Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Mortensen, U., Sunjevaric, I., Rothstein, R. & Bendixen, C. (1996). DNA strand annealing is promoted by the yeast Rad52 protein. Proceedings of the National Academy of Sciences (PNAS), 93, 10729-10734.

Nielsen, V. H., Bendixen, C. & Thomsen, B. (1996). APstI RFLP at the porcine gene encoding the catalytic alpha subunit of protein kinase CK2. Animal Genetics, 27, 373-374.

Larsen, N. J. & Nielsen, V. H. (1997). DNA sequence variation in the porcine growth hormone promotor region from Danish and Exotic pigs. Animal Biotechnology, 8(2), 151-166.

Nielsen, V. H. & Thomsen, B. (1997). PvuII RFLPs at SLA class II genes: DQA and DRA. Animal Genetics, 28, 151-152.

Koroleva, I. V., Malchenko, S. N., Brusgaard, K., Matyakhina, L. D., Colonin, M. G., Pack, S. D., Searle, J. B., Borodin, P. M., Serov, O. L. & Bendixen, C. (1996). Chromosome localization of the gene for ornithine transcarbomylase in the common shrew (Sorex araneus). Hereditas, 125, 239-241.

Kusk, M., Bendixen, C., Dunø, M., Westergaard, A. & Thomsen, B. (1996). Genetic dissection of intersubunit contacts within human protein kinase CK2. In Proceedings of the EMBL Meeting on Transcription (pp. 24-28)

Jakobsen, J. H., Madsen, P. & Jensen, J. (1996). Genetic parameters for performance traits on bulls and their daughters' yield. In Interbull Bulletin No.14, - Interbull Meeting

Jensen, J., Mäntysaari, E. A., Madsen, P. & Thompson, R. (1997). Residual Maximum Likelihood Estimation of (Co)Variance Components in Multivariate Mixed Linear Models using Average Information. Jour Ind Soc Ag Statistics, 49, 215-236.

Korsgaard, I. R. (1996). Genetic analysis of survival data - a Gibbs sampling approach. In Proceeding of the International Workshop on Genetic Improvement of Functional Traits in Cattle (Vol. 12, pp. 161-169)

Holm, L.-E. & Bendixen, C. (1996). Usefullness of microsatellites from the ISAG comparison test for parentage control in Danish Black and White cattle. In Animal Genetics 27, Suppl. 2 (pp. 21)

Jakobsen, J. H., Madsen, P., Pedersen, G. A., Petersen, P. H. & Jensen, J. (2000). Genetic correlations between beef traits measured on young performace test bulls and daughter milk yield. Acta Agriculturae Scandinavica, Section A - Animal Science, 50, 39-46.

Jakobsen, J. H., Madsen, P., Jensen, J., Pedersen, G. A. & Petersen, P. H. (2000). Genetic Parameters for Average Daily Gain, Area of M. Longissimus Dorsi, Feed Efficiency and Feed intake Capacity in Young Bulls of Dairy Populations. Acta Agriculturae Scandinavica, Section A - Animal Science, 50, 146-152.

Korsgaard, I. R., Madsen, P. & Jensen, J. (1998). Bayesian Inference in the semiparametric log normal frailty model using Gibbs sampling. Genetics Selection Evolution, 30, 241-256.

Pedersen, J., Jensen, J. & Madsen, P. (1995). Evaluation of calving performance of Danish dairy sires. In Interbull Bulletin No. 11 of the Interbull Meeting

Boelling, D., Madsen, P. & Jensen, J. (1997). Influence of age on claw traits and disease in test bulls. In Book of Abstracts No. 3 of the 48th Annual Meeting EAAP (pp. 73)

Nielsen, V. H. & Larsen, N. J. (1997). A PstI RFLP at the porcine POU domain class 1 transcription factor 1 (POU1F1) gene. Animal Genetics, 28, 320.

Nielsen, V. H. & Larsen, N. J. (1997). A three-allele PstI RFLP at the porcine glucocorticoid receptor (GRL) gene. Animal Genetics, 28, 150-151.

Larsen, N. J. & Nielsen, V. H. (1997). RFLPs at the porcine growth hormone releasing hormone (GHRH) gene. Animal Genetics, 28, 152.

