Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Waedegaard, K. J., Sandkamm, D. B., Mouskeftaras, A., Guizard, S. & Balling, P. (2014). Probing ultrashort-pulse laser excitation of sapphire: From the initial carrier creation to material ablation. Europhysics Letters, 105(4), Article 47001. https://doi.org/10.1209/0295-5075/105/47001

Damgård, I. B., Fehr, S., Salvail, L. & Schaffner, C. (2014). Secure identification and QKD in the bounded-quantum-storage model. Theoretical Computer Science, 560(1), 12-26. https://doi.org/10.1016/j.tcs.2014.09.014

Dahl, M. & Damgård, I. B. (2014). Universally composable symbolic analysis for two-party protocols based on homomorphic encryption. In P. Q. Nguyen & E. Oswald (Eds.), Advances in Cryptology – EUROCRYPT 2014: 33rd Annual International Conference on the Theory and Applications of Cryptographic Techniques, Copenhagen, Denmark, May 11-15, 2014. Proceedings (pp. 695-712). Springer VS. https://doi.org/10.1007/978-3-642-55220-5_38

Hede, M. S., Fjelstrup, S. & Knudsen, B. R. (2015). DNA Sensors for Malaria Diagnosis. Nano Life, 5(2), Article 1541003. https://doi.org/10.1142/S1793984415410032

Damgård, I. B. & Nielsen, J. B. (2014). Adaptive versus static security in the UC Model. In S. S. M. Chow , J. K. Liu, L. C. K. Hui & S. M. Yiu (Eds.), Provable Security: 8th International Conference, ProvSec 2014, Hong Kong, China, October 9-10, 2014. Proceedings (pp. 10-28). Springer VS. https://doi.org/10.1007/978-3-319-12475-9_2

Savolainen, J.-M., Kristensen, P., Gruener-Nielsen, L. & Balling, P. (2014). Broadband Mode Converters by Femtosecond-Laser-Light Refractive-Index Tailoring. I E E E Photonics Technology Letters, 26(14), 1454-1457. https://doi.org/10.1109/LPT.2014.2326884

Da Rocha Pinto, P., Dinsdale-Young, T. & Gardner, P. (2014). TaDA: A logic for time and data abstraction. In R. Jones (Ed.), ECOOP 2014 – Object-Oriented Programming: 28th European Conference, Uppsala, Sweden, July 28 – August 1, 2014. Proceedings (pp. 207-231). Springer. https://doi.org/10.1007/978-3-662-44202-9_9

Frederiksen, T. K., Jakobsen, T. P. & Nielsen, J. B. (2014). Faster Maliciously Secure Two-Party Computation Using the GPU. In M. Abdalla & R. D. Prisco (Eds.), Security and Cryptography for Networks: 9th International Conference, SCN 2014, Amalfi, Italy, September 3-5, 2014. Proceedings (pp. 358-379 ). Springer. https://doi.org/10.1007/978-3-319-10879-7_21

Lindroos, A., Orsel, E., Heinemeier, J., Lill, J.-O. & Gunnelius, K. (2014). Radiocarbon dating of Dutch mortars made from burned shells. Radiocarbon: An International Journal of Cosmogenic Isotope Research, 56(3), 959-968. https://doi.org/10.2458/56.16508

Rasmussen, P. M., Jespersen, S. N. & Ostergaard, L. (2015). The effects of transit time heterogeneity on brain oxygenation during rest and functional activation. Journal of Cerebral Blood Flow and Metabolism, 35(3), 432-42. https://doi.org/10.1038/jcbfm.2014.213

Klemmer, M., Meinholz, M. & Stalke, D. (2014). Novel Sulfur Diimide Ligands. Poster session presented at DanScatt annual meeting, Lyngby, Denmark.

Fischer, K. F. F., Borup, K. A. & Iversen, B. B. (2014). Extracting the resistivity tensor from van der Pauw measurements. Poster session presented at DanScatt annual meeting, Lyngby, Denmark.

