Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Johannsen, M. & Jørgensen, K. A. (1998). Allylic Amination. Chemical Reviews, 98, 1689.

Yao, S.-L., Johannsen, M., Audrain, H. & Jørgensen, K. A. (1998). Catalytic Asymmetric Hetero-Diels-Alder Reactions of Ketones: Chemzymatic Reactions. Journal of the American Chemical Society, 120, 8599.

Johannsen, M., Jørgensen, K. A. & Helmchen, G. (1998). The first Chiral and Highly Lewis Acidic Silyl Cationic Catalyst. Journal of the American Chemical Society, 120, 7637.

Thorhauge, J., Johannsen, M. & Jørgensen, K. A. (1998). Highly Enantioselective Catalytic Hetero-Diels-Alder Reaction with Inverse Electron Demand. Angewandte Chemie International Edition, 37, 2404.

Yao, S.-L., Johannsen, M., Hazel, R. G. & Jørgensen, K. A. (1998). Catalytic Enantioselective Aza-Diels-Alder Reactions of Imino Dienophiles. Angewandte Chemie International Edition, 37, 3121.

Johannsen, M., Jørgensen, K. A., Zheng, X.-F., Hu, Q.-S. & Pu, L. (1999). A Highly Enantioselective Hetero-Diels-Alder Reaction Catalyzed by Chiral Polybinaphthyl-Aluminum Complexes. J. Org. Chem., 64, 299.

Jørgensen, K. A., Johannsen, M., Yao, S.-L., Audrain, H. & Thorhauge, J. (1999). Catalytic Asymmetric Addition Reactions of Carbonyls: A Common Catalytic Approach. Accounts of Chemical Research, 32, 605.

Fang, X., Johannsen, M., Yao, S.-L., Gatherhood, N., Hazel, R. G. & Jørgensen, K. A. (1999). A Catalytic Approach for the Formation of Optically Active Allyl α-Amino Acids by Addition of Allylic-Metal Compounds to a α-Imino Esters. J. Org. Chem., 64, 4844.

Pagter, J. I., Toft, T., Damgård, I. B., Bogetoft, P., Nielsen, K. & Jakobsen, T. (2005). Secure Computing, Economy, and Trust - A Generic Solution for Secure Auctions with Real-World Applications. BRICS Report Series, (RS-05-18), 1-35.

Hundahl, C., Stoltenberg, M., Fago, A., Weber, R. E., Dewilde, S., Fordel, E. & Danscher, G. (2005). Effects of short-term hypoxia on neuroglobin levels and localization in mouse brain tissues. In Comparative Biochemistry and Physiology, Part A, vol. 141 (pp. s189)

Muftuoglu, M., Sharma, S., Thorslund, T., Stevnsner, T. V., Sørensen, M. M., Brosh, R. M. & Bohr, V. (2006). Cockayne syndrome group B protein has novel strand annealing and exchange activities. Nucleic Acids Res. , 34, 295-304.

Kristensen, D. M. & Andersen, E. S. (2004). Stamceller - kroppens egne schweizerknive. Jyllands-Posten, Indblik.

Offenberg, J., Nielsen, M. G., Macintosh, D., Havanon, S. & Aksornkoae, S. (2005). Lack of ant attendance may induce compensatory plant growth. Oikos, 111, 170-178.

Sanggaard, K. (2005). Defekte proteiner kan forklare barnløshed. Aktuel Naturvidenskab, (6), 11.

Ehlers, B., Maurice, S. & Bataillon, T. (2005). Sex inheritance in gynodioecious species: a polygenic view. Proceedings of the Royal Society B: Biological Sciences, 272, 1795 - 1802.

Ulrich-Vinther, M., Schwarz, E. M., Pedersen, F. S., Søballe, K. & Andreassen, T. T. (2005). Gene therapy with human osteoprotegerin decreases callus remodelling with limited effects on biomechanical properties. Bone, 37(6), 751-758. https://doi.org/10.1016/j.bone.2005.07.021

Sørensen, H. P., Laursen, B. S., Mortensen, K. K. & Sperling-Petersen, H. U. (2002). Bacterial Translation Initiation - Mechanism and Regulation. Recent Research Developments in Biophysics and Biochemistry., 2, 243-270.

