Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Euclid Collaboration (2024). Euclid preparation: LIII. LensMC, weak lensing cosmic shear measurement with forward modelling and Markov Chain Monte Carlo sampling. Astronomy and Astrophysics, 691, Article A319. https://doi.org/10.1051/0004-6361/202450617

Zdouc, M. M., Blin, K., Louwen, N. L. L., Navarro, J., Loureiro, C., Bader, C. D., Bailey, C. B., Barra, L., Booth, T. J., Bozhüyük, K. A. J., Cediel-Becerra, J. D. D., Charlop-Powers, Z., Chevrette, M. G., Chooi, Y. H., D'Agostino, P. M., de Rond, T., Del Pup, E., Duncan, K. R., Gu, W. ... Medema, M. H. (2025). MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration. Nucleic Acids Research, 53(D1), D678-D690. https://doi.org/10.1093/nar/gkae1115

Pedersen, E. M., Wimberley, T. & Vilhjálmsson, B. J. (2024). A cautionary tale for Alzheimer’s disease GWAS by proxy: Genetic epidemiology. Nature Genetics, 56(12), 2590-2591. Article 99. https://doi.org/10.1038/s41588-024-02023-y

Farwig, N., Sprenger, P. P., Baur, B., Böhning-Gaese, K., Brandt, A., Eisenhauer, N., Ellwanger, G., Hochkirch, A., Karamanlidis, A. A., Mehring, M., Pusch, M., Rehling, F., Sommerwerk, N., Spatz, T., Svenning, J. C., Tischew, S., Tockner, K., Tscharntke, T., Vadrot, A. B. M. ... Mosbrugger, V. (2025). Identifying Major Factors for Success and Failure of Conservation Programs in Europe. Environmental Management, 75(3), 425-443. Article 12306. https://doi.org/10.1007/s00267-024-02086-x

Panyella Pedersen, S., Bruun, G. & Pohl, T. (2024). Green's function approach to interacting lattice polaritons and optical nonlinearities in subwavelength arrays of quantum emitters. Physical Review Research , 6(4), Article 043264. https://doi.org/10.1103/PhysRevResearch.6.043264

Randi, P. A. S., Kumar, S., Souza Barbosa, A., Akther, U. S., Jones, N. C., Hoffmann, S. V., Bettega, M. H. F. & Limao-Vieira, P. (2025). The electronic states of 2-chlorotoluene in the 4.0–10.8 eV photon energy range. Journal of Molecular Structure, 1326, Article 141045. https://doi.org/10.1016/j.molstruc.2024.141045

Mendoza-Suárez, M., Akyol, T. Y., Nadzieja, M. & Andersen, S. U. (2024). Increased diversity of beneficial rhizobia enhances faba bean growth. Nature Communications, 15(1), Article 10673. https://doi.org/10.1038/s41467-024-54940-5

Garde, E., Ditlevsen, S., Olsen, J. & Heide-Jørgensen, M. P. (2024). A radiocarbon bomb pulse model for estimating the age of North Atlantic cetaceans. Biology Letters, 20(11). https://doi.org/10.1098/rsbl.2024.0350

Rasmussen, M. H., Bregnhøj, M., Kreitschitz, A., Gorb, S. N. & Weidner, T. (2025). Adhesion of the mucilage envelope of Ocimum basilicum seeds probed by sum frequency generation spectroscopy. Soft Matter, 21(6), 1037-1044. https://doi.org/10.1039/d4sm01057d

Andrade, V., Casas, A., Balslev, H. & Mora, F. (2024). The role of wild palms in agroforestry systems in the Neotropics: A review. People and Nature, 6(6), 2200-2227. https://doi.org/10.1002/pan3.10741

Davison, C. W., Rahbek, C. & Morueta-Holme, N. (2024). Changes in Danish bird communities over four decades of climate and land-use change. Oikos, 2024(12), Article e10697. https://doi.org/10.1111/oik.10697

Murolo, C., du Plessis, A. & Trotman, D. J. A. (2024). On the smooth Whitney fibering conjecture. Journal of the London Mathematical Society, 110(6), Article e70021. https://doi.org/10.1112/jlms.70021

Guillaume, C., Buldgen, G., Amarsi, A. M., Dupret, M. A., Lundkvist, M. S., Larsen, J. R., Scuflaire, R. & Noels, A. (2024). The age of the Methuselah star in the light of stellar evolution models with tailored abundances. Astronomy and Astrophysics, 692, Article L3. https://doi.org/10.1051/0004-6361/202451782

Wu, G., Rouvière, J. O., Schmid, M. & Heick Jensen, T. (2024). RNA 3′end tailing safeguards cells against products of pervasive transcription termination. Nature Communications, 15(1), Article 10446. https://doi.org/10.1038/s41467-024-54834-6