Rohrer, G. A., Alexander, L. J., Beattie, C. W., Wilkie, P., Flickinger, G. H., Schook, L. B., Paszek, A. A., Andersson, L., Mariani, P., Marklund, L., Fredholm, M., Hoyheim, B., Archibald, A. L., Nielsen, V. H., Thomsen, B., Milan, D. & Groenen, M. A. M. (1997). A consensus linkage map for swine chromosome 7. Animal Genetics, 28, 223-229.

Nielsen, V. H. & Larsen, N. J. (1997). A DraI RFLP at the porcine insulin-like growth factor binding protein 3 (IGFBP3) gene. Animal Genetics, 28, 152-153.

Højsgaard, S. (1996). Learning structures from data and experts. Mathematics and Computers in Simulation, 42, 143-152.

Jørgensen, B., Labouriau, R. & Lundbye-Christensen, S. (1996). Linear Growth curve analysis based on exponential dispersion models. Journal of the Royal Statistical Society, Series A (Statistics in Society), B 58(3), 573-592.

Kristensen, K. & Ersbøll, A. K. (1995). The use of geostatistical methods in variety trials, where some varieties are unreplicated. In Biuletyn Oceny Odmian (Cultivar testing Bulletin) (Vol. 26-27, pp. 113-122)

Dethlefsen, C. & Jørgensen, E. (1996). A longitudinal model for litter size with variance components and random dropout.

Kristensen, K., Simmelsgaard, S. E., Djurhuus, J. & Olesen, S. E. (1995). Spatial Variability of Soil Physical and Chemical Parameters. In S. E. Olesen (Ed.), SP Report (Vol. 26, pp. 39-55)

Rasmussen, I. A., Kristensen, K. & Stetter, S. (1995). Growing malting barley without the use of pesticides. In BCPC Symposium Proceedings (Vol. 63, pp. 431-438)

Bibby, B. M. & Sørensen, M. (1995). Martingale Estimation Functions for Discretely Observed Diffusion Processes. Bernoulli, 1(1), 17-39.

Jensen, K. H., Pedersen, L. J., Giersing Linder, A. M., Heller, K. E., Jørgensen, E. & Ladewig, J. (1995). Intermittent stress in pigs: Behavioural and pituitary-adrenocortical reactivity. Acta Agriculturae Scandinavica, Section A - Animal Science, 45, 276-285.

Pedersen, A. R. (1995). A New Approach to Maximum Likelihood Estimation for Stochastic Differential Equations Based on Discrete Observations. Scandinavian Journal of Statistics, 22(1), 55-71.

Kristensen, A. R. & Jørgensen, E. (1995). The application of Markov decision processes as a framework for decision support in animal production. In Proceedings of FACTs 95, Farm Animal Computer Technologies Conference (pp. 136-145)

Nordbo, E., Christensen, S. & Kristensen, K. (1995). Technik für die kleinräumige Bestandesführung. In Kuratorium für Technik und Bauwesen in der Landwirtschaft e.V (Vol. 214, pp. 102-115)

Pedersen, B. M., Ruby, V. & Jørgensen, E. (1995). Organisation and application of research and development in commercial pig herds: The Danish approach. In Proceedings of the Fifth Biennial Conference of the Australian Pig Science Association (APSA)

Pedersen, B. K., Ruby, V. & Jørgensen, E. (1995). Quality Evaluation of Equipment and Facilities. In Proceedings of the Animal Behavior and the Design of Live-stock and Poultry Systems International Conference (pp. 263-276)

Bibby, B. M. (1995). Analysis of a Tracer Experiment Based on Compartmental Diffusion Models.

Bibby, B. M. (1995). On Estimation in Compartmental Diffusion Models.

Debosz, K. & Kristensen, K. (1995). Spatial Covariability of N Mineralization and Textural Fractions in Two Agricultural Fields. Paper presented at Spatial Covariability of N Mineralization and Textural Fractions in Two Agricultural Fields.

Jørgensen, E., Kristensen, A. R. & Vestergaard, E.-M. (1995). Modelling of Respiratory Disease.