Dupont, Y., Hansen, D. M., Valido, A. & Olesen, J. M. (2004). Introduced honeybees on islands: impacts on native pollination interactions. Ecologia Mediterranea, 30, 104-105.

Wang, T., Hung, C. C. Y. & Randall, D. J. (2006). The comparative physiology of food deprivation: From feast to famine. Annual Review of Physiology, 68, 223-251.

Dewilde, S., Ebner, B., Vinck, E., Gilany, K., Hankeln, T., Burmester, T., Kreiling, J., Reinisch, C., Vanfleteren, J. R., Kiger, L., Marden, M. C., Hundahl, C., Fago, A., Doorslaer, S. V. & Moens, L. (2006). The nerve hemoglobin of the bivalve mollusc Spisula solidissima. Journal of Biological Chemistry, 281(9), 5364-5372.

Andersen, A. H. (2005). Det usynlige termometer.

Christiansen, F. B. (2005). Population Genetics with a view towards Bioinformatics. Lecture Notes in Molecular Population Genetics. Eget.

Christiansen, F. B. (2004). Lecture Notes in Population Genetics. Eget.

Christiansen, F. B. (2003). Lecture Notes in Population Genetics. Eget.

Christiansen, F. B. (2001). Lecture Notes in Population Genetics. Eget.

Christiansen, F. B. (1999). Lecture Notes in Population Genetics. Eget.

Christiansen, F. B. (1979). Noter til Populationsgenetik. Eget.

Christiansen, F. B. (1977). Noter til videregående Populationsgenetik. Eget.

Christiansen, F. B. (1998). gen. In Den Store Danske Encyklopædi (Vol. 7, pp. 348–349). Gyldendal.

Christiansen, F. B. (1999). populationsgenetik. In Den Store Danske Encyklopædi (Vol. 15, pp. 387–388). Gyldendal.

Christiansen, F. B. & Fenchel, T. (1977). Theories of Populations in Biological Communities. Springer.

Christiansen, F. B. & Feldman, M. W. (1986). Population Genetics. Blackwell Science Ltd.

Christiansen, F. B. (1999). Population Genetics of Multiple Loci. John Wiley & Sons Ltd.

Christiansen, F. B. & Fenchel, T. M. (Eds.) (1977). Measuring Selection in Natural Populations. Springer.

Støvring, K. (2006). Extending the Extensional Lambda Calculus with Surjective Pairing is Conservative. Logical Methods in Computer Science, 2(2(1)), 1-14.

Bødker, S. & Madsen, K. H. (1998). Context: An active Choice in Usability Work. interactions, (4), (17-25).

Petersen, M. G., Madsen, K. H. & Kjær, A. (2002). The Usability of Everyday Technology: Emerging and Fading Opportunities. ACM Transactions on Computer-Human Interaction, 9(2), (74-105).

Brix, H. & Cizková, H. (2001). Aquatic Botany, special edition. Aquatic Botany, 69.

Kristensen, T. N., Sørensen, P., Kruhøffer, M., Pedersen, K. S. & Loeschcke, V. (2005). Genome wide analysis on inbreeding effects on gene expression in Drosophila melanogaster. Genetics, 171(1), 157-67.

Skydsgaard, M. A. (1998). Fever, the Galenic six non-naturals and the healing power of nature in Denmark around 1800. In Ikke angivet (pp. 66-67). Afdeling for medicinsk filosofi, etik og metode, Københavns Universitet.

Skydsgaard, M. A. (1999). Febersygdommenes teori ved Københavns Universitet 1790-1840. En analyse af årsagsbegreb, sygdomsmekanismer, naturbegreb og videnskabelig argumentation. Bibliotek for Læger, (4), 357-385.

Skydsgaard, M. A. & Wulff, H. R. (1998). The evolution of Western Medicine. The European Journal of Medicine, Health Care and Philosophy, (1), 79-81.

Skydsgaard, M. A. (2001). Medicinsk Historisk Årbog 2000. Ugeskrift for Læger, (51), 7269-70.