Davidson, L., Rouvière, J. O., Sousa-Luís, R., Nojima, T., Proudfoot, N. J., Jensen, T. H. & West, S. (2024). DNA-directed termination of mammalian RNA polymerase II. Genes and Development, 38(21-24), 998-1019. https://doi.org/10.1101/gad.351978.124

Out, W., García-Granero, J. J., Andreasen, M. H., Patús, C. N., Kirleis, W., Barfod, G. H. & Andersen, N. H. (2025). Plant use at Funnel Beaker sites: combined macro- and microremains analysis at the Early Neolithic site of Frydenlund, Denmark (ca. 3600 bce). Vegetation History and Archaeobotany, 34(2), 177–203. Article 108391. https://doi.org/10.1007/s00334-024-01020-9

Koganti, T., De Smedt, P., Farzamian, M., Knadel, M., Triantafilis, J., Christiansen, A. V. & Greve, M. H. (2024). Editorial: Digital soil mapping using electromagnetic sensors. Frontiers in Soil Science, 4, Article 1536797. https://doi.org/10.3389/fsoil.2024.1536797

Lapham, L. L., Lloyd, K. G., Fossing, H., Flury, S., Jensen, J. B., Alperin, M. J., Rehder, G., Holzhueter, W., Ferdelman, T. & Jørgensen, B. B. (2024). Methane leakage through the sulfate–methane transition zone of the Baltic seabed. Nature Geoscience, 17(12), 1277-1283. https://doi.org/10.1038/s41561-024-01594-z

Rasmussen, A. P., Klinkby, N., Lauridsen, A. G. S. & Andersen, L. H. (2024). Vibrationally resolved gas-phase electronic spectrum of cryogenic protonated pentacenequinone. Physical Review A, 110(6), Article 062801. https://doi.org/10.1103/PhysRevA.110.062801

Juul-Kristensen, T., Thiesen, C., Haurum, L. W., Keller-Socin, J. G., Lendamba, R. W., Zoleko Manego, R., Betouke, M. E., Knudsen, B. R., Pareja, E., Pareja-Tobes, E., Labouriau, R., Ghyslain, M.-N. & Tesauro, C. (2024). Non-Invasive Malaria Detection in Sub-Saharan Africa Using a DNA-Based Sensor System. Sensors, 24(24), Article 7947. https://doi.org/10.3390/s24247947

Jespersen, S. N. (2025). Isotropic sampling of tensor-encoded diffusion MRI. Magnetic Resonance in Medicine, 93(5), 2040-2048. https://doi.org/10.1002/mrm.30404

Paludan, S. R., Pradeu, T., Pichlmair, A., Wray, K. B., Mikkelsen, J. G., Olagnier, D. P. C. & Mogensen, T. H. (2024). Early host defense against virus infections. Cell Reports, 43(12), Article 115070. https://doi.org/10.1016/j.celrep.2024.115070

Cavaletto, S. M., Kowalczyk, K. M., Navarrete, F. & Rivera-Dean, J. (2025). The attoscience of strong-field-driven solids. Nature Reviews Physics, 7(1), 38-49. Article 2070. https://doi.org/10.1038/s42254-024-00784-3

Klinkby, N., Rasmussen, A. P., Lauridsen, A. G. S. & Andersen, L. H. (2025). Absorption and Excited-State Coherences of Cryogenically Cold Retinal Protonated Schiff Base in Vacuo. ChemPhysChem, 26(3), Article e202400878. https://doi.org/10.1002/cphc.202400878

Christensen, S. (2024). Documentation of Edcrop – version 1: A Python package to simulate field-scale evapotranspiration and drainage from crop, wetland, or forest . AU Library Scholarly Publishing Services. https://doi.org/10.7146/aul.539

Manolaki, P., Wu, N., Mattesen, E., Pastor, A. & Riis, T. (2024). Benthic diatom communities in high-Arctic streams across a water chemistry gradient in Zackenberg Valley, Northeast Greenland. Polar Biology, 47(12), 1559-1574. https://doi.org/10.1007/s00300-024-03317-x

Gouveia, G., Saateh, A., Swietlikowska, A., Scarpellini, C., Tsang, E., Altug, H., Merkx, M., Dillen, A., Leirs, K., Spasic, D., Lammertyn, J., Gothelf, K. V., Bonedeau, E., Porzberg, N., Smeets, R. L., Koenen, H. J. P. M., Prins, M. W. J. & de Jonge, M. I. (2025). Continuous Biosensing to Monitor Acute Systemic Inflammation, a Diagnostic Need for Therapeutic Guidance. ACS Sensors, 10(1), 4-14. https://doi.org/10.1021/acssensors.4c02569

