Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Lassen, K. B. (2007). Converting Workflow Nets to BPEL 1.1 in ProM: This is a conversion plugin for the process mining framework ProM.. Computer programme .

Lassen, K. B. (2006). Progress Report: From Real World Problems to Implementation Using Coloured Petri Nets and Translations Between Workflow Languages. Datalogisk Institut, Aarhus Universitet.

Thomsen, K. & Manuilov, V. (2006). The group of unital C*-extensions. In B. Bojarski, A. Mishchenko & A. Weber (Eds.), C*-algebras and Elliptic Theory (pp. 151-156). Birkhäuser Verlag.

Lassen, K. B., van Dongen, B. & van der Aalst, W. M. P. (2007). Translating Message Sequence Charts to other Process Languages using Process Mining. (207 ed.) (pp. 1-15). Eindhoven Technical University.

Kramp, G., Kristensen, M. & Pedersen, J. F. (2007). Physical and Digital Design of the BlueBio Biomonitoring System Prototype, to be used in Emergency Medical Response. In Proceedings on 1st International Conference on Pervasive Computing Technologies for Healthcare 2006 IEEE.

Kyng, M., Kristensen, M. & Christensen, E. F. (2007). Wireless Distribution and Use of Bio-sensor Data. Prehospital and Disaster Medicine, (2).

Fukuda, K., Jensen, A. N., Lauritzen, N. & Thomas, R. (2007). The generic Gröbner walk. Journal of Symbolic Computation, 42, 298-312. https://doi.org/10.1016/j.jsc.2006.09.004

Nielsen, M. & Krukow, K. (2007). Trust Structures. International Journal of Information Security, 6(2-3), 153-181.

Nielsen, M., Krukow, K. & Sassone, V. (2007). A Bayesian Model for Event-based Trust. Electronic Notes in Theoretical Computer Science, 172, 499-521. https://doi.org/10.1016/j.entcs.2007.02.017

Addison, W. N., Azari, F., Sørensen, E. S., Kaartinen, M. T. & McKee, M. D. (2007). Pyrophosphate inhibits mineralization of osteoblast cultures by binding to mineral, upregulating osteopontin and inhibiting alkaline phosphatase actvity. Journal of Biological Chemistry, 282, 15872-15883.

Lizotte, P., Hanford, LE., Enghild, J. J., Nozik-Grayck, E., Giles, BL. & Oury, TD. (2007). Developmental expression of the receptor for advanced glycation end-products (RAGE) and its response to hyperoxia in the neonatal rat lung. B M C Developmental Biology, 7(15).

Britz, D. & Strutwolf, J. (2007). Comparison of flux approximations in electrochemical digital simulation. Journal of Electroanalytical Chemistry, 602, 210-216.

Meyer, M. K. K. & Teglhus, H. (2006). Kunst og naturvidenskab under samme tag: Kollokvium om at udstille kunst og naturvidenskab. Steno Museet, Danmarks Videnskabshistoriske Museum, Århus, 25. september 2006. Nordisk Museologi, (2), 115-119.

Schramm, A., Revsbech, N. P., Dalsgaard, T., Piña-Ochoa, E., de la Torré, J. R., Stahl, D. A. & Risgaard-Petersen, N. (2006). Activity, Microenvironments, and Community Structure of Aerobic and Anaerobic Ammonium Oxidizing Prokaryotes in Estuarine Sediment (Randers Fjord, DK). In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 482). International Society for Microbial Ecology.

Stief, P., Nielsen, L. P., Revsbech, N. P. & Schramm, A. (2006). From the Gut of an Insect to the Global Climate: Denitrification and Nitrous Oxide Production inside Lake Chironomidae. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 171). International Society for Microbial Ecology.

Krieger, B., Schwermer, C. U., Rezakhani, N., Horn, M. A., Gieseke, A., Cytryn, E., Dror, M., van Rijn, J., Drake, H. L. & Schramm, A. (2006). Diversity of Nitrate-Reducing and Denitrifying Bacteria in a Marine Aquaculture Biofilter and their Response to Sulfide. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 270). International Society for Microbial Ecology.

