Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Wu, X., Wang, Z., Yang, F., Gao, R., Liang, C., Tey, M. K., Li, X., Pohl, T. & You, L. (2024). Dissipative time crystal in a strongly interacting Rydberg gas. Nature Physics, 20(9), 1389-1394. https://doi.org/10.1038/s41567-024-02542-9

Yang, D. Y., Shorter, K. A., Moore, M., Rocho-Levine, J., Wells, R. S., Barton, K. & Johnson, M. (2025). In vivo viscoelastic properties of cetacean integument: an experimental characterization. Marine Mammal Science, 41(1), Article e13153. https://doi.org/10.1111/mms.13153

Sitchinava, N. & Svenning, R. (2024). The All Nearest Smaller Values Problem Revisited in Practice, Parallel and External Memory. In SPAA '24: Proceedings of the 36th ACM Symposium on Parallelism in Algorithms and Architectures (pp. 259-268). Association for Computing Machinery. https://doi.org/10.1145/3626183.3659979

Ahrens, A., Batista, G. M. F., Hammershøj, H. C. D., Schwibinger, E. V., Nova, A. & Skrydstrup, T. (2024). Unveiling the mechanism of triphos-Ru catalysed C–O bond disconnections in polymers. Nature Communications, 15, Article 5656. https://doi.org/10.1038/s41467-024-50083-9

Pfeuffer, K., Gellersen, H. & Gonzalez-Franco, M. (2024). Design Principles and Challenges for Gaze + Pinch Interaction in XR. IEEE Computer Graphics and Applications, 44(3), 74-81. https://doi.org/10.1109/MCG.2024.3382961

Dalagnol, L. V. S., Kumar, S., Lozano, A. I., Bettega, M. H. F., Jones, N. C., Hoffmann, S. V., Souza Barbosa, A. & Limao-Vieira, P. (2024). Valence and Rydberg excitations of 4-fluorotoluene in the 4.3–10.8 eV photoabsorption energy region. Journal of Quantitative Spectroscopy & Radiative Transfer, 327, Article 109125. https://doi.org/10.1016/j.jqsrt.2024.109125

Bech, T. B., Donslund, B. S., Kristensen, S. K. & Skrydstrup, T. (2024). Chemical separation of polyurethane via acidolysis - combining acidolysis with hydrolysis for valorisation of aromatic amines. Green Chemistry, 26(14), 8395-8404. https://doi.org/10.1039/d4gc00819g

Andersen, L., Kisistók, J., Henriksen, T. V., Bramsen, J. B., Reinert, T., Øgaard, N., Mattesen, T. B., Birkbak, N. J. & Andersen, C. L. (2024). Exploring the biology of ctDNA release in colorectal cancer. European Journal of Cancer, 207, Article 114186. https://doi.org/10.1016/j.ejca.2024.114186

Hirsch, C. & Willhalm, D. (2024). Lower large deviations for geometric functionals in sparse, critical and dense regimes. Alea (Rio de Janeiro), 21(2), 923-962. https://doi.org/10.30757/ALEA.V21-38

Mamakhel, A., Kløve, M., Bondesgaard, M., Christiansen, T. L., Pedersen, S. U., Skibsted, J. & Iversen, B. B. (2024). Amphoteric SnO₂ nanoparticles via pH-controlled continuous flow solvothermal synthesis. Journal of Supercritical Fluids, 212, Article 106341. https://doi.org/10.1016/j.supflu.2024.106341

Garland, W., Rouvière, J. O. & Heick Jensen, T. (2024). Assigning function to an unexplored Integrator module. Molecular Cell, 84(13), 2405-2406. https://doi.org/10.1016/j.molcel.2024.06.014

Butcher, P. W. S., Batch, A., Saffo, D., Macintyre, B., Elmqvist, N. & Ritsos, P. D. (2024). Is Native Naïve? Comparing Native Game Engines and WebXR as Immersive Analytics Development Platforms. IEEE Computer Graphics and Applications, 44(3), 91-98. https://doi.org/10.1109/MCG.2024.3367422