Skydsgaard, M. A. (2004). Ventegodts djævelske humanisme. Dagbladet Information.

Skydsgaard, M. A. (2000). Dansk medicinhistorisk litteratur. In Ve og Vel. Medicinens historie fra oldtid til nutid (pp. 759-761). Rosinante.

Skydsgaard, M. A. (2004). Er græsset så grønnere på den anden side...? - om et ph.d.-projekt. Årsskrift for Medicinsk Museion, (1), 12-18.

Manuilov, V. & Thomsen, K. (2006). On the asymptotic tensor C*-norm. Arch. Math., 86, 138-144.

Mansilla, F., Hansen, LL., Jakobsen, H., Kjeldgaard, NO., Clark, B. F. C. & Knudsen, C. R. (2005). Deconstructing PTI-1: PTI-1 is a truncated, but not mutated, form of translation elongation factor 1A1, eEF1A1. Biochim. Biophys. Acta., 1727(2), 116-24.

Fedosov, S., Örning, L., Løvli, T., Quadros, E. V., Thompson, K., Berglund, L. & Petersen, T. E. (2005). Mapping the functional domains of human transcobalamin using monoclonal antibodies. FEBS journal, 272, 3887-3898.

Brodal, G. S., Kaligosi, K., Katriel, I. & Kutz, M. (2006). Faster Algorithms for Computing Longest Common Increasing Subsequences. In M. Lewenstein & G. Valiente (Eds.), Combinatorial Pattern Matching (pp. 330-341). Springer. https://doi.org/10.1007/11780441_30

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Jacobsen, L. M. W., Hansen, M. M., Orlando, L. A. A., Bekkevold, D., Bernatchez, L., Willerslev, E. & Gilbert, M. T. P. (2012). Mitogenome sequencing reveals shallow evolutionary histories and recent divergence time between morphologically and ecologically distinct European whitefish (Coregonus spp.). Molecular Ecology, 21, 2727-2742.

Ndayishimiye, J., Greve, M., Stoffelen, P., Bigendako, M. J., De Cannière, C., Svenning, J.-C. & Bogaert, J. (2012). Modelling the spatial distribution of endemic Caesalpinioideae in Central Africa, a contribution to the evaluation of actual protected areas in the region. International Journal of Biodiversity and Conservation, 4(3), 118-129. https://doi.org/10.5897/IJBC11.150

Tuni, C., Goodacre, S., Bechsgaard, J. S. & Bilde, T. (2012). Moderate multiple parentage and low genetic variation reduces the potential for genetic incompatibility avoidance despite high risk of inbreeding. PLoS One, 7(1), e29636. https://doi.org/10.1371/journal.pone.0029636

Campbell, K. L., Signore, A. V., Harada, M. & Weber, R. E. (2012). Molecular and physicochemical characterization of hemoglobin from the high-altitude Taiwanese brown-toothed shrew (Episoriculus fumidus). Journal of Comparative Physiology B: Biochemical, Systems, and Environmental Physiology, 2012(182). https://doi.org/10.1007/s00360-012-0659-6

Borchsenius, F., Surez, L. S. S. & Prince, L. M. (2012). Molecular phylogeny and redefined generic limits of Calathea (Marantaceae). Systematic Botany, 37(3), 620-635. https://doi.org/10.1600/036364412X648571

Obst, M., Faurby, S., Bussarawit, S. & Funch, P. (2012). Molecular phylogeny of extant horseshoe crabs (Xiphosura, Limulidae) indicates Paleogene diversification of Asian species. Molecular Phylogenetics and Evolution, 62, 21-26. https://doi.org/10.1016/j.ympev.2011.08.025

Hansen, M. M., Olivieri, I., Waller, D. M. & Eg Nielsen, E. (2012). Monitoring adaptive genetic responses to environmental change. Molecular Ecology, 21, 1311-1329.

