Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Søndergaard, L., Aarsleff, E., Birch, T. & Andreasen, R. (2025). Fold it – recent finds of figural handles from Roman folding knives in Denmark. Danish Journal of Archaeology, 14(1), 1-17. https://doi.org/10.7146/dja.v14i1.146772

Vandsø, A., Leth-Espensen, P., Barfod, A. S., Oelsner, G. & Shepherd, N. (2025). Skjulte Plantehistorier: Nær og fjernanalyse af dansk kunst med stueplanter fra 1820 til 1920 som kilde til ny viden og formidling. Perspective. https://www.perspectivejournal.dk/skjulte-plantehistorier-naer-og-fjernlaesninger-af-dansk-kunst-med-stueplanter-fra-1820-til-1920-som-kilde-til-ny-viden-og-formidling/

Vandsø, A., Leth-Espensen, P., Barfod, A. S., Oelsner, G. & Shepherd, N. (2025). Verden i vindueskarmen. In Plantefeber: Verden i vindueskarmen (pp. 14-25). Aarhus Universitetsforlag.

Natta, G., Merl, T., Laini, A., Roggero, A., Rolando, A., Palestrini, C., Koren, K. & Marzocchi, U. (2025). Planar optodes reveal spatiotemporal heterogeneity of oxic and pH microenvironments driven by dung beetle activity in soil. Soil Biology and Biochemistry, 211, Article 109965. https://doi.org/10.1016/j.soilbio.2025.109965

Brix, M. V. B., Kløve, M., Stubkjær, R. B., Kato, K. & Iversen, B. B. (2025). Unraveling the Crystal Structures of Ag ₂Ch (Ch = S, Se, Te) via Simultaneous X-Ray Diffraction and Total Scattering. Journal of the American Chemical Society, 147(29), 25858-25870. https://doi.org/10.1021/jacs.5c07875

Nielsen, K. H. (2025). Myten om Silkevejen. Weekendavisen, Sektion 4 (Ideer), 5.

Nielsen, K. H. (2025). Kvantekrig. Weekendavisen, Sektion 4 (Ideer), 5.

Ritter, C. D., Muñoz, J., Machado, A. F., Albert, J. S., Ribas, C. C., Carnaval, A. C., Ulloa, C. U., Carrillo, J. D., Tuomisto, H., Armenteras, D. & Guayasamin, J. M. (2025). Indigenous territories and protected areas are crucial for ecosystem connectivity in the Amazon basin. Proceedings of the National Academy of Sciences of the United States of America, 122(31), Article e2418189122. https://doi.org/10.1073/pnas.2418189122

Buldgen, G., Noels, A., Baturin, V. A., Christensen-Dalsgaard, J., Ayukov, S. V., Oreshina, A. V. & Scuflaire, R. (2025). Entropy proxy inversions as tracers of the evolution of physical conditions at the base of the solar convective envelope. Astronomy and Astrophysics, 700, Article A50. https://doi.org/10.1051/0004-6361/202555366

de Vos, J. M., Eggli, U., Nyffeler, R., Larridon, I., McGinnie, C., Epitawalage, N., Maurin, O., Forest, F. & Baker, W. J. (2025). Phylogenomics and classification of Cactaceae based on hundreds of nuclear genes. Plant Systematics and Evolution, 311(5), Article 28. https://doi.org/10.1007/s00606-025-01948-z

Dhanoa, V., Wolter, A. S., Molina León, G., Schulz, H.-J. & Elmqvist, N. (2025). Agentic Visualization: Extracting Agent-based Design Patterns from Visualization Systems. IEEE Computer Graphics and Applications, 45(6), 89-100. https://doi.org/10.1109/MCG.2025.3607741

Burattin, A., Miksch, S., Sadiq, S., Schulz, H.-J. & Vrotsou, K. (2025). VESPA: Visual Event-Stream Progressive Analytics. Paper presented at 2nd Visual Process Analytics Workshop (VIPRA'25), Seville, Spain. https://vipra-workshop.github.io/homepage/papers/BPM_2025_paper_280.pdf

Qi, K., Gong, C., Andresen, K. J., Zhou, Y., Geng, Y. & Bouchakour, M. (2025). Sea-level controls on terrigenous sediment input to deep water of the Pearl River margin since the last glacial maximum. Sedimentary Geology, 486, Article 106939. https://doi.org/10.1016/j.sedgeo.2025.106939

Taylor, N. T., Pitfield, J., Davies, F. H. & Hepplestone, S. P. (2025). RAFFLE: active learning accelerated interface structure prediction. npj Computational Materials, 11(1), Article 258. https://doi.org/10.1038/s41524-025-01749-5

