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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Rasmussen, L. C. V., Mortensen, K. K. & Sperling-Petersen, H. U. (2006). Studies on Initiation of Bacterial Protein Biosynthesis. Poster session presented at International Summer School on "Molecular Basis of Bacterial Virulence andSurvival within Infected Host and in the Environment", Spetses, Grækenland.
Aagaard, L., Amarzguioui, M., Sun, G., Santos, L. C., Ehsani, A., Prydz, H. & Rossi, J. J. (2007). A Facile Lentiviral Vector System for Expression of Doxycycline-Inducible shRNAs: Knockdown of the Pre-miRNA Processing Enzyme Drosha. Molecular Therapy, 15(5), 938-945. https://doi.org/10.1038/sj.mt.6300118
Bucur, D. & Bardram, J. (2006). Resource Discovery in Activity-Based Sensor Networks. Paper presented at International Conference on Pervasive Computing Technologies for Healthcare, Austria. https://doi.org/10.1109/PCTHEALTH.2006.361663
Sætrom, P., Heale, B. S. E., Snøve, O., Aagaard, L., Alluin, J. & Rossi, J. J. (2007). Distance Constraints between microRNA Target Sites Dictate Efficacy and Cooperativity. Nucleic Acids Research (NAR). https://doi.org/10.1093/nar/gkm133
Ernst, E. (2006). Family Genericity. Daimi Report Series (DAIMI PB), (PB-578). http://www.daimi.au.dk/publications/PB/578/PB-578.pdf
Bertelsen, O. W. (2006). Tertiary Artefactness at the Interface. In P. A. Fishwick (Ed.), Aesthetic Computing (1 ed.). The MIT Press.
Bertelsen, O. W. & Zander, P.-O. (2006). Towards a Value Theory of the Interface. In DHRS 2006: Proceedings of the Sixth Danish Human-Computer Interaction Research Symposium, November 15, 2006 (pp. 7-8). Datalogisk Institut, Aahus Universitet.
Mark, B., Peter, W., McCarthy, J. & Bertelsen, O. W. (2006). Workshops: Theory and method for experience centered design. In G. M. Olson & R. Jeffries (Eds.), CHI '06: extended abstracts on Human factors in computing systems CHI '06 (pp. 1691-1695). Association for Computing Machinery. https://doi.org/10.1145/1125451.1125764
Søndergaard, C. S., Maxwell, D., Hess, D., Weinheimer, C., Rosova, I., Creer, M., Piwnica-Worms, D., Pedersen, L., Kovacs, A. & Nolta, J. (2006). Human ALDH high stem cells from umbilical cord blood home to the heart after IV injection and have minimal therapeutic benefit in an immune deficient mouse model of acute myocardial infarction. Poster session presented at International Society for Stem Cell Research 4th Annual Meeting in Toronto, Toronto, Canada.
Lee, J., Deng, X. & Bogor, R. (2006). A k-Bounded Symbolic Execution for Checking Strong Heap Properties of Open Systems. In Proceedings of Conference on Automated Software Engineering: ASE'06 (pp. 157-166). IEEE Computer Society Press.
Thomsen, E. (2006). Jordens og livets historie. In Naturgeografi: Jorden og mennesket (1 ed., pp. 27-62). Geografforlaget.
Thomsen, E. & Rasmussen, T. L. (2006). Agglutinated foraminifera using coccoliths as building material: Grain handling and wall structure. In Forams 2006 - International Conference on Foraminifra Anuário do Instituto de Geoscièncias, vol.29-1.
Bech, M., Simonsen, J. B., Handke, B., Li, Z. & Møller, P. J. (2006). Copper nucleation on ZnO(1120) in the presence of sulphur. Surface Science 600, 3375-3381.
Domenichini, B., Rizzi, G. A., Krüger, P., Della Negra, M., Li, Z., Petukhov, M., Granozzi, G., Møller, P. J. & Bourgeois, S. (2006). Experimental and theoretical evidence for substitutional molybdenum atoms in the TiO2(110)subsurface. Physical Review B, 73, 245433.
Karring, H., Thøgersen, I., Klintworth, G., Møller-Pedersen, T. & Enghild, J. J. (2006). The human cornea proteome: bioinformatic analyses indicate import of plasma proteins into the cornea. Molecular Vision, (12), 451-60.