Kristensen, A. R. & Jørgensen, E. (1995). Applicational Perspectives of Recent Developments in Dynamic Programming Methods for Herd Management Support.

Udsen, C. L. & Højsgaard, S. (1995). Sædskiftets betydning for goldfodssyge og knækkefodssyge.

Debosz, K. & Ersbøll, A. (1994). A simple statistical model for predicting N mineralization during soil incubation. In J. J. Neetson & J. Hassink (Eds.), Proc. sympposium: Nitrogen mineralization in agricultural soils, Thema's, AB-DLO (pp. 231-239)

Skjøth, F., Lohi, O. & Thomas, A. W. (1994). Genetic models for the inheritance of the silver colour mutation of foxes. Genetics Research, 64, 11-18.

Andersen, H. H. & Højbjerre, M. (1994). Introduktion af Gibbs Sampling: Statusrapport.

Jørgensen, B., Labouriau, R. & Lundbye-Christensen, S. (1994). Linear growth curve analysis based on exponential dispersion models.

Kristensen, K. & Petersen, J. (1994). Statistiske modeller til beregning af værdital for ammoniumkvælstof i kvæggylle. SP-rapport No. 8

Sibbesen, E. & Skjøth, F. (1997). Tillage caused dispersion of soil in long-term field experiments. In Tillage Traslocation and Tillage Erosion Symposium in The 52nd Soil and Water Conservation Society Conference

Lund, M. S. & Jensen, C. S. (1998). Multivariate updating of genotypes in a Gibbs sampling algorithm of the mixed inheritance model. In Proc. 6th. WCGALP (Vol. 25, pp. 521-524)

Lund, M. S. & Jensen, C. S. (1999). Blocking Gibbs Sampling in the Mixed Inheritance Model using Grahp Theory. Genetics Selection Evolution, 31, 3-24. https://doi.org/10.1051/gse:19990101

Su, G., Sørensen, P. & Sorensen, D. (1997). Bayesian analyses of response to selection for body weight and feed conversion in broiler chickens using gibbs sampling. In Proceeding of 3rd European Poultry Breeders Roundtable (pp. 51-62)

Madsen, P. & Larsen, M. (1998). Parallel Computing and Biometrical Genetics.

Madsen, P. & Larsen, M. (1998). A parallel solver for multi-trait animal models. In Proceedings of the Interbull Meeting - Interbull Bulletin (Vol. 17, pp. 96-99)

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Svenning, J.-C., Fløjgaard, C., A. Marske, K., Nógues-Bravo, D. & Normand, S. (2011). Applications of species distribution modeling to paleobiology. Quaternary Science Reviews, 30(21-22), 2930-2947. https://doi.org/10.1016/j.quascirev.2011.06.012

Suren, A., Kilroy, C., Lambert, P., Wech, J. & Sorrell, B. K. (2011). Are landscape-based wetland condition indices reflected by invertebrate and diatom communities? Wetlands Ecology and Management, 19, 73-88.

Cámara-Leret, R. & Veldkamp, J. F. (2011). A remarkable new Medinilla (Melastomataceae) from Celebes, Indonesia. Gardens' Bulletin, Singapore, 62(2), 213-221.

Scarcelli, N., Bernaud, A., Eiserhardt, W. L., Treier, U., Seveno, M., d'Anfray, A., Vigouroux, Y. & Pintaud, J.-C. (2011). A set of 100 chloroplast DNA primer pairs to study population genetics and phylogeny in monocotylenons. PLoS One, 6(5). https://doi.org/10.1371/journal.pone.0019954

Hoag, C. B. (2011). Assembling Partial Perspectives: Thoughts on the Anthropology of Bureaucracy: Symposium Commentary: Bureaucracy: Ethnography of the State in Everyday Life. PoLAR: Political and Legal Anthropology Review, 81-94. http://onlinelibrary.wiley.com/doi/10.1111/j.1555-2934.2011.01140.x/full

Overgaard, J., Hoffmann, A. A. & Kristensen, T. N. (2011). Assessing population and environmental effects on thermal resistance in Drosophila melanogaster using ecologically relevant assays. Journal of Thermal Biology, 36, 409-416. https://doi.org/10.1016/j.jtherbio.2011.07.005

Hylleberg, J. (2011). A Synoptical Classification of the Bivalvia (MOLLUSCA). University of Kansas. Paleontological Contributions. New Series, oktober/20(4).