Berti, A., D'Alessio, M., Bianchi, M., Bignardi, L., Lacovig, P., Sanders, C., Lizzit, S., Hofmann, P., Marrazzo, A. & Baraldi, A. (2024). Unraveling oxygen-driven surface segregation dynamics in platinum-gold alloys. Applied Surface Science, 670, Article 160577. https://doi.org/10.1016/j.apsusc.2024.160577

Soranzio, D., Puntel, D., Tuniz, M., Majchrzak, P. E., Milloch, A., Olsen, N. M., Bronsch, W., Jessen, B. S., Fainozzi, D., Pelli Cresi, J. S., De Angelis, D., Foglia, L., Mincigrucci, R., Zhu, X., Dean, C. R., Ulstrup, S., Banfi, F., Giannetti, C., Parmigiani, F. ... Cilento, F. (2024). Impact of MoS₂ Monolayers on the Thermoelastic Response of Silicon Heterostructures. ACS Applied Nano Materials, 7(13), 15317-15324. https://doi.org/10.1021/acsanm.4c02096

Adam, L., Kumar, R., Arroyo-Garcia, L. E., Molenkamp, W. H., Nowak, J. S., Klute, H., Farzadfard, A., Alkenayeh, R., Nielsen, J., Biverstål, H., Otzen, D. E., Johansson, J. & Abelein, A. (2024). Specific inhibition of α-synuclein oligomer generation and toxicity by the chaperone domain Bri2 BRICHOS. Protein Science, 33(8), Article e5091. https://doi.org/10.1002/pro.5091

Vindbæk, S. H., Ehrbar, S., Worm, E. S., Muren, L., Tanadini-Lang, S., Petersen, J. B. B., Balling, P. & Poulsen, P. R. (2024). Motion-induced dose perturbations in photon radiotherapy and proton therapy measured by deformable liver-shaped 3D dosimeters in an anthropomorphic phantom. Physics and Imaging in Radiation Oncology, 31, Article 100609. https://doi.org/10.1016/j.phro.2024.100609

Schizophrenia Working Group of the Psychiatric Genomics Consortium (2024). Distinguishing different psychiatric disorders using DDx-PRS. https://doi.org/10.1101/2024.02.02.24302228

Novikov, D. S., Jespersen, S. N., Kiselev, V. G. & Fieremans, E. (2016). Quantifying brain microstructure with diffusion MRI: Theory and parameter estimation.

Liu, C.-C. M. & Sheshmani, A. (2018). Stacky GKM Graphs and Orbifold Gromov-Witten Theory. https://arxiv.org/abs/1807.05697v1

Julku, A. J., Ding, S. & Bruun, G. (2023). An exciton interacting with a moire lattice -- polarons, strings, and optical probing of spin correlations. (2311.03482 ed.) https://doi.org/10.48550/arXiv.2311.03482

Autio, A., Garde, H., Hirvensalo, M. & Hyvönen, N. (2025). Linearization-based direct reconstruction for EIT using triangular Zernike decompositions. Inverse Problems and Imaging, 19(3), 456-478. https://doi.org/10.3934/ipi.2024040

Garza-Villarreal, E. A., Mallar, C., Hansen, B., Eskildsen, S. F., Devenyi, G. A., Castillo-Padilla, D., Balducci-Garcia, T., Reyes-Zamorano, E., Jespersen, S. N., Perez-Palacios, P., Patel, R. & Gonzalez-Olvera, J. J. (2016). The effect of crack cocaine addiction on the microstructure and morphology of the human striatum and thalamus using novel shape analysis and fast diffusion kurtosis imaging. (066647 ed.) https://doi.org/10.1101/066647

Ceausu, S., Borda-de-Água, L., Merckx, T., Sossai, E., Sapage, M., Miranda, M. & Pereira, H. M. (2018). High impact journals in ecology cover proportionally more significant findings. https://doi.org/10.1101/311068

Salasova, A., Degn, N. S., Paveliev, M., Madsen, N. K., Ovesen, P. L., Vestergaard , B., Udrea, A.-C., Kisiswa, L., Woloszczuková, L., Faress, I. M. G., Nabavi, S., Holm, M. M., Kjolby, M., Bølcho, U. & Nykjær, A. (2021). SorCS2 dynamically interacts with TrkB and GluN2B to control neurotransmission and Huntington's disease progression. https://doi.org/10.1101/2021.11.03.466767