Hansen, R. A. & Gothelf, K. V. (2023). Controlling Single Molecule Conjugated Oligomers and Polymers with DNA. In Visions of DNA Nanotechnology at 40 for the Next 40: A Tribute to Nadrian C. Seeman (pp. 87-105). Springer Science and Business Media Deutschland GmbH. https://doi.org/10.1007/978-981-19-9891-1_7

Griffiths, M. P., Grombacher, D., Mashhadi, S. R. & Larsen, J. J. (2024). Ground-Truth Validation of T₂ Estimates From Steady-State Surface NMR. Geophysical Research Letters, 51(24), Article e2024GL112094. https://doi.org/10.1029/2024GL112094

Chundury, P., Thakkar, U., Reyazuddin, Y., Jordan, J. B., Elmqvist, N. & Lazar, J. (2024). Understanding the Visualization and Analytics Needs of Blind and Low-Vision Professionals. In ASSETS 2024 - Proceedings of the 26th International ACM SIGACCESS Conference on Computers and Accessibility Article 111 Association for Computing Machinery. https://doi.org/10.1145/3663548.3688496

Toft Lindkvist, T., Djavani-Tabrizi, I., Chen, L. & Brøndsted Nielsen, S. (2024). Freezing Conformers for Gas-Phase Förster Resonance Energy Transfer. ChemPlusChem, 89(12), Article e202400448. https://doi.org/10.1002/cplu.202400448

Larsen-Ledet, K., Boderskov, T., Olesen, B., Larsen, M. M., Rimi Christiansen, E., Nielsen, L. H., De Clerck, O. & Bruhn, A. (2025). Strain selection and temperature responses of Ulva and Ulvaria (Chlorophyta) for application in land-based cultivation systems. Algal Research, 85, Article 103858. https://doi.org/10.1016/j.algal.2024.103858

Hansen, J. W., Bruhn, A., Buur, H., Carstensen, J., Dahl, K., Elmegaard, S. L., Galatius, A., Göke, C., Griffiths, E. T., Hansen, J. L. S., Høgslund, S., Krause-Jensen, D., Ladegaard, M., Markager, S., Mohn, C., Nielsen, R. D., Petersen, I. K., Sterup, J., Strand, J. ... Tougaard, J. (2024). MARINE OMRÅDER 2023: NOVANA. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE - Nationalt Center for Miljø og Energi No. 632 https://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/Videnskabelige_rapporter_600-699/SR632.pdf

Atkinson, J. & Freudenberger, D. (2024). Young woodland restoration plantings can be resilient to uncontrolled bushfires. Ecological Management and Restoration, 25(3), 177-181. https://doi.org/10.1111/emr.12616

Fu, L., Llacsahuanga Allcca, A. E. & Chen, Y. P. (2024). Coexisting Ferromagnetic-Antiferromagnetic State and Giant Anomalous Hall Effect in Chemical Vapor Deposition-Grown 2D Cr₅Te₈. ACS Nano, 18(49), 33381-33389. https://doi.org/10.1021/acsnano.4c08700

Thøgersen, M. R. & Kjeldsen, R. J. F. (2024). Echolocation as an Accessible Navigation Tool in a Virtual 3D Environment. In ASSETS 2024 - Proceedings of the 26th International ACM SIGACCESS Conference on Computers and Accessibility Article 132 Association for Computing Machinery, Inc.. https://doi.org/10.1145/3663548.3688547

Jiang, Y., Kleinau, J., Eckroth, T. M., Hoggan, E., Mueller, S. & Wessely, M. (2024). Demonstration of MouthIO: Customizable Oral User Interfaces with Integrated Sensing and Actuation. In UIST Adjunct 2024 - Proceedings of the 37th Annual ACM Symposium on User Interface Software and Technology Article 17 Association for Computing Machinery, Inc.. https://doi.org/10.1145/3672539.3686758

Zhu, Y., Honnet, C., Kang, Y., Zhu, J., Zheng, A. J., Heinz, K., Tang, G., Musk, L., Wessely, M. & Mueller, S. (2024). Demo of PortaChrome: A Portable Contact Light Source for Integrated Re-Programmable Multi-Color Textures. In UIST Adjunct 2024 - Proceedings of the 37th Annual ACM Symposium on User Interface Software and Technology Article 18 Association for Computing Machinery, Inc.. https://doi.org/10.1145/3672539.3686774

Anderson, J. P., Contreras, C., Stritzinger, M. D., Hamuy, M., Phillips, M. M., Suntzeff, N. B., Morrell, N., González-Gaitán, S., Gutiérrez, C. P., Burns, C. R., Hsiao, E. Y., Anais, J., Ashall, C., Baltay, C., Baron, E., Bersten, M., Busta, L., Castellón, S., De Jaeger, T. ... Uddin, S. (2024). Optical and near-infrared photometry of 94 type II supernovae from the Carnegie Supernova Project. Astronomy and Astrophysics, 692, Article A95. https://doi.org/10.1051/0004-6361/202244401

