Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Noe, K. Ø., De Senneville, B. D., Elstrøm, U. V., Tanderup, K. & Sørensen, T. S. (2008). Acceleration and validation of optical flow based deformable registration for image-guided radiotherapy. Acta Odontologica Scandinavica, 47(7), 1286-1293. https://doi.org/10.1080/02841860802258760

Andree, B., Hillemann, T., Kessler-Icekson, G., Schlesinger, H., Vidne, B. A., Schmitt-John, T., Jockusch, H., Arnold, H.-H. & Brand, T. (2000). Isolation and characterization of the novel Popeye gene family expressed in skeletal muscle and heart. Developmental Biology, 223, 371-382.

Wedemeyer, N., Schmitt-John, T., Evers, D., Thiel, C., Eberhard, D. & Jockusch, H. (2000). Conservation of the 3´-untranslated region of the Rab1a gene in amniote vertebrates: exceptional structure in marsupials and possible role for protein binding. FEBS Letters, 477, 49-54.

Rathke-Hartlieb, S., Schmidt, V., Jockusch, H., Schmitt-John, T. & Bartsch, J.-W. (1999). Spatiotemporal progression of neurodegeneration and glia activation in the wobbler neuropathy of the mouse. NeuroReport, 10, 3411-34116.

Resch, K., Korthaus, D., Wedemeyer, N., Lengeling, A., Thiel, C., Ronsiek, M., Baer, K., Jockusch, H. & Schmitt-John, T. (1998). Homology between human Chr 2p13 and the wobbler critical region on mouse Chr 11: Comparative high resolution mapping of STS and EST loci on YAC/BAC contigs. Mammalian Genome, 9, 893-898.

Löster, J., Immervoll, T., Schmitt-John, T. & Graw, J. (1997). Cat3vl and Cat3vao, cataract mutations on mouse chromosome 10: phenotypic characterization, linkage studies and analysis of candidate genes. Mol. Gen. Genet ., 257, 97-102.

Korthaus, D., Wedemeyer, N., Lengeling, A., Ronsiek, M., Jockusch, H. & Schmitt-John, T. (1997). Integrated Radiation Hybrid Map of Human Chromosome 2p13: Possible Involvement of Dynactin in Neuromuscular Diseases. Genomics, 43, 242-244.

Graw, J., Löster, J., Neuhäuser-Klaus, A., Pretsch, W. & Schmitt-John, T. (1996). Molecular analysis of two new Steel mutations in mice shows a transversion or an insertion. Mammalian Genome, 7, 843-846.

Löster, J., Pretsch, W., Sandulache, R., Schmitt-John, T., Lyon, M. F. & Graw, J. (1994). Close linkage of the dominant cataract mutations (Cat-2) with Idh-I and Cryge on mouse chromosome 1. Geomics, 23, 240-242.

Pietrowski, D., Durante, M. J., Liebstein, A., Schmitt-John, T., Werner, T. & Graw, J. (1994). α-crystallins are involved in specific interactions with the murine γD/E/F-crystallin-encoding gene. Gene, 144, 171-178.

Graw, J., Liebstein, A., Pietrowski, D., Schmitt-John, T. & Werner, T. (1993). Genomic sequences of murine γB- and γC-crystallin genes: promoter analysis and complete evolutionary pattern of mouse rat and human γ-crystallins derived from exon 3. Gene, 136, 145-156.

Andersen, K. R., Jonstrup, A. T., Van, L. B. & Brodersen, D. E. (2008). Structure of the Pop2p deadenylation subunit in two functional states. Poster session presented at RNA 2008, Berlin, Germany.

Schmitt-John, T. & Engels, J. (1992). Promoter constructions for an efficient secretion-expression in Streptomyces lividans. Appl. Microbiol. Biotechnol, 493-498.

Assenholt, J., Mouaikel, J., Andersen, K. R., Brodersen, D. E., Libri, D. & Jensen, T. H. (2008). Exonucleolysis is required for several aspects of nuclear quality control of mRNA. Poster session presented at RNA 2008, Berlin, Germany.

Schmitt-John, T. (2001). Chromosome 2. In Wiley Encyclopedia of Molecular Medicine (pp. 784-787). IEEE Computer Society Press.

Lund, M. K. (2008). Autoregulation of Npl3, a yeast SR protein, requires a novel downstream region and serine phosphorylation. Molecular and Cellular Biology, 28(11), 3873-81.

Jockusch, H., Nave, K.-A., Grenningloh, G. & Schmitt-John, T. (1997). Molecular genetics of nervous and neuromuscular systems. In Molecular Biology of the Neuron (pp. 21-66). BIOS Scientific Publishers.