Abildgaard, L., Engberg, R. M., Schramm, A. & Højberg, O. (2006). Quantitative Detection of Clostridium perfringens in Broiler Chickens by Real-Time PCR Targeting the Alpha-Toxin Gene. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 441). International Society for Microbial Ecology.

Schwermer, C. U., Krieger, B., Lavik, G., Schramm, A., van Rijn, J., de Beer, D., Minz, D., Cyctryn, E., Kuypers, M. M. M. & Gieseke, A. (2006). Impact of Sulfide on Nitrate Conversion in Eutrophic Nitrate-Rich Marine Sludge. In The Hidden Powers - Microbial Communities in Action. Proceedings of the 11th International Symposium on Microbial Ecology (ISME-11) (pp. 266). International Society for Microbial Ecology.

Kofoed, M. V., Stief, P., Poulsen, M. & Schramm, A. (2007). In situ detection of denitrifying bacteria by mRNA-targeted nucleic acid probes and catalyzed reporter deposition. Poster session presented at Annual Conference of the Association for General and Applied Microbiology (VAAM), Osnabrück, Germany.

Herrmann, M. & Schramm, A. (2007). Ammonia-oxidizing Bacteria and Archaea in the Rhizosphere of Freshwater Macrophytes. In Biospektrum. Proceedings of the VAAM Annual Meeting (Vol. Special Issue, pp. 60). Pergamon Press.

Nielsen, J. L., Schramm, A., Bernhard, A. E., van den Engh, G. J. & Stahl, D. A. (2004). Flow Cytometry-Assisted Cloning of Specific Sequence Motifs from Complex 16S rRNA Gene Libraries. Appl. Environ. Microbiol., 70(12), 7550–7554. https://doi.org/10.1128/AEM.70.12.7550-7554.2004

Arentoft, T., De Ridder, J., Grundahl, F., Glowienka, L., Waelkens, C., Dupret, M.-A., Grigahcne, A., Lefever, K., Jensen, H. R., Reyniers, M., Frandsen, S. & Kjeldsen, H. (2007). Oscillating blue stragglers, γ Doradus stars and eclipsing binaries in the open cluster NGC 2506. Astronomy & Astrophysics (A&A), 465, 965-979.

Bechsgaard, J. S. (2007). Cause and consequence of self-incompatibility.

Duelund, L., Hazell, A. C. & Toftlund, H. (2007). (1,1,1-Tris{[N-(2-pyridylmethyl)-N-methylamino]-methyl}ethane-κ⁶N)manganese(II) bis(perchlorate). Acta Crystallographica. Section E: Structure Reports Online, 63, 1177-1178.

Ejsing, A. M. & Nielsen, S. B. (2007). Computational study on the negative electron affinities of NO₂^-(H₂O)_n clusters (n = 0 – 30). Journal of Chemical Physics, 126, 154313.

Hvelplund, P., Nielsen, S. B., Panja, S., Poully, J.-C., Støchkel, K. & Liu, B. (2007). Electron capture induced dissociation of peptide ions: Identification of neutral fragments from secondary collisions with cesium vapor. International Journal of Mass Spectrometry, 263, 66-70.

Worm, E. S., Hald Andersen, I., Andersen, J. U., Holm, A. I. S., Hvelplund, P., Kadhane, U., Nielsen, S. B., Poully, J.-C. & Støchkel, K. (2007). Photodissociation of dinucleotide ions in a storage ring. Physical Review A 75, 042709.

Holm, A. I. S., Worm, E. S., Chakraborty, T., Babu, B. R., Wengel, J., Hoffmann, S. V. & Nielsen, S. B. (2007). On the influence of conformational locking of sugar moieties on the absorption and circular dichroism of nucleosides from synchrotron radiation experiments. Journal of Photochemistry and Photobiology, A: Chemistry, 187, 293-298.

Brion, E., Pedersen, L. H. & Mølmer, K. (2007). Implementing a neutral atom Rydberg gate without populating the Rydberg state. J. Phys. B: At. Mol. Opt. Phys., 40, S159-S166.

