine fishes: state of the art and prospects for policy. Conservation Physiology, 4(1), cow046. Article cow046. https://doi.org/10.1093/conphys/cow046
Swenson, N. G., Weiser, M. D., Mao, L., Normand, S., Rodríguez, M. Á., Lin, L., Cao, M. & Svenning, J.-C. (2016). Constancy in functional space across a species richness anomaly. American Naturalist, 187(4), E83-E92. https://doi.org/10.1086/685083
Kumar, A., Natarajan, C., Moriyama, H., Witt, C. C., Weber, R. E., Fago, A. & Storz, J. (2016). Constraints on mutational pathways of hemoglobin evolution.
Zhang, L., Carvalho, P., Lyu, T., Zhang, Y., Arias, C. A. & Brix, H. (2016). Constructed wetland design effects on ibuprofen removal – a mesocosm scale study. Abstract from 15th IWA Specialist Conference on Wetland Systems for Water Pollution Control, Gdansk, Poland.
de la Varga, D., Soto, M., Arias, C. A., van Oirschot, D., Kilian, R., Pascual , A. & Alvarez, J. A. (2016). Constructed Wetlands for Industrial Wastewater Treatment and Removal of Nutrients. In A. Val del Rio, J. L. campos Goméz & A. Mosquera Corral (Eds.), Technologies for the Treatment and Recovery of Nutrients from Industrial Wastewater (pp. 202-230). IGI global. https://doi.org/10.4018/978-1-5225-1037-6.ch008
Almeida, C. M. R., Carvalho, P. N., Fernandes, J. P., Basto, M. C. P. & Mucha, A. P. (2016). Constructed wetlands for livestock wastewater treatment: Antibiotics removal and effects on CWs performance. In Phytoremediation: Management of Environmental Contaminants (Vol. 4, pp. 267-281). Springer Publishing Company. https://doi.org/10.1007/978-3-319-41811-7_14