Lefevre, S., Huong, D. T. T., Ha, N. T. K. & Bayley, M. (2011). A telemetry study of swimming depth and oxygen level in a Pangasius pond in the Mekong Delta. Aquaculture, 315, 410-413. https://doi.org/10.1016/j.aquaculture.2011.02.030

Iversen, N. K., Huong, D. T. T., Bayley, M. & Wang, T. (2011). Autonomic control of the heart in the Asian swamp eel (Monopterus albus). Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 158(4), 485-489. https://doi.org/10.1016/j.cbpa.2010.12.004

Carstensen, D. W. (2011). Avian biogeography and community ecology on oceanic islands. Det Naturvidenskabelige Fakultet, Aarhus Universitet.

Finger, A., Kettle, C. J., Kaiser-Bunbury, C. N., Ghazoul, J., Valentin, T., Matatiken, D. & Doudee, D. (2011). Back from the brink: Potential for genetic rescue in a critically endangered tree. Molecular Ecology, 20(18), 3773-3784. https://doi.org/10.1111/j.1365-294X.2011.05228.x

Kristiansen, A., Pedersen, K. H., Nielsen, P. H., Nielsen, L. P., Nielsen, J. L. & Schramm, A. (2011). Bacterial community structure of a full-scale biofilter treating pig house exhaust air. Systematic and Applied Microbiology, 34, 344-352. https://doi.org/10.1016/j.syapm.2010.11.022

Schauer, R., Røy, H., Augustin, N., Gennerich, H.-H., Peters, M., Wenzhoefer, F., Amann, R. & Meyerdierks, A. (2011). Bacterial sulfur cycle shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field. Environmental Microbiology, 13(10), 2633-48.

Ward, J., Jarvis, S., Moretti, D., Morrissey, R., Dimarzio, N., Johnson, M., Tyack, P., Thomas, L. & Marques, T. (2011). Beaked whale (Mesoplodon densirostris) passive acoustic detection in increasing ambient noise. Journal of the Acoustical Society of America, 129(2), 662-669. https://doi.org/10.1121/1.3531844

Bundgaard, J. (2011). Behov for evaluering af ledelse og administration på AU. UNIvers, 10, 7.

Krause-Jensen, D., Marbà, N., Olesen, B., Christensen, P. B., Sejr, M. K., Rodrigues, J. & Rysgaard, S. (2011). Benthic marine vegetation in Greenland - response to climate forcing. Abstract from Arctic Frontiers 2011, Tromsø, Norway. http://www.arcticfrontiers.com/index.php?option=com_docman&task=cat_view&gid=179&Itemid=306&lang=en

Knudsen, H., Markager, S. S. & Søndergaard, M. (2011). Bioavailability of autochthonous dissolved organic nitrogen in marine plankton communities. Poster session presented at ASLO 2011, Aquatic Sciences Meeting, San Juan, Puerto Rico. http://aslo.org/meetings/sanjuan2011/files/asm2011-abs-web.pdf

Nielsen, M. B. (2011). Biodegradation of p-nitrophenol and characterization of the microbial community in the Breakwater 42 waste dump. Det Naturvidenskabelige Fakultet, Aarhus Universitet.

Baattrup-Pedersen, A., Kristensen, E. A., Wiberg-Larsen, P. & Riis, T. (2011). Biodiversitet i vandløb: Op- og nedture gennem de seneste 100 år. Abstract from Biodiversitetssymposium 2011, Aarhus, Denmark.

Rothe, N., Gooday, A. J., Cedhagen, T. & Hughes, J. A. (2011). Biodiversity and distribution of the genus Gromia (Protista, Rhizaria) in the deep Weddell Sea (Southern Ocean). Polar Biology, 34, 69-81.

Bruhn, A., Dahl, J., Nielsen, H. B., Nikolaisen, L., Rasmussen, M. B., Markager, S., Olesen, B., Arias, C. & Jensen, P. D. (2011). Bioenergy potential of Ulva lactuca: Biomass yield, methane production and combustion. Bioresource Technology, 102(3), 2595-2604. https://doi.org/10.1016/j.biortech.2010.10.010

Tang, L. (2011). Biofilm formation on abiotic surfaces: The role of surface properties and extracellular DNA.