Tordrup, K. & Mølmer, K. (2007). Quantum-state reconstruction with imperfect rotations on an inhomogeneously broadened ensemble of qubits. Physical Review A, 75(042318).

Nielsen, A. E. B. & Mølmer, K. (2007). Photon number states generated from a continuous-wave light source. Physical Review A, 75, 043801.

Picard, M., Jensen, A.-M. L., Sørensen, T. L.-M., Champeil, P., Møller, J. V. & Nissen, P. (2007). Ca(2+) versus Mg(2+) Coordination at the Nucleotide-binding site of the Sarcoplasmic Reticulum Ca(2+)-ATPase. Journal of Molecular Biology, 368(1), 1-7.

Nilsson, J., Sengupta, J., Gursky, R., Nissen, P. & Frank, J. (2007). Comparison of Fungal 80 S Ribosomes by Cryo-EM Reveals Diversity in Structure and Conformation of rRNA Expansion Segments. Journal of Molecular Biology, 369(2), 429-438.

Taylor, D. J., Nilsson, J., A. Rod, M., Andersen, G. R., Nissen, P. & Frank, J. (2007). Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. E M B O Journal, 26(9), 2421-2431.

Nielsen, K. H. (2006). Naturvidenskabernes kanonisering: Forskere, erkendelser eller kulturarv. Nordisk Museologi, (2), 27-44.

Nielsen, K. H., Kjaer, C. R. & Dahlgaard, J. (2007). Scientists and science communication: A Danish survey. Journal of Science Communication, 6(1).

Sørensen, J., Hamelberg, D., Schiøtt, B. & McCammon, J. A. (2007). Comparative MD analysis of the stability of transthyretin providing insight into the fibrillation mechanism. Biopolymers, 86(1), 73-82. https://doi.org/10.1002/bip.20705

Keiding, S. R. (2007). Intuition og erkendelse.

Keiding, S. R. (2007). Kan Vand Huske.

Stald, L. J. (2007). En interaktiv teaterforestilling. Museumsformidling i Danmark, Nyhedsbrev 16, (16), 18-19.

Hansen, K. R. & Mølmer, K. (2007). Trapping of light pulses in ensembles of stationary Lambda atoms. Physical Review A, 75(053802).

Jansik, B., Høst, S., Jørgensen, P., Olsen, J. & Helgaker, T. (2007). Linear-scaling symmetric square-root decomposition of the overlap matrix. Journal of Chemical Physics, 126, 124104-9.

Friggens, N. & Badsberg, J. H. (2007). The effect of breed and parity on curves of body condition during lactation estimated using a non-linear function. Animal, 1, 565-574. https://doi.org/10.1017/S1751731107691861

Svenning, J.-C. & Skov, F. (2007). Could the tree diversity pattern in Europe be generated by postglacial dispersal limitation. Ecology Letters, 10, 453-460. https://doi.org/10.1111/j.1461-0148.2007.01038

Bladt, J. S. (2007). Reserve selection and indicators of biodiversity complementarity.

Larsen, K. & Bendixen, C. (2007). Sus scrofa synphilin-1 variant 1e (SNCAIP) mRNA, complete cds, alternatively spliced. GenBank Access. No. EF530216. Dataset

Heckmann, A. B., Hebelstrup, K. H., Larsen, K., Micaelo, N. M. & Jensen, E. O. (2007). Myrica gale hemoglobin (Hb) gene, complete cds. (GenBank Access. No. EF405885). Dataset

Arias, C. A. (2007). Enhancements of nutrient removal performance in constructed wetlands for domestic wastewater treatment.

Arias, C. A. & Brix, H. (2006). Vertical flow constructed wetlands show promising results as on-site wastewater treatment systems in rural areas. Abstract from Ferskvandssymposium, Plantebiologi, Aarhus Universitet, Aarhus.

Arias, C. A. & Brix, H. (2006). A two-year study of LECA filter beds systems in Denmark for decentralised wastewater treatment. Abstract from 6th International Workshop on Nutrient Cycling and Retention in Natural and Constructed Wetlands, Trebon, Czech Republic.