Ahmed, I. A., Liu, J.-J., Gieniec, K. A., Bair-Marshall, C. J., Adewakun, A. B., Hetzler, B. E., Arp, C. J., Khatri, L., Vanwalleghem, G. C., Seidenberg, A. T., Cowin, P., Trauner, D., Chao, M. V., Davis, F. M., Tsien, R. W. & Froemke, R. C. (2022). Optopharmacological tools for precise spatiotemporal control of oxytocin signaling in the central nervous system and periphery. https://doi.org/10.1101/2022.11.10.516001

Charmouh, A. P., Bilde, T., Bocedi, G. & Duthie , A. B. (2023). A general model for the evolution of nuptial gift-giving. https://doi.org/10.1101/2023.01.11.523385

Vieira Macêdo, W., Poulsen, J. S., Vargas, S. R., Zaiat, M. & Nielsen, J. J. L. (2024). Integrated proteomic analysis reveals physiological changes during cometabolic degradation of Tetrabromobisphenol A (TBBPA) by Enterobacter cloacae strain ECsp1. International Biodeterioration & Biodegradation, 193, Article 105860. https://doi.org/10.1016/j.ibiod.2024.105860

Liu, A., Zheng, X., Schovsbo, N. H., Luo, Q., Zhong, N. & Sanei, H. (2024). Influence of thermal intrusion on the Alum Shale from south central Sweden. International Journal of Coal Geology, 290(104560), Article 104560. https://doi.org/10.1016/j.coal.2024.104560

Liu, A., Sanei, H., Schovsbo, N. H., Zheng, X. & Bian, L. (2023). Influence of Thermal Intrusion on Solid Bitumen in the Alum Shale, Central Sweden. Abstract from Joint 74th ICCP and 39th TSOP Meeting.

Vera-Puerto, I. L., Sarkar, S., Moris, G., Valdés, H., Quiroz, M., López, J., Encina, F., Molle, P. & Arias, C. A. (2024). First report of components responsible for odor sensation from a vertical flow constructed wetland treating combined sewer overflow. Environmental Science: Water Research and Technology, 10(9), 2013-2019. https://doi.org/10.1039/d4ew00303a

Morris, A. M., Lambart, S., Stearns, M. A., Bowman, J. R., Jones, M. T., Mohn, G., Andrews, G., Millett, J., Tegner, C., Chatterjee, S., Frieling, J., Guo, P., Jolley, D. W., Cunningham, E. H., Berndt, C., Planke, S., Alvarez Zarikian, C. A., Betlem, P., Brinkhuis, H. ... Clementi, V. J. (2024). Evidence for Low-Pressure Crustal Anatexis During the Northeast Atlantic Break-Up. Geochemistry, Geophysics, Geosystems, 25(7), Article e2023GC011413. https://doi.org/10.1029/2023GC011413

Nielsen, K. H. (2024). Selv verdens mest prestigefyldte pris skal pleje sit brand. Videnskab.dk.

Gutierrez, S., Greve, M. H., Møller, A. B., Beucher, A., Arthur, E., Normand, S., Wollesen de Jonge, L. & Gomes, L. D. C. (2024). A systematic benchmarking framework for future assessments of soil health: An example from Denmark. Journal of Environmental Management, 366, Article 121882. https://doi.org/10.1016/j.jenvman.2024.121882

Ciobotaru, C.-G. (2025). Dynamics of strongly I-regular hyperbolic elements on affine buildings. Transformation Groups. Advance online publication. https://doi.org/10.1007/s00031-025-09939-7

Baami González, X., Tran, J. D. & Sutherland, D. S. (2024). Versatile Nanoring Fabrication Assisted by Hole-mask Colloidal Lithography. ACS Applied Materials and Interfaces, 16(27), 35361-35371. https://doi.org/10.1021/acsami.4c07100

Jensen, E. B. V. (2021). Stereological inference on mean particle shape from vertical sections. Australian & New Zealand Journal of Statistics, 63(1), 6-18. https://doi.org/10.1111/anzs.12309

