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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Swann, A. F. & Dancer, A. (2017). Hypertoric Manifolds and HyperKähler Moment Maps. In S. Chiossi, A. Fino, E. Musso, F. Podestà & L. Vezzoni (Eds.), Special Metrics and Group Actions in Geometry (pp. 107-127). Springer. https://doi.org/10.1007/978-3-319-67519-0_5

Nguyen, D. D., Jones, N. C., Hoffmann, S. V. & Spanget-Larsen, J. (2018). Vacuum UV Polarization Spectroscopy of p-Terphenyl. The Journal of Physical Chemistry A, 122(1), 184-191. https://doi.org/10.1021/acs.jpca.7b10442

Andersen, J. E. & Malusà, A. (2017). The AJ-conjecture for the Teichmüller TQFT. ArXiv.

Khan, A. R., Hansen, B., Wiborg, O., Kroenke, C. D. & Jespersen, S. (2018). Diffusion MRI and MR spectroscopy reveal microstructural and metabolic brain alterations in chronic mild stress exposed rats: A CMS recovery study. NeuroImage, 167, 342-353. https://doi.org/10.1016/j.neuroimage.2017.11.053

Mirhosseini, M., Rezania, A., Blichfeld, A. B., Iversen, B. B. & Rosendahl, L. A. (2017). Experimental Investigation of Zinc Antimonide Thin Film Thermoelectric Element over Wide Range of Operating Conditions. Physica Status Solidi (A) Applications and Materials Science, 214(11), 1-7. Article 1700301. https://doi.org/10.1002/pssa.201700301

Städler, B. & Zelikin, A. N. (2017). Enzyme prodrug therapies and therapeutic enzymes. Advanced Drug Delivery Reviews, 118(9). https://doi.org/10.1016/j.addr.2017.10.006

Barnagaud, J.-Y., Gauzere, P., Zuckerberg, B., Prince, K. & Svenning, J.-C. (2017). Temporal changes in bird functional diversity across the United States. Oecologia, 185(4), 737-748. https://doi.org/10.1007/s00442-017-3967-4

Zhou, L., Zhou, Y., Hu, Y., Cai, J., Bai, C., Shao, K., Gao, G., Zhang, Y., Jeppesen, E. & Tang, X. (2017). Hydraulic connectivity and evaporation control the water quality and sources of chromophoric dissolved organic matter in Lake Bosten in arid northwest China. Chemosphere, 188, 608-617. https://doi.org/10.1016/j.chemosphere.2017.09.006

Zhuang, G.-C., Lin, Y.-S., Bowles, M. W., Heuer, V. B., Lever, M. A., Elvert, M. & Hinrichs, K.-U. (2017). Distribution and isotopic composition of trimethylamine, dimethylsulfide and dimethylsulfoniopropionate in marine sediments. Marine Chemistry, 196, 35-46. https://doi.org/10.1016/j.marchem.2017.07.007

Petersen, K. D. & Clausen, O. R. (2017). Controlling the production-induced subsidence of installations.

Larsen, F., Jensen, N., Autzen, J. K., Kongsfelt, I. B. & Pedersen, L. (2017). Primary Brain Calcification Causal PiT2 Transport-Knockout Variants can Exert Dominant Negative Effects on Wild-Type PiT2 Transport Function in Mammalian Cells. Journal of Molecular Neuroscience, 61(2), 215-220. https://doi.org/10.1007/s12031-016-0868-7

Levis, C., Costa, F. R. C., Bongers, F., Pena-Claros, M., Clement, C. R., Junqueira, A. B., Neves, E. G., Tamanaha, E. K., Figueiredo, F. O. G., Salomao, R. P., Castilho, C. V., Magnusson, W. E., Phillips, O. L., Guevara, J. E., Sabatier, D., Molino, J. .-F., Lopez, D. C., Mendoza, A. M., Pitman, N. C. A. ... ter Steege, H. (2017). Persistent effects of pre-Columbian plant domestication on Amazonian forest composition. Science, 355(6328), 925-931. https://doi.org/10.1126/science.aal0157

Knudsen, E. B., Willendrup, P. K., Garde, J., Jørgensen, M. R. V. & Kantor, I. (2017). McXtrace 1.4: latest developments in the new release. In Advances in Computational Methods for X-Ray Optics IV : Proceedings Volume 10388 (Vol. 1038809). Article 1038809 SPIE - International Society for Optical Engineering. https://doi.org/10.1117/12.2274416

Okholm, T. L. H., Nielsen, M. M., Hamilton, M., Christensen, L.-L., Vang, S., Hedegaard, J., Hansen, T. B., Kjems, J., Dyrskjøt, L. & Pedersen, J. S. (2017). Circular RNA expression is abundant and correlated to aggressiveness in early-stage bladder cancer. npj Genomic Medicine, 2(1), Article 36. https://doi.org/10.1038/s41525-017-0038-z