Sun, J., Mikkelsen, A., Jensen, M. F., Koroteev, Y. M., Bihlmayer, G., Chulkow, E. V., Adams, D. L., Hofmann, P. & Pohl, K. (2006). Structural determination of the Bi(110) semimetal surfaceby LEED analysis and ab initio calculations. Physical Review B, 74, 245406.
Carroll, J. M., Bødker, S. & Coughlin, J. (Eds.) (2006). Proceedings of the Conference on Designing Interactive Systems, University Park, PA, USA, June 26-28, 2006. Society for Industrial and Applied Mathematics.
Grønbæk, K. (2006). Ubiquitous hypermedia and social interaction in physical environments. In HYPERTEXT '06: Proceedings of the seventeenth conference on Hypertext and hypermedia (pp. 119-120). Association for Computing Machinery. https://doi.org/10.1145/1149941.1149965
Bardram, J., Bunde-Pedersen, J. & Søgaard, M. (2006). Support for activity-based computing in a personal computing operating system. In R. E. Grinter, T. Rodden, P. M. Aoki, E. Cutrell, R. Jeffries & G. M. Olson (Eds.), CHI '06: Proceedings of the 2006 Conference on Human Factors in Computing Systems (pp. 211-220) https://doi.org/10.1145/1124772.1124805
Georgiadis, L., Tarjan, R. E. & Werneck, R. F. F. (2006). Design of data structures for mergeable trees. In SODA ´06: Proceedings of the Seventeenth Annual ACM-SIAM Symposium on Discrete Algorithms (pp. 394-403). Association for Computing Machinery. https://doi.org/10.1145/1109557.1109602
Heljanko, K., Junttila, T. A., Keinänen, M., Lange, M. & Latvala, T. (2006). Bounded Model Checking for Weak Alternating Büchi Automata. In T. Ball & R. B. Jones (Eds.), CAV ´06: Computer Aided Verification, 18th International Conference (pp. 95-108) https://doi.org/10.1007/11817963_12
Dax, C., Hofmann, M. & Lange, M. (2006). A Proof System for the Linear Time μ-Calculus. In FSTTCS '06: Foundations of Software Technology and Theoretical Computer Science, 26th International Conference (pp. 273-284). Springer LNCS. https://doi.org/10.1007/11944836_26
Grumberg, O., Lange, M., Leucker, M. & Shoham, S. (2007). When Not Losing Is Better than Winning: Abstraction and Refinement for the Full μ-Calculus. Information and Computation, 205(8), 1130-1148. https://doi.org/10.1016/j.ic.2006.10.009
Hansen, T. R., Eriksson, E. & Lykke-Olesen, A. (2006). Use your head: Exploring face tracking for mobile interaction. In G. M. Olson & R. Jeffries (Eds.), CHI Extended Abstracts ´06: Extended Abstracts Proceedings of the 2006 Conference on Human Factors in Computing Systems Society for Industrial and Applied Mathematics. https://doi.org/10.1145/1125451.1125617
Hirt, M. & Nielsen, J. B. (2006). Robust Multiparty Computation with Linear Communication Complexity. In C. Dwork (Ed.), Advances in Cryptology - CRYPTO 2006: 26th Annual International Cryptology Conference (pp. 463-482) https://doi.org/10.1007/11818175_28
Krukow, K. K. & Nielsen, M. (2007). From Simulations to Theorems: A Position Paper on Research in the Field of Computational Trust. In T. Dimitrakos, F. Martinelli, P. Y. A. Ryan & S. Schneider (Eds.), Formal Aspects in Security and Trust: Fourth International Workshop, FAST 2006, Hamilton, Ontario, Canada, August 26-27, 2006, Revised Selected Papers (pp. 96-111). Springer. https://doi.org/10.1007/978-3-540-75227-1_7
Krukow, K. (2006). An Operational Semantics for Trust Policies. In WITS '06: 6th International Workshop on Issues in the Theory of Security (Vol. www.brics.dk/RS/05/30/). Springer.