Tang, L., Pillai, S., Revsbech, N. P., Schramm, A., Bischoff, C. & Meyer, R. L. (2011). Biofilm retention on surfaces with variable roughness and hydrophobicity. Biofouling, 27(1), 111-121.

Nielsen, L. P., Risgaard-Petersen, N. & Fossing, H. (2011). Biogeochemical effects of natural electric currents in marine sediment. Abstract from ISME 13 - 13th International Symposium on Microbial Ecology, Seattle, WA, United States.

Dalsgaard, T., Thamdrup, B., Canfield, D., DeBrabandere, L., Revsbech, N. P. & Ulloa, O. (2011). Biogeochemistry of the eastern tropical south Pacific oxygen minimum zone. Abstract from European Geosciences Union, General Assembly 2011, Wien, Austria.

Pfeffer, C., Risgaard-Petersen, N. & Nielsen, L. P. (2011). Biogeoelectric networks in marine sediments – a ‘first cut’ study. Poster session presented at Goldschmidt Conference, Prague, Czech Republic.

Olesen, B., Krause-Jensen, D., Marbà, N. & Christensen, P. B. (2011). Biomass and production of sub-arctic eelgrass (Zostera marina) meadows in Greenland. Poster session presented at 21st Biennial Conference of the Coastal and Estuarine Research Federation , Daytona Beach, United States. http://www.sgmeet.com/cerf2011/

Marbà, N., Krause-Jensen, D., Olesen, B. & Christensen, P. B. (2011). Biomass and productivity of Arctic and Sub-Arctic Ascophyllum nodosum populations. Paper presented at 21st Biennial Conference of the Coastal and Estuarine Research Federation , Daytona Beach, United States. http://www.sgmeet.com/cerf2011

Holmstrup, M., Sørensen, J. G., Overgaard, J., Bayley, M., Bindesbøl, A.-M. H., Slotsbo, S., Fisker, K. V., Maraldo, K., Waagner, D., Labouriau, R. & Asmund, G. (2011). Body metal concentrations and glycogen reserves in earthworms (Dendrobaena octaedra) from contaminated and uncontaminated forest soil. Environmental Pollution, 159(1), 190-197. https://doi.org/10.1016/j.envpol.2010.09.005

Isaac, N. J. B., Girardello, M., Brereton, T. M. & Roy, D. B. (2011). Butterfly abundance in a warming climate: Patterns in space and time are not congruent. Journal of Insect Conservation, 15(1), 233-240. https://doi.org/10.1007/s10841-010-9340-0

Cordon, M. S., Wang, T., Speakman, J. & Hoppeler, H. (2011). Call for symposia nominations at the 2013 IUPS Congress. Journal of Experimental Biology. https://doi.org/10.1242/jeb.061028

Jensen, F. H., Marrero Perez, J., Johnson, M., Aguilar Soto, N. & Madsen, P. T. (2011). Calling under pressure: Short-finned pilot whales make social calls during deep foraging dives. Proceedings of the Royal Society B: Biological Sciences, 278(1721), 3017-25. https://doi.org/10.1098/rspb.2010.2604

Rasmussen, C. & Michener, C. D. (2011). Callosphecodes, a little-known bee (Hymenoptera, Halictidae, Sphecodes). ZooKeys, 127, 61-68.

Sarup, P. M., Sørensen, J. G., Kristensen, T. N., Hoffmann, A. A., Loeschcke, V., Paige, K. N. & Sørensen, P. (2011). Candidate Genes Detected in Transcriptome Studies are Strongly Dependent on Genetic Background. PLoS One, 6(1), 1-5. https://doi.org/10.1371/journal.pone.0015644

Rasmussen, C. & Lamas, G. (2011). Catalog of entomological types in the Museo Nacional de Historia Natural (MUSM), Lima, Perú: Hymenoptera. Revista Peruana de Entomologia, 46, 51-58.