Andersen, K. R., Leksa, N. C. & Schwartz, T. U. (2013). Optimized E. coli expression strain LOBSTR eliminates common contaminants from His-tag purification. Proteins - Structure Function and Bioinformatics, 81(11), 1857-1861. https://doi.org/10.1002/prot.24364

Neubauer, C., Gao, Y.-G., Andersen, K. R., Dunham, C. M., Kelley, A. C., Hentschel, J., Gerdes, K., Ramakrishnan, V. & Brodersen, D. E. (2009). The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE. Cell, 139(6), 1084-1095. https://doi.org/10.1016/j.cell.2009.11.015

Andersen, K. R., Jonstrup, A. T., Van, L. B. & Brodersen, D. E. (2009). The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site. RNA, 15(5), 850-61. https://doi.org/10.1261/rna.1489409

Assenholt, J., Mouaikel, J., Andersen, K. R., Brodersen, D. E., Libri, D. & Jensen, T. H. (2008). Exonucleolysis is required for nuclear mRNA quality control in yeast THO mutants. RNA, 14(11), 2305-13. https://doi.org/10.1261/rna.1108008

Sato, S. & Andersen, S. U. (2014). Genome Sequencing. In S. Tabata & J. Stougaard (Eds.), The Lotus japonicus Genome (pp. 35-40). Springer. https://doi.org/10.1007/978-3-662-44270-8_4

Hirakawa, H., Mun, T., Sato, S. & Andersen, S. U. (2014). Legume and Lotus japonicus Databases. In S. Tabata & J. Stougaard (Eds.), The Lotus japonicus Genome (pp. 259-267). Springer. https://doi.org/10.1007/978-3-662-44270-8_23

Brodal, G. S., Sioutas, S., Tsichlas, K. & Zaroliagis, C. (2010). D²-tree: A new overlay with deterministic bounds. In O. Cheong , K.-Y. Chwa & K. Park (Eds.), Algorithms and Computation: 21st International Symposium, ISAAC 2010, Jeju, Korea, December 15-17, 2010, Proceedings, Part II (pp. 1-12). Springer VS. https://doi.org/10.1007/978-3-642-17514-5_1

Brodal, G. S., Sioutas, S., Pantazos, K. & Zaroliagis, C. D. (2015). D2-tree: A new overlay with deterministic bounds. Algorithmica, 72(3), 860-883. https://doi.org/10.1007/s00453-014-9878-4

Fritsch, J., Dalsgaard, P., Hansen, N. B. & Petersen, M. G. (Eds.) (2013). Proceedings of the 2013 Student Interaction Design Research conference (SIDeR 2013).

Whitehead, H. & Gero, S. (2014). Using social structure to improve mortality estimates: an example with sperm whales. Methods in Ecology and Evolution, 5(1), 27-36. https://doi.org/10.1111/2041-210X.12124

McDonald, B. & Ponganis, P. J. (2014). Deep-diving sea lions exhibit extreme bradycardia in long-duration dives. Journal of Experimental Biology, 217, 1525-1534. https://doi.org/10.1242/jeb.098558

Maresh, J. L., Simmons, S. E., Crocker, D. E., McDonald, B., Williams, T. M. & Costa, D. P. (2014). Free-swimming northern elephant seals have low field metabolic rates that are sensitive to an increased cost of transport. Journal of Experimental Biology, 217, 1485-1495. https://doi.org/10.1242/jeb.094201

Wright, A. K., Ponganis, K. V., McDonald, B. & Ponganis, P. J. (2014). Heart rates of emperor penguins diving at sea: implications for oxygen store management. Marine Ecology Progress Series, 496, 85-98. https://doi.org/10.3354/meps10592

Lindroos, A., Ranta, H., Heinemeier, J. & Lill, J. O. (2014). ¹⁴C chronology of the oldest Scandinavian church in use. An AMS/PIXE study of lime lump carbonate in the mortar. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, 331, 220-224. https://doi.org/10.1016/j.nimb.2014.02.132

Gearheart, G., Kooyman, G. L., Goetz, K. T. & McDonald, B. (2014). Migration front of post-moult emperor penguins. Polar Biology, 37(3), 435-439. https://doi.org/10.1007/s00300-014-1449-2

Malaspinas, A. S., Lao, O., Schroeder, H., Rasmussen, M., Raghavan, M., Moltke, I., Campos, P. F., Sagredo, F. S., Rasmussen, S., Gonçalves, V. F., Albrechtsen, A., Allentoft, M. E., Johnson, P. L. F., Li, M., Reis, S., Bernardo, D. V., Degiorgio, M., Duggan, A. T., Bastos, M. ... Willerslev, E. (2014). Two ancient human genomes reveal Polynesian ancestry among the indigenous Botocudos of Brazil. Current Biology, 24(21), R1035-R1037. https://doi.org/10.1016/j.cub.2014.09.078