Richter, F., Saalmann, U., Allaria, E., Wollenhaupt, M., Ardini, B., Brynes, A., Callegari, C., Cerullo, G., Danailov, M., Demidovich, A., Dulitz, K., Feifel, R., Fraia, M. D., Ganeshamandiram, S. D., Giannessi, L., Gölz, N., Hartweg, S., von Issendorff, B., Laarmann, T. ... Bruder, L. (2024). Strong-field quantum control in the extreme ultraviolet domain using pulse shaping. Nature, 636(8042), 337-341. Article 13512. https://doi.org/10.1038/s41586-024-08209-y

Hähn, G. J. A., Damasceno, G., Alvarez-Davila, E., Aubin, I., Bauters, M., Bergmeier, E., Biurrun, I., Bjorkman, A. D., Bonari, G., Botta-Dukát, Z., Campos, J. A., Čarni, A., Chytrý, M., Ćušterevska, R., de Gasper, A. L., De Sanctis, M., Dengler, J., Dolezal, J., El-Sheikh, M. A. ... Bruelheide, H. (2025). Global decoupling of functional and phylogenetic diversity in plant communities. Nature Ecology and Evolution, 9(2), 237-248. Article e12976. https://doi.org/10.1038/s41559-024-02589-0

Thorup, V. M., Foldager, L., Pastell, M., Frandsen, M., Jensen, B. B. & Krogh, M. A. (2024). Prediction of mortality in recirculation aquaculture systems. Poster session presented at AQUA Conference 2025, Copenhagen, Denmark.

Lustermans, J. J. M., Sereika, M., Burdorf, L. D. W., Albertsen, M., Schramm, A. & Marshall, I. P. G. (2025). Extracellular electron transfer genes expressed by candidate flocking bacteria in cable bacteria sediment. mSystems, 10(1). https://doi.org/10.1128/msystems.01259-24

Schmidt, N. M., Barrio, I. C., Kristensen, J. A., López-Blanco, E. & van Beest, F. M. (2024). Highlighting the role of biota in feedback loops from tundra ecosystems to the atmosphere. Frontiers in Environmental Science, 12, Article 1491604. https://doi.org/10.3389/fenvs.2024.1491604

Radak, Z. & Rattan, S. I. S. (2025). Exercise, hormesis and ageing: a new section in Biogerontology. Biogerontology, 26(1), 26. Article 26. https://doi.org/10.1007/s10522-024-10170-2

Ciftyurek, E., Li, Z. & Schierbaum, K. (2024). Engineered Porosity ZnO Sensor Enriched with Oxygen Vacancies Enabled Extraordinary Sub-ppm Sensing of Hydrogen Sulfide and Nitrogen Dioxide Air Pollution Gases at Low Temperature in Air. Sensors, 24(23), Article 7694. https://doi.org/10.3390/s24237694

Czajewski, I., Swain, B., Xu, J., McDowall, L., Ferenbach, A. T. & van Aalten, D. M. F. (2024). Rescuable sleep and synaptogenesis phenotypes in a Drosophila model of O-GlcNAc transferase intellectual disability. eLife, 13. https://doi.org/10.7554/eLife.90376

Vara-Vela, A. L., Rojas Benavente, N., Nielsen, O. K., Nascimento, J. P., Alves, R., Gavidia-Calderon, M. & Karoff, C. (2024). Quantifying Methane Emissions Using Satellite Data: Application of the Integrated Methane Inversion (IMI) Model to Assess Danish Emissions. Remote Sensing, 16(23), Article 4554. https://doi.org/10.3390/rs16234554

Czarnocka-Cieciura, A., Poznański, J., Turtola, M., Tomecki, R., Krawczyk, P. S., Mroczek, S., Orzeł, W., Saha, U., Jensen, T. H., Dziembowski, A. & Tudek, A. (2024). Modeling of mRNA deadenylation rates reveal a complex relationship between mRNA deadenylation and decay. EMBO Journal, 43(24), 6525-6554. Article e1737. https://doi.org/10.1038/s44318-024-00258-3

Gutiérrez, C. P., Mattila, S., Lundqvist, P., Dessart, L., González-Gaitán, S., Jonker, P. G., Dong, S., Coppejans, D., Chen, P., Charalampopoulos, P., Elias-Rosa, N., Reynolds, T. M., Kochanek, C., Fraser, M., Pastorello, A., Gromadzki, M., Neustadt, J., Benetti, S., Kankare, E. ... Wyrzykowski, Ł. (2024). CSS 161010: A Luminous Fast Blue Optical Transient with Broad Blueshifted Hydrogen Lines. Astrophysical Journal, 977(2), Article 162. https://doi.org/10.3847/1538-4357/ad89a5

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