García, M. B., Pardo, I., Pata, M. P., Camarero, J. J., García-González, R., Errea, P., Gómez, D., Pironon, S., Aldezábal, A., Olesen, J. M., Roquet, C. & Lavergne, S. (2012). Monitorización de la biodiversidad vegetal y sus distintos componentes en un parque nacional de montaña. In L. Ramírez & B. Asensio (Eds.), Proyectos de investigación en parques nacionales: 2008-2011 (pp. 219-234). Ministerio de Agricultura, Alimentación y Medio Ambiente.

Sheriff, M. J., Wheeler, H., Hik, D. S., Donker, S. A., Krebs, C. J., Palme, R. & Boonstra, R. (2012). Mountain-top and valley-bottom experiences: The stress axis as an integrator of environmental variability in arctic ground squirrel populations. Journal of Zoology, 287(1), 65-75. https://doi.org/10.1111/j.1469-7998.2011.00888.x

Matamoras, V., Loc, N. X., Arias, C. A., Nielsen, S., Mølmer Laugen, M. & Brix, H. (2012). Musk fragrances, DEHP and heavy metals in a 20 years old sludge treatment reed bed system. Water Research, 46, 3889-3896. https://doi.org/10.1016/j.watres.2012.04.027

Nielsen, M. G. & Larsen, R. B. (2012). Myrer i Danmark. Natur og Museum, (3), 1-34.

Clausen, K. K., Fælled, C. C. & Clausen, P. (2012). Når ålegræsset forsvinder følger fuglene med. Poster session presented at Temadag om Vildtforskningen i Danmark, Aarhus, Denmark.

Molina, V., Fernández, C., Levipan, H., Ulloa, O., Dalsgaard, T., Thamdrup, B. & Revsbech, N. P. (2012). Natural ammonium oxidizer´s response to chemical changes in the permanent and seasonal oxygen minimum zones of Chile. Poster session presented at 14th International Symposium on Microbial Ecology, København, Denmark.

Olesen, J. M. (2012). Netværk. Aarhus Universitetsforlag. Tænkepauser - viden til hverdagen Vol. 2

Øllgaard, B. (2012). New combinations in Neotropical Lycopodiaceae. Phytotaxa, 2012, 10-22.

Glombitza, C., Bernard, S., Mangelsdorf, K., Schreiber, A., Steffens, M. & Kögel-Knabner, I. (2012). New insights into gas shale fabrics using selective chemical degradation combined with STXM. Abstract from 3rd EAGE Shale Workshop, Barcelona, Spain.

Helbo, S. & Fago, A. (2012). Nitrite reductase activities and O₂ binding of myoglobins from whales with different diving capacities. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.

Helbo, S. & Fago, A. (2012). Nitrite reductase activities of myoglobins from five whale species with distinct diving capacities. Abstract from Seventh International Conference on the Biology, Chemistry and Therapeutic Application of Nitric Oxide, Edinburgh, United Kingdom. https://doi.org/10.1016/j.niox.2012.04.126

Riis, T., Dodds, W., Kristensen, P. B. & Baisner, A. J. (2012). Nitrogen cycling and dynamics in a macrophyte-rich stream as determined by a 15N release. Freshwater Biology, 57, 1579-1591.

Riis, T., Dodds, W. K., Kristensen, P. B. & Baisner, A. J. (2012). Nitrogen cycling and dynamics in a macrophyte-rich stream as determined by a release. Freshwater Biology, 57(8), 1579-1591. https://doi.org/10.1111/j.1365-2427.2012.02819.x

Natarajan , C., Moriyama , H., Weber, R. E. & Fago, A. (2012). Nonadditive interaction effects between hemoglobin mutations: evolutionary implications. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.

Rotaru, A.-E., Jiang, W., Finster, K., Skrydstrup, T. & Meyer, R. L. (2012). Non-enzymatic palladium recovery on microbial and synthetic surfaces. Biotechnology and Bioengineering (Print), 109(8), 1889-1897. https://doi.org/10.1002/bit.24500

Pedersen, J. B., Nielsen, J. M., Steingrund, P., Hansen, B., Hátún, H., Grønkjær, P. & Christensen, J. T. (2012). North Atlantic ecosystem shifts revealed by cod otolith δ¹⁵N and δ¹³C chronologies. Abstract from Nordic Climate-Fish 2nd Conference, Risør, Norway.