Aguirre, V. S. (2018). Stellar Evolution and Modelling Stars. Asteroseismology and Exoplanets: Listening to the Stars and Searching for New Worlds, Astrophysics and Space Science Proceedings, 49, 3. https://doi.org/10.1007/978-3-319-59315-9_1

Aarslev, M. J., Christensen-Dalsgaard, J., Lund, M. N., Aguirre, V. S. & Gough, D. (2017). A fitting LEGACY - modelling Kepler's best stars. E P J Web of Conferences, 160, Article 03010. https://doi.org/10.1051/epjconf/201716003010

Mosumgaard, J. R., Silva Aguirre, V., Weiss, A., Christensen-Dalsgaard, J. & Trampedach, R. (2017). Improving 1D Stellar Models with 3D Atmospheres. E P J Web of Conferences, 160, Article 03009. https://doi.org/10.1051/epjconf/201716003009

Huber, D., Zinn, J., Bojsen-Hansen, M., Pinsonneault, M., Sahlholdt, C., Serenelli, A., Silva Aguirre, V., Stassun, K., Stello, D., Tayar, J., Bastien, F., Bedding, T. R., Buchhave, L. A., Chaplin, W. J., Davies, G. R., García, R. A., Latham, D. W., Mathur, S., Mosser, B. & Sharma, S. (2017). Asteroseismology and Gaia: Testing Scaling Relations Using 2200 Kepler Stars with TGAS Parallaxes. The Astrophysical Journal, 844(2), 102. Article 102. https://doi.org/10.3847/1538-4357/aa75ca

Damgaard-Møller, E., Overgaard, J., Chilton, N., Walsh, J., Stunault, A., Fabelo, O., Hathwar, V. R. & Thomsen, M. (2017). Spin density measurement of water-bridged Co-dimer using polarized neutrons. Poster session presented at Danscatt 2017, Odense, Denmark. https://www.sdu.dk/en/om_sdu/institutter_centre/fysik_kemi_og_farmaci/forskning/forskningsgrupper/dorthe_b_ravnsbak/danscatt/conference+material

Davidsson, S., Carlsson, J., Mölling, P., Gashi, N., Andrén, O., Andersson, S.-O., Brzuszkiewicz, E., Poehlein, A., Al-Zeer, M. A., Brinkmann, V., Scavenius, C., Nazipi, S., Söderquist, B. & Brüggemann, H. (2017). Prevalence of Flp Pili-Encoding Plasmids in Cutibacterium acnes Isolates Obtained from Prostatic Tissue. Frontiers in Microbiology, 8(NOV), 2241. Article 2241. https://doi.org/10.3389/fmicb.2017.02241

Merritt, T. R., Nielsen, C. L., Jakobsen, F. L. & Grønbæk, J. E. (2017). GlowPhones: Designing for Proxemics Play with Low-Resolution Displays in Location-based Games. In Proceedings of the Annual Symposium on Computer-Human Interaction in Play: CHI PLAY '17 (pp. 69-81). Association for Computing Machinery. https://doi.org/10.1145/3116595.3116598

Grønbæk, J. E. (2018). Designing for Interaction Proxemics: Configurations and Transitions. In CHI 2018 - Extended Abstracts of the 2018 CHI Conference on Human Factors in Computing Systems: Engage with CHI (Vol. DC08). Article DC08 Association for Computing Machinery. https://doi.org/10.1145/3170427.3173033

Özen, A., Tavşanoğlu, Ü. N., Çakıroğlu, A. İ., Levi, E. E., Jeppesen, E. & Beklioğlu, M. (2018). Patterns of microbial food webs in Mediterranean shallow lakes with contrasting nutrient levels and predation pressures. Hydrobiologia, 806(1), 13–27. https://doi.org/10.1007/s10750-017-3329-6

Blunck, H., Prentow, T. S., Temme, S., Thom, A. & Vahrenhold, J. (2017). Deviation maps for robust and informed indoor positioning services. SIGSPATIAL Special, 9(1), 27-34. https://doi.org/10.1145/3124104.3124110

Salvador-Martínez, I., Coronado-Zamora, M., Castellano, D., Barbadilla, A. & Salazar-Ciudad, I. (2018). Mapping selection within Drosophila melanogaster embryo's anatomy. Molecular Biology and Evolution, 35(1), 66-79. https://doi.org/10.1093/molbev/msx266

Winn, J. N., Petigura, E. A., Morton, T. D., Weiss, L. M., Dai, F., Schlaufman, K. C., Howard, A. W., Isaacson, H., Marcy, G. W., Justesen, A. B. & Albrecht, S. (2017). Constraints on the Obliquities of Kepler Planet-hosting Stars. The Astronomical Journal, 154(6), 270. Article 270. https://doi.org/10.3847/1538-3881/aa93e3