Maxwell, S. M., Hazen, E. L., Bograd, S. J., Halpern, B. S., Breed, G. A., Nickel, B., Teutschel, N. M., Crowder, L. B., Benson, S., Dutton, P. H., Bailey, H., Kappes, M. A., Kuhn, C. E., Weise, M. J., Mate, B., Shaffer, S. A., Hassrick, J. L., Henry, R. W., Irvine, L. ... Costa, D. P. (2013). Cumulative human impacts on marine predators. Nature Communications, 4, Article 2688 . https://doi.org/10.1038/ncomms3688

Raghavan, M., DeGiorgio, M., Albrechtsen, A., Moltke, I., Skoglund, P., Korneliussen, T. S., Grønnow, B., Appelt, M., Gulløv, H. C., Friesen, T. M., Fitzhugh, W., Malmström, H., Rasmussen, S., Olsen, J., Melchior, L., Fuller, B. T., Fahrni, S. M., Stafford, T., Grimes, V. ... Willerslev, E. (2014). The genetic prehistory of the New World Arctic. Science, 345(6200), Article 1255832. https://doi.org/10.1126/science.1255832

Wang, T., Lefevre, S., Iversen, N. K., Findorf, I., Buchanan, R. & McKenzie, D. (2014). Anaemia only causes a small reduction in the upper critical temperature of sea bass: is oxtgen delivery the limiting factor for tolerance of acute warming in fishes? Journal of Experimental Biology, 217, 4275-4278. https://doi.org/10.1242/jeb.104166

Schwensen, J. F., Menné, T., Veien, N. K., Funding, A. T., Avnstorp, C., Østerballe, M., Andersen, K. E., Paulsen, E., Mørtz, C. G., Sommerlund, M., Danielsen, A., Andersen, B. L., Thormann, J., Kristensen, O., Kristensen, B., Vissing, S., Nielsen, N. H., Thyssen, J. P. & Johansen, J. D. (2014). Occupational contact dermatitis in blue-collar workers: results from a multicentre study from the Danish Contact Dermatitis Group (2003-2012). Contact Dermatitis, 71(6), 348-55. https://doi.org/10.1111/cod.12277

Mørck, T. A., Erdmann, S. E., Long, M., Mathiesen, L., Nielsen, F., Siersma, V. D., Bonefeld-Jørgensen, E. C. & Knudsen, L. E. (2014). PCB concentrations and dioxin-like activity in blood samples from Danish school children and their mothers living in urban and rural areas. Basic & Clinical Pharmacology & Toxicology, 115(1), 134-44. https://doi.org/10.1111/bcpt.12214

Juul-Pedersen, T., Arendt, K., Mortensen, J., Blicher, M., Schrøder, D. S. & Rysgaard, S. (2015). Seasonal and interannual phytoplankton production in a sub-arctic fjord (Godthåbsfjord) connected to the Greenland Ice Sheet. Marine Ecology Progress Series, 524, 27-38. https://doi.org/10.3354/meps11174

Long, M., Strand, J., Lassen, P., Krüger, T., Dahllöf, I., Bossi, R., Larsen, M. M., Wiberg-Larsen, P. & Bonefeld-Jørgensen, E. C. (2014). Endocrine-disrupting effects of compounds in Danish streams. Archives of Environmental Contamination and Toxicology, 66(1), 1-18. https://doi.org/10.1007/s00244-013-9959-4

Ringbom, Å., Lindroos, A., Heinemeier, J. & Sonck-Koota, P. (2014). 19 years of mortar dating: Learning from experience. Radiocarbon: An International Journal of Cosmogenic Isotope Research, 56(2), 619-635. https://doi.org/10.2458/56.17469

Mortensen, J., Bendtsen, J., Lennert, K. & Rysgaard, S. (2014). Seasonal variability of the circulation system in a West Greenland tidewater outlet glacier fjord, Godthåbsfjord (64°N). Journal of Geophysical Research: Earth Surface, 119(12), 2591-2603. https://doi.org/10.1002/2014JF003267

Wilkinson, B. T. (2014). Amortized bounds for dynamic orthogonal range reporting. In A. S. Schulz & D. Wagner (Eds.), Algorithms - ESA 2014: 22th Annual European Symposium, Wroclaw, Poland, September 8-10, 2014. Proceedings (pp. 842-856). Springer. https://doi.org/10.1007/978-3-662-44777-2_69

Heinemeier, J. & Philippsen, B. (2014). Atomer afslører nyt om os og vores fortid. In K. R. Kjaer (Ed.), 25 søforklaringer: Naturvidenskabelige fortællinger fra Søauditorierne (pp. 222-235). Aarhus Universitetsforlag.