Stein, R. F., Nordlund, A., Collet, R. & Trampedach, R. (2024). The Stagger Code for Accurate and Efficient, Radiation-coupled Magnetohydrodynamic Simulations. Astrophysical Journal, 970(1), Article 24. https://doi.org/10.3847/1538-4357/ad4706

Utkina, A., Choi, J. H., Murray, A., Panin, A., Zaretskaya, N., Kurbanov, R. & Buylaert, J. P. (2024). Luminescence ages of sediments from the margin of the penultimate glaciation in the north-eastern East European plain. Quaternary Geochronology, 83, Article 101578. https://doi.org/10.1016/j.quageo.2024.101578

Laursen, M. R., Xu, W. & Møller, A. (2024). Reducing Static Analysis Unsoundness with Approximate Interpretation. Proceedings of the ACM on Programming Languages , 8, 1165-1188. https://doi.org/10.1145/3656424

Slavensky, A. M. & Hammer, B. (2024). Accelerating structure search using atomistic graph-based classifiers. Journal of Chemical Physics, 161(1), Article 014713. https://doi.org/10.1063/5.0207801

Lukyanycheva, M. S., Kurbanov, R. N., Taratunina, N. A., Vasilieva, A. N., Lytkin, V. M., Panin, A. V., Anoikin, A. A., Stevens, T., Murray, A. S., Buylaert, J. P. & Knudsen, M. F. (2024). Dating post-LGM aeolian sedimentation and the Late Palaeolithic in Central Yakutia (northeastern Siberia). Quaternary Geochronology, 83, Article 101563. https://doi.org/10.1016/j.quageo.2024.101563

Chakraborty, S., Sadler, B., Hoeflich, P., Hsiao, E. Y., Phillips, M. M., Burns, C. R., Diamond, T., Dominguez, I., Galbany, L., Uddin, S. A., Ashall, C., Krisciunas, K., Kumar, S., Mera, T. B., Morrell, N., Baron, E., Contreras, C., Stritzinger, M. D. & Suntzeff, N. B. (2024). Type Ia Supernova Progenitor Properties and their Host Galaxies. Astrophysical Journal, 969(2), Article 80. https://doi.org/10.3847/1538-4357/ad4702

Khemka, N., Morris, G., Kazemzadeh, L., Costard, L. S., Neubert, V., Bauer, S., Rosenow, F., Venø, M. T., Kjems, J., Henshall, D. C., Prehn, J. H. M. & Connolly, N. M. C. (2024). Integrative network analysis of miRNA-mRNA expression profiles during epileptogenesis in rats reveals therapeutic targets after emergence of first spontaneous seizure. Scientific Reports, 14(1), Article 15313. https://doi.org/10.1038/s41598-024-66117-7

Jackson, R., Dugmore, A. & Riede, F. (2024). Legacies of childhood learning for climate change adaptation. Global Environmental Change, 87, Article 102878. https://doi.org/10.1016/j.gloenvcha.2024.102878

Liu, D. S. K., Puik, J. R., Patel, B. Y., Venø, M. T., Vahabi, M., Prado, M. M., Webber, J. P., Rees, E., Upton, F. M., Bennett, K., Blaker, C., Immordino, B., Comandatore, A., Morelli, L., Sivakumar, S., Swijnenburg, R. J., Besselink, M. G., Jiao, L. R., Kazemier, G. ... Frampton, A. E. (2024). Unlocking the diagnostic power of plasma extracellular vesicle miR-200 family in pancreatic ductal adenocarcinoma. Journal of Experimental and Clinical Cancer Research, 43(1), Article 189. https://doi.org/10.1186/s13046-024-03090-z

Larsen, K. G., Pagh, R., Persiano, G., Pitassi, T., Yeo, K. & Zamir, O. (2024). Optimal Non-Adaptive Cell Probe Dictionaries and Hashing. In K. Bringmann, M. Grohe, G. Puppis & O. Svensson (Eds.), 51st International Colloquium on Automata, Languages, and Programming, ICALP 2024 Article 104 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ICALP.2024.104