Knudsen, H., Holzscheiter, M. H., Bassler, N., Alsner, J., Beyer, G., DeMarco, J. J., Doser, M., Hajdukovic, D., Hartley, O., Iwamoto, K. S., Jäkel, O., Kovacevic, S., Møller, S. P., Overgaard, J., Petersen, J. B. B., Ratib, O., Solberg, T. D., Vranjes, S., Wouters, B. G. & the CERN ACE Collaboration (2008). Antiproton therapy. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, 266(3), 530-534. https://doi.org/10.1016/j.nimb.2007.12.035

Cirone, M. A., Negretti, A., Recati, A. & Calarco, T. (2008). Complexity, noise and quantum information on atom chips. International Journal of Quantum Information, 6(1 supp, 633), 633-638. https://doi.org/10.1142/S0219749908003888

Vissing, K., Overgaard, K., Nedergaard, A., Fredsted, A. & Schjerling, P. (2008). Effects of concentric and repeated eccentric exercise on muscle damage and calpain-calpastatin gene expression in human skeletal muscle. European Journal of Applied Physiology, 103(3), 323-32. https://doi.org/10.1007/s00421-008-0709-7

Madsen, L. B. & Dimitrovski, D. (2008). Time-resolved subcycle dynamics: Importance of physical fields and gauge invariance. Physical Review A, 78(023403). https://doi.org/10.1103/PhysRevA.78.023403

Rasmusson, A., Mosegaard, J. & Sørensen, T. S. (2008). Exploring Parallel Algorithms for Volumetric Mass-Spring-Damper Models in CUDA. Lecture Notes in Computer Science, 5104, 49-58. https://doi.org/10.1007/978-3-540-70521-5_6

Abruzzi, K., Denome, S., Olesen, J. R., Assenholt, J., Haaning, L. L., Jensen, T. H. & Rosbash, M. (2007). A Novel Plasmid-Based Microarray Screen Identifies Suppressors of rrp6Δ in Saccharomyces cerevisiae. Molecular and Cellular Biology, 27(3), 1044-1055. http://mcb.asm.org/content/27/3/1044.full

Nygaard, N., Piil, R. T. & Mølmer, K. (2008). Two-channel Feshbach physics in a structured continuum. Physical Review A, 78(023617). https://doi.org/10.1103/PhysRevA.78.023617

Malagon, F. & Jensen, T. H. (2008). The T-body: a new cytoplasmic RNA granule in Saccharomyces cerevisiae. Molecular and Cellular Biology.

Schmid, M. & Jensen, T. H. (2008). The exosome: a multipurpose RNA decay machine. Trends in Biochemical Sciences.

Rougemaille, M., Kisseleva-Romanova, E., Gudipati, RK., Lemoine, S., Blugeon, C., Boulay, J., Jensen, T. H., Devaux, F. & Libri, D. (2008). Non-productive docking of mRNP's to the nucleopore in THO/sub2 mutants. Cell.

Schmid, M., Rougemaille, M., Libri, D. & Jensen, T. H. (2008). Estimating nuclear mRNA decay in S. cerevisiae. Methods in Enzymology.

Schmid, M. & Jensen, T. H. (2008). Nuclear surveillance of mRNP formation. Chromosoma.

Hovgaard, M. B., Rechendorff, K., Chevallier, J., Foss, M. & Besenbacher, F. (2008). Fibronectin Adsorption on Tantalum: The Influence of Nanoroughness. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 112, 8241-8249. https://doi.org/10.1021/jp801103n

Østergaard, M., Ernst, A., Labouriau, R. S., Dagiliené, E., Krarup, H. B., Christensen, M., Thorsgaard, N., Jacobsen, B. A., Tage-Jensen, U., Overvad, K., Autrup, H. & Andersen, V. (2009). Cyclooxygenase-2, multidrug resistance 1, and breast cancer resistance protein gene polymorphisms and inflammatory bowel disease in the Danish population. Scandinavian Journal of Gastroenterology, 44(1), 65-73. https://doi.org/10.1080/00365520802400826

Hansen, J. H., Conley, L. N., Hedegaard, J. & Thomsen, B. (2008). Transcriptomic analysis of porcine skeletal muscles exposed to a single bout of endurance exercise. In Proceedings of ISAG2008: Poster 2040

Hedegaard, C., Glud, A. N., Nielsen, M. S., Bjarkam, C. R., Sørensen, J. C., Jensen, P. H., Bendixen, C. & Larsen, K. (2008). Viral-vector Mediated Transgenesis in the Göttingen Minipig Brain. In Proceedings of ISAG 2008: Poster 5038

Matchkov, V., Per, L., Pedersen, F. S., Nilsson, H. & Aalkjær, C. (2008). Bestrophin-3 is important for vasomotion. Poster session presented at 25th Conference of the European Society for Microcirculation, Budapest, Hungary.