Displaying results 9051 to 9100 out of 53660

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Cedhagen, T. (1999). Zoologiska fackuttryck och ordelement.

Jensen, F. B., Fago, A. & Weber, R. E. (1998). 1 Hemoglobin Structure and Function. In Fish Physiology (C ed., pp. 1-40). Elsevier Inc.. https://doi.org/10.1016/S1546-5098(08)60257-5

Pedersen, AK., Wiuf, C. & Christiansen, F. B. (1998). A codon-based model designed to describe lenti-viral evolution. Mol. Biol. Evol., 15, 1069-1081.

Hylleberg, J. (1998). Activities and decisions made during the 8^th TMMP Workshop/Congress. Thailand, 18 August to 3 September, 1997. Phuket Marine Biological Center. Special Publications, 18(1), 196-209.

Christiansen, F. B. & Feldman, M. (1998). Algorithms, genetics and populations: The schemata theorem revisited. Complexity, 3(3), 57-64.

Schierup, M. H., Vekemans, X. & Christiansen, F. B. (1998). Allelic genealogies in sporophytic self-incompatibility systems in plants. Genetics, 150, 1187-1198.

Schierup, M. H., Vekemans, X. & Christiansen, F. B. (1998). Allelic genealogies in sporophytic self-incompatibility systems in plants. Genetics, 150(3), 1187-98.

Lassen, C., Glud, R. N., Ramsing, N. B. & Revsbech, N. P. (1998). A method to improve the spatial resolution of photosynthetic rates obtained by oxygen microsensors. Journal of Phycology, 34(1), 89-93. https://doi.org/10.1046/j.1529-8817.1998.340089.x

Osmon, M. O., Kristensen, J. U., Jacobsen, N. O., Lausten, S. B., Deleuran, B., Deleuran, M., Gesser, B., Matsushima, K., Larsen, C. G. & Jensen, S. L. (1998). A monoclonal anti-interleukin 8 antibody (WS-4) inhibits cytokine response and acute lung injury in experimental severe acute necrotising pancreatitis in rabbits. Gut, 43(2), 232-9.

De Beer, D., Schramm, A., Santegoeds, C. M. & Nielsen, H. K. (1998). Anaerobic processes in activated sludge. Water Science and Technology, 37(4-5), 605-608. https://doi.org/10.1016/S0273-1223(98)00166-8

Baatrup, E. & Bayley, M. (1998). Animal locomotor behaviour as a health biomarker of chemical stress. Archives of Toxicology - Supplement, 20, 163-78.

Cedhagen, T. & Middelfart, P. (1998). Attachment to gastropod veliger shells - a possible mechanism of dispersal in benthic foraminiferans. Phuket Marine Biological Center. Special Publications, 18(1), 117-121.

Cedhagen, T. (1998). Biodiversitetsforskning - en exportprodukt. Flora- och Faunavård 1998, 1-2.

Lorenzen, J., Larsen, L. H., Klær, T. & Revsbech, N. P. (1998). Biosensor determination of the microscale distribution of nitrate, nitrate assimilation, nitrification, and denitrification in a diatom- inhabited freshwater sediment. Applied and Environmental Microbiology, 64(9), 3264-3269. https://doi.org/10.1128/aem.64.9.3264-3269.1998

Mouritsen, KN., Mouritsen, L. T. & Jensen, KT. (1998). Change in topography and sediment characteristics on an intertidal mudflat following mass mortality of the amphipod Corophium volutator L. Journal of the Marine Biological Association of the United Kingdom, 78, 1-14.

Mouritsen, K. N., Mouritsen, L. T. & Jensen, K. T. (1998). Change of topography and sediment characteristics on an intertidal mud-flat following mass-mortality of the amphipod Corophium volutator. Journal of the Marine Biological Association of the United Kingdom, 78, 1167-1180.

Dewilde, S., Winnepenninckx, B., Arndt, M. H., Nascimento, D. G., Santoro, M. M., Knight, M., Miller, A. N., Kerlavage, A. R., Geoghagen, N., Van Marck, E., Liu, L. X., Weber, R. E. & Moens, L. (1998). Characterization of the myoglobin and its coding gene of the mollusc Biomphalaria glabrata. Journal of Biological Chemistry, 273(22), 13583-92.