Vandvik, V., Halbritter, A. H., Macias-Fauria, M., Maitner, B. S., Michaletz, S. T., Telford, R. J., Bison, N., Chacon-Labella, J., Cotner, S., Egelkraut, D., Garen, J., Gaudard, J., Geange, S. R., Rosati, M. A., Andersen, E. A. S., Ahler, S. J., Atkinson, J., Baumane, M., Bradler, P. M. ... Enquist, B. J. (2025). Plant traits and associated ecological data from global change experiments and climate gradients in Norway. Scientific Data, 12(1), Article 1477. https://doi.org/10.1038/s41597-025-05509-4

Kjær, J. E., Baumane, M., Fredriksson, F., Jessen, S., Martinsen, K. T., Skjærlund, T., Norrild, A. K., Hansen, M. E. R., Sand-Jensen, K., Bruun, H. H. & Baastrup-Spohr, L. (2025). Effects of riparian wetland restoration and grazing on CH₄ and CO₂ exchange more than a decade after rewetting. Restoration Ecology, 33(8), Article e70185. https://doi.org/10.1111/rec.70185

Holleufer, S. F., Hopkinson, A. T., Sutherland, D. S., Li, Z., Lauritsen, J. V., Hornekær, L. & Cassidy, A. (2025). Silicon oxide nanoparticles grown on graphite by co-deposition of the atomic constituents. Physical Chemistry Chemical Physics, 27(26), 13906-13916. https://doi.org/10.1039/d5cp01089f

Kjær, J. B., Wegeberg, S., Sejr, M. K., Olesen, B., Marbà, N., Rasmussen, M. B., Blicher, M. E., Bruhn, A., Hansen, J. L. S., Linnebjerg, J. F. & Krause-Jensen, D. (2025). Grazing by sea urchins is a potential co-driver of Greenland kelp forest distribution. Limnology and Oceanography, 70(9), 2756-2766. https://doi.org/10.1002/lno.70150

Olesen, B., Marbà, N., Duarte, C. M. & Krause-Jensen, D. (2025). Long lifespan and substantial biomass production support stable high biomass of Ascophyllum nodosum under interannual climate fluctuations in Greenland. Journal of Phycology, 61(5), 1288-1305. https://doi.org/10.1111/jpy.70071

Nielsen, A. M. H. & Jensen, F. (2025). Minimal Basis Iterative Stockholder Decomposition with Ellipsoidal Atoms. Journal of Chemical Theory and Computation, 21(18), 8753-8761. https://doi.org/10.1021/acs.jctc.5c00788

Kubečka, J., Knattrup, Y., Trolle, G. B., Reischl, B., Lykke-Møller, A. S., Elm, J. & Neefjes, I. (2025). Thermodynamics of Molecular Binding and Clustering in the Atmosphere Revealed through Conventional and ML-Enhanced Umbrella Sampling. ACS Omega, 10(34), 39148-39161. https://doi.org/10.1021/acsomega.5c05634

Poderyte, M., Lima, R., Golbækdal, P. I., Juhl, D. W., Olesen, K. L., Nielsen, N. C., Lanza, A. & Lee, J.-W. (2025). Repurposing polyethylene terephthalate plastic waste to capture carbon dioxide. Science Advances, 11(36), 1-9. https://doi.org/10.1126/sciadv.adv5906

Ma, C., Dalby, F. R., Feilberg, A., Guldberg, L. B., Yu, J., Marzocchi, U. & Petersen, S. O. (2025). Enhanced methane oxidation in surface crusts of manure storages with controlled ventilation. Journal of Environmental Management, 393, Article 127214. https://doi.org/10.1016/j.jenvman.2025.127214

Britz, D. & Strutwolf, J. (2025). Comments on A. Eswari and L. Rajendran, “Mathematical Modeling of Cyclic Voltammetry for EC Reaction” in Russ. J. Electrochem. 47 (2011) 195 and “Mathematical Modeling of Cyclic Voltammetry for EC2 Reaction”, in Russ. J. Electrochem. 47 (2011) 205. Russian Journal of Electrochemistry, 61(6), 239–242. https://doi.org/10.1134/S1023193525700041

Sulas, F., Nicosia, C., Haase, K., Bjerregaard, M. M. & Kristiansen, S. M. (2025). Developer-Led Excavations, Geoarchaelogy & Bayesian Modelled Chronology of a Guild House and the Main Street at Medieval Odense. Norwegian Archaeological Review, 58(1), 44-70. https://doi.org/10.1080/00293652.2025.2515515

Ji, L., Kou, J., Wang, S., Xing, Z., Xin, Z., Skrydstrup, T. & Huang, Y. (2025). Octahedral Cs₂AgBiBr₆ Double Perovskite Microcrystals for C-C Coupling Reactions under Visible-Light Irradiation. Inorganic Chemistry, 64(36), 18401-18410. https://doi.org/10.1021/acs.inorgchem.5c02942