Niraula, P., Redfield, S., Dai, F., Barragán, O., Gandolfi, D., Cauley, P. W., Hirano, T., Korth, J., Smith, A. M. S., Prieto-Arranz, J., Grziwa, S., Fridlund, M., Persson, C. M., Justesen, A. B., Winn, J. N., Albrecht, S., Cochran, W. D., Csizmadia, S., Duvvuri, G. M. ... Van Eylen, V. (2017). Three Super-Earths Transiting the Nearby Star GJ 9827. The Astronomical Journal, 154(6), 266. Article 266. https://doi.org/10.3847/1538-3881/aa957c

Dai, F., Winn, J. N., Gandolfi, D., Wang, S. X., Teske, J. K., Burt, J., Albrecht, S., Barragán, O., Cochran, W. D., Endl, M., Fridlund, M., Hatzes, A. P., Hirano, T., Hirsch, L. A., Johnson, M. C., Justesen, A. B., Livingston, J., Persson, C. M., Prieto-Arranz, J. ... Wittenmyer, R. A. (2017). The Discovery and Mass Measurement of a New Ultra-short-period Planet: EPIC 228732031b. The Astronomical Journal, 154(6), 226. https://doi.org/10.3847/1538-3881/aa9065

Kirillov, S., Dmitrenko, I., Rysgaard, S., Babb, D., Toudal Pedersen, L., Ehn, J., Bendtsen, J. & Barber, D. (2017). Storm-induced water dynamics and thermohaline structure at the tidewater Flade Isblink Glacier outlet to the Wandel Sea (NE Greenland). Ocean Science, 13(6), 947-959. https://doi.org/10.5194/os-13-947-2017

Bianchi, F., Garmash, O., He, X., Yan, C., Iyer, S., Rosendahl, I., Xu, Z., Rissanen, M. P., Riva, M., Taipale, R., Sarnela, N., Petaja, T., Worsnop, D. R., Kulmala, M., Ehn, M. & Junninen, H. (2017). The role of highly oxygenated molecules (HOMs) in determining the composition of ambient ions in the boreal forest. Atmospheric Chemistry and Physics, 17(22), 13819-13831. https://doi.org/10.5194/acp-17-13819-2017

Andersen, P. O., Hansen, L., Vu Quang, H., Kjems, J. & Meyer, R. L. (2017). A Targeting Agent For Drug Delivery To Staphylococcus Aureus Biofilms. 198. Abstract from Eurobiofilms 2017, Amsterdam, Netherlands. http://www.eurobiofilms.com/wp-content/uploads/2016/06/Eurobiofilms2017-Abstract-book.pdf

Michel, E., Dupret, M.-A., Reese, D., Ouazzani, R.-M., Debosscher, J., Hernández, A. G., Belkacem, K., Samadi, R., Salmon, S., Suarez, J. C. & Forteza, S. B. (2017). What CoRoT tells us about δ Scuti stars. Existence of a regular pattern and seismic indices to characterize stars. E P J Web of Conferences, 160, Article 03001. https://doi.org/10.1051/epjconf/201716003001

Trampedach, R. (2017). An opaque Sun? The potential for future, higher opacities to solve the solar abundance problem. E P J Web of Conferences, 160, Article 02005. https://doi.org/10.1051/epjconf/201716002005

Michel, E., Belkacem, K., Samadi, R., Assis Peralta, R. D., Renié, C., Abed, M., Lin, G., Christensen-Dalsgaard, J., Houdek, G., Handberg, R., Gizon, L., Burston, R., Nagashima, K., Pallé, P., Poretti, E., Rainer, M., Mistò, A., Panzera, M. R. & Roth, M. (2017). Promoting access to and use of seismic data in a large scientific community. SpaceInn data handling and archiving. E P J Web of Conferences, 160, 1011. Article 01011. https://doi.org/10.1051/epjconf/201716001011

Lund, M. N., Handberg, R., Kjeldsen, H., Chaplin, W. J. & Christensen-Dalsgaard, J. (2017). Data preparation for asteroseismology with TESS. E P J Web of Conferences, 160, Article 01005. https://doi.org/10.1051/epjconf/201716001005

Salmon, S. J. A. J., Ouazzani, R.-M., Antoci, V., Bedding, T. R. & Murphy, S. J. (2017). The γ Dor stars as revealed by Kepler: A key to reveal deep-layer rotation in A and F stars. E P J Web of Conferences, 152, 5002. https://doi.org/10.1051/epjconf/201715205002

Krebbers, R., Jung, R., Bizjak, A., Jourdan, J.-H., Dreyer, D. & Birkedal, L. (2017). The Essence of Higher-Order Concurrent Separation Logic. In H. Yang (Ed.), Programming Languages and Systems - 26th European Symposium on Programming, ESOP 2017 Held as Part of the European Joint Conferences on Theory and Practice of Software, ETAPS 2017, Proceedings (pp. 696-723). Springer VS. https://doi.org/10.1007/978-3-662-54434-1_26