Øllgaard, B. (2012). Nota Científica/Short Communication: Nomenclatural changes in Brazilian Lycopodiaceae. Rodriguesia, 63(2), 479-482.

Juul-Pedersen, T., Arendt, K. E., Mortensen, J., Retzel, A., Nygaard, R., Burmeister, A., Sejr, M. K., Blicher, M. E., Krause-Jensen, D., Olesen, B., Labansen, A. L., Rasmussen, L. M., Witting, L., Boye, T., Simon, M. & Rysgaard, S. (2012). NUUK BASIC: The MarineBasis programme. In L. M. Jensen (Ed.), Nuuk Ecological Research Operations: 5th Annual Report 2011 (pp. 47-68). Aarhus University, DCE - Danish Centre for Environment and Energy. http://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/NERO_2012.pdf

Toftdal, C. N. (2012). Ny viden om hvalernes imponerende måltider. Aarhus Stiftstidende.

Matamoros, V., Arias, C. A., Loc, N. X., Salvadó, V. & Brix, H. (2012). Occurrence and behavior of emerging contaminants in surface water and a restored wetland. Chemosphere, 88(9), 1083-1099. https://doi.org/10.1016/j.chemosphere.2012.04.048

Matamoros, V., Arias, C. A., Loc, N. X., Salvadó, V. & Brix, H. (2012). Occurrence and behavior of emerging contaminants in surface water and restored wetland. Chemosphere, 88(9), 1083-1089. https://doi.org/10.1016/j.chemosphere.2012.04.048

Therkildsen, L., Riis, T., Baattrup-Pedersen, A. & Kristensen, E. A. (2012). Økologiske effekter af deponeret sediment i ådale ved vinteroversvømmelser som følge af klimaforandringer. Poster session presented at Ferskvandssymposium 2012, Odense, Denmark.

Sedmera, D. & Nielsen, T. W. (Eds.) (2012). Ontogeny and Phylogeny of the Vertebrate Heart. Springer. https://doi.org/10.1007/978-1-4614-3387-3

Jensen, K., Mayntz, D., Toft, S., Clissold, F. J., Hunt, J., Raubenheimer, D. & Simpson, S. J. (2012). Optimal foraging for specific nutrients in predatory beetles. Proceedings of the Royal Society B: Biological Sciences, 279(1736), 2212-2218. https://doi.org/10.1098/rspb.2011.2410, https://doi.org/10.1098/rspb.2011.2410

Sell, H., Vedel-Smith, C., Svendsen, J. & Olsen, K. (2012). Optimal natur i Nationalpark Mols Bjerges kulturlandskab – rødrygget tornskade Lanius collurio som kræsen modelorganisme mht. naturkvalitet, fødegrundlag og menneskelige forstyrrelser. Naturhistorisk Museum.

Feilberg, A., Nielsen, J. L., Mosbæk, F., Nielsen, M., Revsbech, N. P. & Ottosen, L. D. M. (2012). Optimering af biogasprocessen. Forskning i Bioenergi, 28-29. http://www.biopress.dk/PDF/bioenergi_2012/Bioenergi_2012.pdf

Signatore, A. V., Stetefeld, J., Weber, R. E. & Campbell, K. L. (2012). Origin and mechanism of thermal insensitivity in mole hemoglobins: a test of the ‘additional’ chloride binding site hypothesis. Journal of Experimental Biology, 215(3), 518-525. https://doi.org/10.1242/jeb.063669

Mattila, T., Bechsgaard, J. S., Hansen, T., Schierup, M. H. & Bilde, T. (2012). Ortholog genes identified by transcriptome sequencing in the spider genus Stegodyphus. BMC Genomics, 13(70). https://doi.org/10.1186/1471-2164-13-70

Schlafer, S., Raarup, M. K., Wejse, P. L., Nyvad, B., Stadler, B. M., Sutherland, D. S., Birkedal, H. & Meyer, R. L. (2012). Osteopontin Reduces Biofilm Formation in a Multi-Species Model of Dental Biofilm. PLoS One, 7(8), e41534. https://doi.org/10.1371/journal.pone.0041534