Schaffner, C., Crépeau, C., Savvides, G. & Wullschleger, J. (2006). Information-Theoretic Conditions for Two-Party Secure Function Evaluation. In S. Vaudenay (Ed.), Advances in Cryptology - EUROCRYPT 2006: 5th Annual International Conference on the Theory and Applications of Cryptographic Techniques (pp. 538-554) https://doi.org/10.1007/11761679_32
Miltersen, P. B. & Vinodchandran, N. V. (2005). Derandomizing Arthur-Merlin Games using Hitting Sets. Computational Complexity, 14(3), 256-279. https://doi.org/10.1007/s00037-005-0197-7
Rasmussen, T. L., Hastrup, A. & Thomsen, E. (2006). Lagoon to deep-water foraminifera and ostracods from Plio-Pleistocene deposits, Rhodes, Greece. In Forams 2006, International Symposium on Foraminifera (pp. 292-293). Anuário do Instituto de Geoscièncias, vol.29-1.
Clemmensen, A. & Thomsen, E. (2006). Paleoenvironmental interpretation of the Danian-Selandian transition (Paleocene) in the North Sea Basin based on foraminifera. In Forams 2006, International Symposium on Foraminifera (pp. 482-483). Anuário do Instituto de Geoscièncias, vol.29-1.
Meerhoff, M., Fosalba, C., Bruzzone, C., Mazzeo, N., Noordoven, W. & Jeppesen, E. (2006). An experimental study of habitat choice by Daphnia: plants signal danger more than refuge in subtropical lakes. Freshwater Biology, 51, 1320-1330. https://doi.org/10.1111/j.1365-2427.2006.01574.x
Ankjærgaard, C., Murray, A. S., Denby, P. M. & Bøtter-Jensen, L. (2006). Measurement of optically and thermally stimulated electron emission from natural minerals. Radiation Measurements, 41, 780-786.
Bos, A. J. J., Wallinga, J., Johns, C., Abellon, R. D., Brouwer, J. C., Schaart, D. R. & Murray, A. S. (2006). Accurate calibration of a laboratory beta particle dose rate for dating purposes. Radiation Measurements, 41, 1020-1025.
Choi, J. H., Murray, A. S., Cheong, C.-S., Hong, D. G. & Chiang, H. W. (2006). Estimation of equivalent dose using quartz isothermal TL and the SAAR procedure. Quaternary Geochronology, 1, 101-108.

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Mouritsen, K. N., McKechnie, S., Meenken, E., Toynbee, J. L. & Poulin, R. (2003). Spatial heterogeneity in parasite loads in the New Zealand cockle: the importance of host condition and density. Journal of the Marine Biological Association of the United Kingdom, 83, 307-310.
Yanoviak, S. P., Kragh, G. & Nadkarni, N. M. (2003). Spider assemblages in Costa Rican cloud forests: Effects of forest level and forest age. Studies on Neotropical Fauna and Environment, 38(2), 145-154. https://doi.org/10.1076/snfe.38.2.145.15922
Barfod, A. S. (2003). Studies and mapping of ecosystem diversity in northern Thailand. Aims and methods. In Working Paper – Research Centre on Forest and People in Thailand (Vol. 3, pp. 1-10). Det Strategiske Miljøforskningsprogram.
Schubert, H., Mathiesen, L. & Blindow, I. (2003). The brackish environment. In H. Schubert & I. Blindow (Eds.), Charophytes of the Baltic Sea. : The Baltic Marine Biologists Publication No. 19 (Vol. 19, pp. 15-26). Koeltz Scientific Books.
Intanai, I., Arvedsen, S., Malte, H. & Wang, T. (2003). The cardio-respiratory response to anaemia in the flatfish. In Comp. Biochem. Physiol (pp. 17-17)
Horn, M. A., Schramm, A. & Drake, H. L. (2003). The earthworm gut: An ideal habitat for ingested N2O-producing microorganisms. Applied and Environmental Microbiology, 69(3), 1662-1669. https://doi.org/10.1128/AEM.69.3.1662-1669.2003
Clausager, K. & Borchsenius, F. (2003). The Marantaceae of Sabah, northern Borneo. Kew Bulletin, 58, 647-678.
Andersen, J., Boje, K. K. & Borchsenius, F. (2003). The palm flora of Tabin Wildlife Reserve. In M. Mohamed, M. Schilthuizen & M. Andau (Eds.), Tabin Limestone Scientific Expedition 2000 (pp. 41-48). Universiti Malaysia Sabah.
Mouritsen, K. N. & Poulin, R. (2003). The risk of being at the top: foot-cropping in the New Zealand cockle Austrovenus stutchburyi. Journal of the Marine Biological Association of the United Kingdom, 83, 497-498.