Mishra, A., Golbek, T. W., Zubia-Aranburu, J., Madzharova, F., Drace, T., Bøggild, A., Boesen, T., Saeed, K. H., Klausen, L. H., Dong, M., Roeters, S. J. & Weidner, T. (2025). Polystyrene Nanoplastic Contaminants Denature Human Apolipoprotein A-1. Nano Letters, 25(35), 13160-13165. https://doi.org/10.1021/acs.nanolett.5c02743

Rodriguez-Palomo, A., Jacobsen, M. S. B., Christensen, T. E. K., Jørgensen, M. R. V., Kantor, I., Willan, G., Herrel, A., Marghoub, A., Moazen, M., Evans, S., Vickaryous, M., Williams, C. J. A. & Birkedal, H. (2025). Enamel-like stiffness achieved by poorly oriented nanocrystals in the capping tissue of Mexican beaded lizard osteoderms. Acta Biomaterialia, 204, 457-469. https://doi.org/10.1016/j.actbio.2025.08.025

Knudsen, N. T. & Kristiansen, S. M. (2025). Indlandsisen, kvartærgeologi og landskab omkring Kangerlussuaq, Vestgrønland. AU Library Scholarly Publishing Services. https://doi.org/10.7146/aul.588

Garde, H., Johansson, D. & Zacharopoulos, T. (2025). Direct reconstruction of anisotropic self-adjoint inclusions in the Calderón problem. arxiv.org. https://arxiv.org/abs/2509.10994

Smetana, V., Bolla, G., Hiti, E. A., Wineinger, H., Mudring, A. V. & Rogers, R. D. (2025). Crystallographic Snapshots of Pre- and Post-Lanthanide Halide Hydrolysis─Reaction Products Captured by the 4-Amino-1,2,4-triazole Ligand. Crystal Growth and Design, 25(15), 6421-6428. https://doi.org/10.1021/acs.cgd.5c00835

Mohora, I., Patiño Guillén, G., Neis, K., Valero, J., Keyser, U. F. & Bošković, F. (2025). Programmable RNA Nanostructures Enable Nanopore Detection of Cotranscriptionally Introduced RNA Modifications. Nano Letters, 25(32), 12184-12192. https://doi.org/10.1021/acs.nanolett.5c02391

Rübeling, P., Marchukov, O. V., Bellotti, F. F., Hoff, U. B., Zinner, N. T. & Kues, M. (2025). In-situ training in programmable photonic frequency circuits. Nanophotonics, 14(16), 2779-2786. https://doi.org/10.1515/nanoph-2025-0125

Bro̷chner, B. V., Zhang, X., Nielsen, J., Kjems, J., Otzen, D. E. & Malle, M. G. (2025). Single-vesicle Tracking of α-Synuclein Oligomers Reveals Pore Formation by a Three-Stage Model. ACS Nano, 19(36), 32108-32122. https://doi.org/10.1021/acsnano.5c04005

Jakobsen, A. B., Clausen, A. B., van de Pol, J. & Shaik, I. (2025). Depth-Optimal Quantum Layout Synthesis as SAT. In J. Berg & J. Nordstrom (Eds.), 28th International Conference on Theory and Applications of Satisfiability Testing, SAT 2025 Article 16 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SAT.2025.16

Song, L., Zhang, J. & Iversen, B. B. (2025). Insight into decoupling of electrical and thermal transport in chain-like thermoelectric InTe single crystals through anisotropy. Acta Materialia, 299, Article 121480. https://doi.org/10.1016/j.actamat.2025.121480

Guo, J., Stroe, D. I., Adelhelm, P. & Bomholdt Ravnsbæk, D. (2025). Battery Aging Mechanisms Under Real-World Driving Conditions. Paper presented at Swiss Battery Days 2025, Zurich, Switzerland.

Shah, F. R., Peletier, R. F., Noel-Storr, J., Van Der Geest, D., Jurriens, T., Hänel, A., Hoffmann, T., Cordes, L., Will, R., Rietze, A. S., Gehlen, M., Kjeldsen, H., Nazzari, C. & Poppe, B. (2025). Beyond the clouds: advanced data analysis of a dutch sky quality meter network. Monthly Notices of the Royal Astronomical Society, 542(1), 272-292. https://doi.org/10.1093/mnras/staf1200

Shaik, I. & van de Pol, J. (2025). CNOT-Optimal Clifford Synthesis as SAT. In J. Berg, J. Nordstrom & J. Nordstrom (Eds.), 28th International Conference on Theory and Applications of Satisfiability Testing, SAT 2025 Article 28 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.SAT.2025.28

Giaveri, S., Abil, Z., Kohyama, S., Fu, M., Levrier, A., Adamala, K., Chinantuya, W., Dekker, C., Deng, N., Fredens, J., Hagino, K., Jahnke, K., Li, X., Lindner, A. B., Liu, C., Majumder, S., Noireaux, V., Schwille, P. & Westensee, I. N. (2025). Building a Synthetic Cell Together. Nature Communications, 16(1), Article 7488. https://doi.org/10.1038/s41467-025-62778-8