Wilkinson, B. T. (2015). Revisiting visibility in the plane. Paper presented at International Symposium on Computational Geometry, Eindhoven, Netherlands. http://www.madalgo.au.dk/~bw/papers/2015W.pdf

Klein, M., Heinemeier, J., Gottdang, A., Mous, D. J. W. & Olsen, J. (2014). Extension of the HVE 1 MV multi-element AMS system for low background. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, 331, 204-208. https://doi.org/10.1016/j.nimb.2013.11.036

Rieboldt, F., Helveg, S., Bechstein, R., Lammich, L., Besenbacher, F., Lauritsen, J. V. & Wendt, S. (2014). Formation and sintering of Pt nanopartictes on vicinal rutile TiO₂ surfaces. Physical Chemistry Chemical Physics, 16(39), 21289-21299. https://doi.org/10.1039/c4cp02716g

Pertoldi, C., Elschot, K., Ruiz-Gonzalez, A., van de Zande, L., Zalewski, A., Munoz, J., Madsen, A. B., Loeschcke, V., Groot, A. & Bijlsma, R. (2014). Genetic variability of central-western European pine marten (Martes martes) populations. Acta Theriologica, 59(4), 503-510. https://doi.org/10.1007/s13364-014-0196-7

Bauerfeind, S. S., Kellermann, V., Nasiri Moghadam, N., Loeschcke, V. & Fischer, K. (2014). Temperature and photoperiod affect stress resistance traits in Drosophila melanogaster. Physiological Entomology, 39(3), 237-246. https://doi.org/10.1111/phen.12068

Diemer, P., Markoew, S., Le, D. Q. S. & Qvist, N. (2015). Poly-ε-caprolactone mesh as a scaffold for in vivo tissue engineering in rabbit esophagus. Diseases of the Esophagus (Online), 28(3), 240-245. https://doi.org/10.1111/dote.12172

Bjælde, O. E., Pedersen, M. K. & Sherson, J. (2014). Gamification of Quantum Mechanics Teaching. In Proceedings of World Conference on E-learning in Corporate, Governement, Healthcare, and Higher Education 2014 (pp. 218-222). EdITLib. http://www.editlib.org/p/148966/

Metcalfe, T. S., Creevey, O. L., Dogan, G., Mathur, S., Xu, H., Bedding, T. R., Chaplin, W. J., Christensen-Dalsgaard, J., Karoff, C., Trampedach, R., Benomar, O., Brown, B. P., Buzasi, D. L., Campante, T. L., Çelik, Z., Cunha, M. S., Davies, G. R., Deheuvels, S., Derekas, A. ... White, T. R. (2014). Properties of 42 solar-type Kepler targets from the asteroseismic modeling portal. Astrophysical Journal Supplement Series, 214(2), Article 27. https://doi.org/10.1088/0067-0049/214/2/27

Cantiello, M., Mankovich, C., Bildsten, L., Christensen-Dalsgaard, J. & Paxton, B. (2014). Angular momentum transport within evolved low-mass stars. Astrophysical Journal, 788(1), Article 93. https://doi.org/10.1088/0004-637X/788/1/93

Juul-Pedersen, T., Arendt, K., Mortensen, J., Krawczyk, D., Rysgaard, S., Retzel, A., Nygaard, R., Burmeister, A., Krause-Jensen, D., Marbá, N., Olesen, B., Sejr, M. K., Blicher, M., Meire, L., Geertz-Hansen, O., Labansen, A., Boye, T. & Simon, M. (2013). Nuuk Basic - The Marine Basis program. In NERO - Nuuk Ecological Research Operations, 7th annual report 2014 (pp. 46-68). Aarhus University, DCE - Danish Centre for Environment and Energy.

Rauer, H., Catala, C., Aerts, C., Appourchaux, T., Benz, W., Brandeker, A., Christensen-Dalsgaard, J., Deleuil, M., Gizon, L., Goupil, M. J., Güdel, M., Janot-Pacheco, E., Mas-Hesse, M., Pagano, I., Piotto, G., Pollacco, D., Santos, C., Smith, A., Suárez, J. C. ... Zwintz, K. (2014). The PLATO 2.0 mission. Experimental Astronomy, 38(1-2), 249-300. https://doi.org/10.1007/s10686-014-9383-4

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