Bizjak, A. & Birkedal, L. (2018). On Models of Higher-Order Separation Logic. Electronic Notes in Theoretical Computer Science, 336(4), 57-78. https://doi.org/10.1016/j.entcs.2018.03.016

Birkedal, L., Bizjak, A., Clouston, R., Grathwohl, H. B., Spitters, B. & Vezzosi, A. (2019). Guarded Cubical Type Theory. Journal of Automated Reasoning, 63(2), 211-253. https://doi.org/10.1007/s10817-018-9471-7, https://doi.org/10.1007/s10817-018-9471-7

Bizjak, A. & Birkedal, L. (2018). A Model of Guarded Recursion via Generalised Equilogical Spaces. Theoretical Computer Science, 722, 1-18. https://doi.org/10.1016/j.tcs.2018.02.012

Wang, J., Liu, L., Ge, D., Zhang, H., Feng, Y., Zhang, Y., Chen, M. & Dong, MD. (2018). Differential Modulating Effect of MoS2 on Amyloid Peptide Assemblies. Chemistry: A European Journal, 24(14), 3397-3402. https://doi.org/10.1002/chem.201704593

Bauer, A., Gross, J., Lumsdaine, P. L., Shulman, M., Sozeau, M. & Spitters, B. (2017). The HoTT Library: A Formalization of Homotopy Type Theory in Coq. In Y. Bertot & V. Vafeiadis (Eds.), CPP 2017 - Proceedings of the 6th ACM SIGPLAN Conference on Certified Programs and Proofs, co-located with POPL 2017: CPP 2017 (pp. 164-172). Association for Computing Machinery. https://doi.org/10.1145/3018610.3018615

Arge, L., Shin, Y. & Tsirogiannis, C. (2018). Computing Floods Caused by Non-Uniform Sea-Level Rise. In R. Pagh & S. Venkatasubramanian (Eds.), 2018 Proceedings of the 20th Workshop on Algorithm Engineering and Experiments, ALENEX 2018 (pp. 97-108). Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611975055.9

Füchtbauer, W., Yunusov, T., Bozsóki, Z., Gavrin, A., James, E. K., Stougaard, J., Schornack, S. & Radutoiu, S. (2018). LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus. Plant Journal, 93(2), 297-310. https://doi.org/10.1111/tpj.13785

Hede, M. S. & Knudsen, B. R. (2017). The Use of Highly Sensitive Detection Methods for Eradication of Plasmodium. Annals of Clinical Cytology and Pathology , 3(8), Article 1084. https://www.jscimedcentral.com/ClinicalCytology/clinicalcytology-3-1084.pdf

Riede, F. & Borre Pedersen, J. (2018). Late Glacial human dispersals in northern Europe and disequilibrium dynamics. Human Ecology: An Interdisciplinary Journal, 46(5), 621-632. https://doi.org/10.1007/s10745-017-9964-8

Kelly, S., Sullivan, J. T., Kawaharada, Y., Radutoiu, S., Ronson, C. W. & Stougaard, J. (2018). Regulation of Nod factor biosynthesis by alternative NodD proteins at distinct stages of symbiosis provides additional compatibility scrutiny. Environmental Microbiology, 20(1), 97-110. https://doi.org/10.1111/1462-2920.14006

Thorsen, K., Dam, V. S., Kjaer-Sorensen, K., Pedersen, L. N., Skeberdis, V. A., Jurevičius, J., Treinys, R., Petersen, I. M. B. S., Nielsen, M. S., Oxvig, C., Morth, J. P., Matchkov, V. V., Aalkjær, C., Bundgaard, H. & Jensen, H. K. (2017). Loss-of-activity-mutation in the cardiac chloride-bicarbonate exchanger AE3 causes short QT syndrome. Nature Communications, 8(1), Article 1696. https://doi.org/10.1038/s41467-017-01630-0

Mutti, E., Hunger, M., Fedosov, S., Nexo, E. & Kräutler, B. (2017). Organometallic DNA–B₁₂ Conjugates as Potential Oligonucleotide Vectors: Synthesis and Structural and Binding Studies with Human Cobalamin-Transport Proteins. ChemBioChem, 18(22), 2280-2291. https://doi.org/10.1002/cbic.201700472

Taulet, N., Vitre, B., Anguille, C., Douanier, A., Rocancourt, M., Taschner, M., Lorentzen, E., Echard, A. & Delaval, B. (2017). IFT proteins spatially control the geometry of cleavage furrow ingression and lumen positioning. Nature Communications, 8(1), Article 1928. https://doi.org/10.1038/s41467-017-01479-3

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Anne Kirstine Mehlsen