Maklakov, A. A., Bilde, T. & Lubin, Y. (2003). Vibratory courtship in a web-building spider: signalling quality or stimulating the female. Animal Behaviour, 66, 623-630.
Hundahl, C., Fago, A., Malte, H., Weber, R. E., Decker, H. (Ed.) & Markl, J. (Ed.) (2003). Water is an allosteric effector in fish hemoglobins. Paper presented at Mainz, Germany, 7 - 12 September. http://www.io2bip.uni-mainz.de
Hilligsøe, K. M. (2003). Wave propagation in photonic crystal fibers. Kemisk Institut, Aarhus Universitet.
Barfod, A. S. & Price, J. (2002). A New Livistona from papua New Guinea with red flowers. Palms and Cycads, 76, 18-19.
Lund-Hansen, L. C., Christiansen, C. & Laima, M. (2002). A new video and digital camera system for seabed micro-topographic changes. Poster session presented at The Seventh Marine Geological Conference "BALTIC-7", Kaliningrad, Russian Federation.
Hansen, A., Nørberg, P., Merrison, J., Lomstein, B. A. & Finster, K. (2002). A simulation facility for biological experiments. Paper presented at Graz, Austria, 16-19 September (ESA SP-518, November 2002).
Cedhagen, T., Goldstein, S. T. & Gooday, A. J. (2002). A theme issue on the biology and biodiversity of "allogromiid" Foraminifera. Journal of Foraminiferal Research, 32(4), 331-333.
Weber, A. & Jørgensen, BB. (2002). Bacterial sulfate reduction in hydrothermal sediments of the Guaymas Basin, Gulf of California, Mexico. Deep-Sea Research Part I: Oceanographic Research Papers, 49(5), 827-841.
Duivenvoorden, J. F., Svenning, J.-C. & Wright, S. J. (2002). Beta diversity in tropical forests. Kexue (Shanghai), 295, 636-637. http://www.sciencemag.org
Ruokolainen, K., Tuomisto, H., Chave, J., Muller-Landau, H., Condit, R., Pitman, N., Duivenvoorden, J. F., Svenning, J.-C. & Wright, S. J. (2002). Beta-diversity in tropical forests. Kexue (Shanghai), 297, 1439-1439. http://www.sciencemag.org
Schippers, A. & Jørgensen, BB. (2002). Biogeochemistry of pyrite and iron sulfide oxidation in marine sediments. Geochimica et Cosmochimica Acta, 66(1), 85-92.
Toft, S., Bilde, T. & Holland.J.M. (Ed.) (2002). Carabid Diets and Food Value. In The Agroecology of Carabid Beetles (pp. 81-110)
Teilmann, J., Miller, L. A., Kirketerp, T., Kastelein, R. A., Madsen, P. T., Nielsen, B. K. & Au, W. W. L. (2002). Characteristics of echolocation signals used by a harbour porpoise (Phocoena phocoena) in a target detection experiment. Aquatic Mammals, 28(3), 275-284.
Lægaard, S., Cornejo, X., Delgado, T. E., Aguirre M., Z. (Ed.), Madsen, J. E. (Ed.), Cotton, E. (Ed.) & Balslev, H. (Ed.) (2002). Clave para las tribus y géneros de las gramíneas de Ecuador. In Botánica Austroecuatoriana: Estudios sobre los recursos vegetales en las provincias de El Oro, Loja y Zamora-Chinchipe (pp. 225-256).
Pipoly, J. J. III. & Gustafsson, M. (2002). Clusiaceae (Mangosteen Family). New York Botanical Garden. Memoirs, 76(2), 212-224.
Cedhagen, T. (2002). Danska spindlar. Fauna & flora: populär tidskrift för biologi, 97(2), 48.
Finster, K., Jensen, A.-M., Hansen, A., Lomstein, B. A., Nørberg, P. & Merrison, J. P. (2002). Description of a Mars-simulation facility. Paper presented at Graz, Austria, 16-19 September 2002.
Finster, K., Jensen, A. M., Lomstein, B. A., Nørnberg, P. & Merrison, J. P. (2002). Description of a Mars-simulation facility. Abstract from 2nd European Workshop on Exo/Astrobiology, Graz, Austria.
Lykke, A. M., Sambou, B. & Goudiaby, A. (2002). Dynamics of woody plants in a fire dominated savanna in Delta du Saloum, National Park, Senegal. Annales de Botanique de l'Afrique de l'Ouest, 67, 67-78.