Storz, J. F., Weber, R. E. & Fago, A. (2012). Oxygenation properties and oxidation rates of mouse hemoglobins that differ in reactive cysteine content. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 161, 265-270. https://doi.org/10.1016/j.cbpa.2011.11.004

Weber, R. E., Fago, A., Malte, H., Storz, J. F. & Gorr, T. A. (2012). Oxygen binding by dwarf caiman haemoglobin that lacks key allosteric effector-binding sites. Abstract from Proc. Society of Experimental Biology, Annual Meeting.

Lefevre, S. (2012). Oxygen requirements in the air-breathing fish Pangasianodon hypophthalmus and Channa striata: Effects of hypoxia, nitrite, exercise, and digestion. Det Naturvidenskabelige Fakultet, Aarhus Universitet.

Mairbäurl, H. & Weber, R. E. (2012). Oxygen Transport by Hemoglobin. Comprehensive Physiology, 2, 1463-1489. https://doi.org/10.1002/cphy.c080113

Bussarawit, S. & Cedhagen, T. (2012). Oyster Fauna of Thailand. Seto Marine Biological Laboratory. Publications.

Jørgensen, B. B. & Toftdal, C. N. (2012). På jagt efter viden om havbundens ukendte liv. Biozoom, 2012(3), 12-14. http://www.biokemi.org/pdfs/2444/BioZoom_032012_3.pdf?1354454385

Balslev, H., Zambrana, N. P., Blacutt, E., R., M. M., Macia, M. J., Parada, A., Inturias, Y., Perez, Z., Teran, J., Arrieta, M. A., Rios, C. A. G. & Serralta, A. (2012). Palmeras de los Leco y sus usos. Herbario Nacional de Bolivia, 2012.

Alvarado-Segura, A. A., Calvo-Irabién, L. M., Stefano, R. D. D. & Balslev, H. (2012). Palm species richness, abundance and diversity in the Yucatan Peninsula, in a neotropical context. Nordic Journal of Botany, 30(5), 613-622. https://doi.org/10.1111/j.1756-1051.2012.01593.x

Projecto-Garcia, J., Natarajan, C., Witt, C. C., Cheviron, Z. A., Moriyama, H., Weber, R. E., Fago, A. & Storz, J. F. (2012). Parallel evolution of hemoglobin function in Andean hummingbirds. Abstract from XVII International Conference on Oxygen Binding and Sensing Proteins, Parma, Italy.

Feis, M. E., Thieltges, D. W., Olsen, J. L., de Montaudouin, X., Jensen, K. T., Bazairi, H., Culloty, S. C. & Luttikhuizen, P. C. (2012). Parasite population genetic structure in relation to definitive host type. Integrative and Comparative Biology, 52(Suppl.1).

Toft, S., Nielsen, B. O. & Funch, P. (2012). Parasitoid suppression and life-history modifications in a wolf spider following infection by larvae of an acrocerid fly. Journal of Arachnology, 40, 13-17. http://www.americanarachnology.org/JoA_tocs/JOA_contents_v40n1.html

Skaala, Ø., Glover, K. A., Barlaup, B. T., Svåsand, T., Besnier, F., Hansen, M. M. & Borgstrøm, R. (2012). Performance of farm, hybrid and wild Atlantic salmon (Salmo salar) families in a natural river environment. Canadian Journal of Fisheries and Aquatic Sciences, 69, 1994-2006.

Frenck, G., Linden, L. G., Mikkelsen, T. N., Brix, H. & Bagger Jørgensen, R. (2012). Phenotypic divergence of ecophysiological traits under manipulated CO₂ and temperature conditions in Brassica napus over five generations. Paper presented at Annual Meeting og the Society of Experimental Biology (SEB) , Salzburg, Austria.

Achenbach, L., Lambertini, C. & Brix, H. (2012). Phenotypic traits of Phragmites australis clones are not related to ploidy level and distribution range. A O B Plants, 2012, pls017. https://doi.org/10.1093/aobpla/pls017

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