Aungtonya, C. & Hylleberg, J. (1998). Check list of sublittoral molluscs, with nine new records for the Andaman Sea. Phuket Marine Biological Center. Special Publications, 18(2), 317-332.

Lorenzen, B., Brix, H., Schierup, H.-H. & Madsen, T. V. (1998). Design and performance of the Phyto-Nutri-Tron: a system for controlling the root and shoot environment for whole-plant ecophysiological studies. Environmental and Experimental Botany, 39, 141-157.

Blaaberg, V., Mouritsen, K. N. & Finster, K. (1998). Diel cycles of sulphate reduction in sediments of a Zostera marina-bed. Aquatic Microbial Ecology, 15, 97-102.

Christensen, J. T. (1998). Diet in Littoraria. Hydrobiologia, 378, 235-236.

Valencia, R., Balslev, H., Palacios, W., Neill, D., Josse, C., Tiirado, M. & Skov, F. (1998). Diversity and family composition of trees in different regions of Ecuador: a sample of 18 one-hectare plots. In in F. Dallmeier and J. A. Comiskey (eds.). Forest Biodiversity in North, Central and South America and the Carribean: Research and Monitoring. Man and the Biosphere Series, vol. 21. Unesco and TheParthenon Publishing Group. Carnforth, Lancashire, UK. (pp. 569-584)

Christensen, H. F. & Olesen, J. M. (1998). Ekstremister i Jylland og på Madagascar. Naturens Verden, 11-12, 470-477.

Finster, K., Liesack, W. & Thamdrup, B. (1998). Elemental sulfur and thiosulfate disproportionation by Desulfocapsa sulfoexigens sp. nov., a new anaerobic bacterium isolated from marine surface sediment. Applied and Environmental Microbiology, 64(1), 119-25.

Mario, L., Lund-Hansen, L. C., Christiansen, C. & Matthiesen, H. (1998). Fluff layer studies: Sampling, resuspension and formation of Fe/P particles. Poster session presented at 2nd BASYS Conference, Stockholm, Sweden.

Christiansen, C., Lund-Hansen, L. C., Matthiesen, H. & Laima, M. (1998). "Fluffy" sedimenter er svære at sample. Poster session presented at 10th Danske Havforskermøde, Hirtshals, Denmark.

Kilburn, R. & Hylleberg, J. (1998). Gastropods and bivalves from Thailand; with taxonomical notes and new records. Phuket Marine Biological Center. Special Publications, 18(2), 311-316.

Christiansen, F. B. (1998). gen. In Den Store Danske Encyklopædi (Vol. 7, pp. 348–349). Gyldendal.

Hylleberg, J. (1998). General conclusions: the 8^th TMMP Workshop. Phuket Marine Biological Center. Special Publications, 18(1), 1-9.

Jespersen, D. N., Sorrell, B. K. & Brix, H. (1998). Growth and root oxygen release by Typha latifolia and its effects on sediment methanogenesis. Aquatic Botany, 61, 165-180.

Wells, R. M. G., Baldwin, J., Speed, S. R. & Weber, R. E. (1998). Haemocyanin function in the New Zealand abalones Haliotis iris and H. australis: relationships between oxygen-binding properties, muscle metabolism and habitat. Marine and Freshwater Research, 49, 143-149.

Jensen, F. B., Fago, A. & Weber, R. E. (1998). Haemoglobin structure and function. In S. F. Perry & B. L. Tufts (Eds.), Fish Respiration (pp. 1-40). Academic Press, San Diego.

Fago, A. & Weber, R. E. (1998). Hagfish hemoglobins. In J. M. Jørgensen, J. P. Lomholt & H. Malte (Eds.), The Biology of Hagfishes (pp. 321-333). Chapman & Hall.

Cedhagen, T. (1998). How well-known is the Cephalaspidean fauna (Mollusca: Opisthobranchia) in the Indo-Pacific region? Phuket Marine Biological Center. Special Publications, (17), 341-342.