Gregersen, V. R., Vingborg, R. K. K., Sørensen, K. K. & Bendixen, C. (2008). Data validation and alorithmic design for chromosome grouping of SNPs from a 7K genomewide porcine chip. In Proceeding of ISAG 2008: Poster 5013

Nielsen, M. & Thomsen, B. (2008). MicroRNA expression in differentiating porcine myoblast cells. In Proceeding of ISAG 2008: Poster 2218

Fadista, J., Bendixen, C., Thomsen, B. & Holm, L.-E. (2008). A snapshot of Copy Number Variation in the Pig Genome. In Proceedings of ISAG 2008: Poster 2092

Panitz, F., Andersen, P. K. & Bendixen, C. (2008). Bovine placenta transcript analysis using 454 sequencing. In Proceedings of ISAG 2008: Poster 2085

Vingborg, R. K. K., Gregersen, V. R., Høj, A., Panitz, F., Zhan, B., Hornshøj, H., Sørensen, K. K. & Bendixen, C. (2008). Whole Porcine genome linkage map based on the 7K porcine SNP Chip. In Proceeding of ISAG 2008: Poster 2081

Tendal, O. S. & Cedhagen, T. (2007). Schizammina andamana n.sp., a large foraminiferan (Protozoa, Granuloreticulosa) from the shelf west of Thailand. Phuket mar. biol. Cent. Res. Bull., 68, 11-19.

Vardya, I., Drasbek, K. R., Dósa, Z. & Jensen, K. (2008). Cell type-specific GABA_A receptor-mediated tonic inhibition in mouse neocortex. Journal of Neurophysiology, 100, 526-532. https://doi.org/10.1152/jn.01224.2007

Nielsen, K. H. (2008). Nanotech, blur and tragedy in recent artworks by Gerhard Richter. Leonardo: Art Science and Technology, 41(5), 484-492.

Stapulionis, R., Wang, Y., Dempsey, G. T., Khudaravalli, R., Nielsen, K. M., Cooperman, B. S., Goldman, Y. E. & Knudsen, C. R. (2008). Fast in vitro translation system immobilized on a surface via specific biotinylation of the ribosome. Biological Chemistry, 389(9), 1239-1249.

Mansilla, F., Dominguez, C. A. G., Yeadon, J. E., Corydon, T. J., Burden, S. J. & Knudsen, C. R. (2008). Translation elongation factor eEF1A binds to a novel myosin binding protein-C-like protein. Molecular and Cellular Biology, 105(3), 847-858.

Andersen, H. E., Heckrath, G., Thodsen, H., Dybkjær, J. B. & Ovesen, N. B. (2008). Fosfortab fra det dyrkede areal til Stevning Dam, Hindemaj og Haderslev Dam: Kortlægning af risikoarealer og forslag til virkemidler. Danmarks Miljøundersøgelser, Aarhus Universitet. Arbejdsrapport fra DMU No. 245 http://www2.dmu.dk/Pub/AR245.pdf

Buhr, H., Pedersen, H. B., Altevogt, S., Andrianarijaona, V. M., Kreckel, H., Lammich, L., Novotny, S., Strasser, D., Hoffmann, J., Lange, M., Lestinsky, M., Mendes, M. B., Motsch, M., Novotny, O., Schwalm, D., Urbain, X., Zajfman, D. & Wolf, A. (2008). Inelastic electron collisions of the isotopically symmetric helium dimer ion ⁴He₂⁺ in a storage ring. Physical Review A, 77, 032719.

Weibel, R., Gjettermann, F. & Friis, H. (2008). Petrography in the Rau-1 well, Siri Canyon, Danish North Sea. Danmarks og Grønlands Geologiske Undersøgelse. Rapport / Danmarks og Grønlands Geologiske Undersøgelse Vol. 2008/46

Basbøll, A. (2008). Supersymmetric flat direction decay: The prospect of particle production and preheating investigated in the unitary gauge. Physical Review D, 78(2). https://doi.org/10.1103/PhysRevD.78.023528

Bjælde, O. E., Brookfield, A. W., van de Bruck, C., Hannestad, S., Mota, D. F., Schrempp, L. & Tocchini-Valentini, D. (2008). Neutrino dark energy - revisiting the stability issue. Journal of Cosmology and Astroparticle Physics, 01(2008)(026). https://doi.org/10.1088/1475-7516/2008/01/026

Hamann, J., Hannestad, S., Melchiorri, A. & Wong, Y. Y. Y. (2008). Non-linear corrections to the cosmological matter power spectrum and scale-dependent galaxy bias: implications for parameter estimation. Journal of Cosmology and Astroparticle Physics, 07(2008)(017). https://doi.org/10.1088/1475-7516/2008/07/017

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