Brauner, C. J. & Weber, R. E. (1998). Hydrogen ion titrations of the anodic and cathodic haemoglobin components of the European eel Anguilla anguilla. Journal of Experimental Biology, 201(Pt 17), 2507-14.

Schramm, A., De Beer, D., Wagner, M. & Amann, R. (1998). Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor. Applied and Environmental Microbiology, 64(9), 3480-3485.

Dahlgaard, J., Loeschcke, V., Michalak, P. & Justesen, J. (1998). Induced thermotolerance and associated expression of the heat-shock protein Hsp70 in adult Drosophila melanogaster. Functional Ecology, 12(5), 786-793. https://doi.org/10.1046/j.1365-2435.1998.00246.x

de Montaudouin, X., Wegeberg, A. M. & Jensen, K. T. (1998). Infection characteristics of Himasthla elongata cercariae in cockles as a function of water current. Diseases of Aquatic Organisms (Online), 34(1), 63-70.

Schramm, A., De Beer, D., Van Den Heuvel, H., Ottengraf, S. & Amann, R. (1998). In situ structure/function studies in wastewater treatment systems. Water Science and Technology, 37(4-5), 413-416. https://doi.org/10.1016/S0273-1223(98)00140-1

Jensen, F. B., Jakobsen, M. H. & Weber, R. E. (1998). Interaction between haemoglobin and synthetic peptides of the N-terminal cytoplasmic fragment of trout band 3 (AE1) protein. Journal of Experimental Biology, 201(Pt 19), 2685-90.

Osmon, M. O., Jacobsen, N. O., Kristensen, J. U., Deleuran, B., Gesser, B., Larsen, C. G. & Jensen, S. L. (1998). IT 9302, a synthetic interleukin-10 agonist, diminishes acute lung injury in rabbits with acute necrotizing pancreatitis. Surgery, 124(3), 584-92.

Balslev, H. (1998). Juncaceae. In K. Kubitzki (ed.), The Families and Genera of Vascular Plants. Volume IV Flowering Plants, Monocotyledons, Alismatanae and Commelinanae (except Gramineae). Springer Verlag, Berlin Heidelberg (pp. 252-260)

Christensen, J. T., Cedhagen, T. & Hylleberg, J. (1998). Limfjordens naturforhold i fortiden - faunaændringer belyst ved subfossiler fra Bjørnsholm Bugt. In Limfjordsprojektet Rapport nr. 8 (pp. 223-234)

Bay, G. M., Baatrup, E. & Madsen, H. (1998). Locomotive behaviour of the snail Biomphalaria glabrata (Gastropoda: Pulmonata) under different conditions employing a computer automated video tracking system. In Proceedings of Workshop on Medical Malacologyin Africa, Harare, Zimbabwe, September 1997 (pp. 93-106)

Forfang, A.-S. & Olesen, J. M. (1998). Male-biased sex ratio and promiscuous pollination in the dioecious island tree Laurus azorica (Lauraceae). Plant Systematics and Evolution, 212, 143-157.

Borchsenius, F., Borgtoft Pedersen, H. & Balslev, H. (1998). Manual to the palms of Ecuador. Aarhus Universitetsforlag.

Olesen, J. M., Rønsted, N., Tolderlund, U., Cornett, C., Mølgaard, P., Madsen, J., Jones, C. G. & Olsen, C. E. (1998). Mauritian red nectar remains a mystery. Nature, 393, 529.

Nielsen, T. H. & Revsbech, N. P. (1998). Nitrification, denitrification, and N-liberation associated with two types of organic hot-spots in soil. Soil Biology and Biochemistry, 30(5), 611-619. https://doi.org/10.1016/S0038-0717(97)00211-3

Dupont, Y. (1998). Orkidémykorrhiza - en delikat balance. Svampe, 37, 29-39.

Hylleberg, J. (1998). Outlook on the occasion of the 8^th TMMP Workshop. Phuket Marine Biological Center. Special Publications, 18(1), 16-18.

Displaying results 9051 to 9100 out of 10306

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Anne Kirstine Mehlsen