Jensen, B., Larsen, C. K., Møller Nielsen, J., Simonsen, L. S. & Wang, T. (2011). Change of cardiac function, but not form, in postprandial pythons. Comparative Biochemistry and Physiology -Part A : Molecular and Integrative Physiology, 160(1), 35-42. https://doi.org/10.1016/j.cbpa.2011.04.018

Findsen, A. & Wang, T. (2011). Changes in blood flow patterns in crocodilians during digestion. Poster session presented at Annual meeting of Society of Experimental Biology, SEB, 2011, Glasgow, United Kingdom. http://sebiology.org/meetings/Past_Meetings/Glasgow_2011/Glasgow.html

Bertrand, R., Lenoir, J., Piedallu, C., de Ruffray, P., Vidal, C., Pierrat, J.-C. & Gégout, J.-C. (2011). Changes in plant community composition lag behind climate warming in lowland forests. Nature, 479(7374), 517–520. https://doi.org/10.1038/nature10548

Pakeman, R. J., Huband, S., Kriel, A. & Lewis, R. (2011). Changes in the Management of Scottish Machair Communities and Associated Habitats from the 1970s to the Present. Scottish Geographical Journal, 127(4), 267-287. https://doi.org/10.1080/14702541.2012.666262

Wahlberg, M., Beedholm, K., Heerfordt, A. & Møhl, B. (2011). Characteristics of biosonar signals from the northern bottlenose whale, Hyperoodon ampullatus. Acoustical Society of America. Journal, 130(5), 3077-3084. https://doi.org/10.1121/1.3641434

Demontis, D., D. Czarnomska, S., Hájková, P., Zemanová, B., Bryja, J., Loeschcke, V. & Pertoldi, C. (2011). Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra). Mammalian Biology, 76(5), 644-645. https://doi.org/10.1016/j.mambio.2010.10.004

Lund-Hansen, L. C., Nguyen, L., Doan, H., Enevoldsen, H., Ellegaard, M., Jensen, K. T., Nielsen, M. H., Andersen, T. J. & Larsen, J. (2011). Climate changes in a Vietnamese perspective.. Poster session presented at Invited speaker at Research Day on the occasion of the 40th year jubilee of diplomatic relations between Denmark and Vietnam, Hanoi, Viet Nam.

Sandel, B. S., Arge, L. A. & Svenning, J.-C. (2011). Climate change velocity since the Last Glacial Maximum and its importance for patterns of species richness and range size. Abstract from 5th biennial conference of the International Biogeography Society, Heraklion, Greece.

Svenning, J.-C., Fløjgaard, C. & Baselga, A. (2011). Climate, history and neutrality as drivers of mammal beta diversity in Europe: insights from multiscale deconstruction. Journal of Animal Ecology, 80, 393-402. https://doi.org/10.1111/j.1365-2656.2010.01771.x

Larsen, M. H., Jensen, K. T. & Mouritsen, K. N. (2011). Climate influences parasite-mediated competitive release. Parasitology, 138(11), 1436-1441. https://doi.org/10.1017/S0031182011001193

Odgaard, M. V., Bøcher, P. K., Dalgaard, T. & Svenning, J.-C. (2011). Climatic and non-climatic drivers of spatiotemporal maize-area dynamics across the northern limit for maize production: A case study from Denmark. Agriculture, Ecosystems & Environment, 142(3-4), 291-302. https://doi.org/10.1016/j.agee.2011.05.026

Knowles, P., Dotro, G., Nivala, J. & García, J. (2011). Clogging in subsurface-flow treatment wetlands: Occurrence and contributing factors. Ecological Engineering, 37(2), 99-112. https://doi.org/10.1016/j.ecoleng.2010.08.005

Knowles, P., Dotro, G., Nivala, J. A. & Carcía, J. (2011). Clogging in surface-flow treatment wetlands: Occurrence and contributing factors. Ecological Engineering, 37(2), 99-112. https://doi.org/10.1016/j.ecoleng.2010.08.005

Vlasáková, B. & Gustafsson, M. H. G. (2011). Clusia blattophila sp. nov. (Clusiaceae) from an inselberg in French Guiana. Nordic Journal of Botany, 29(2), 178-181. https://doi.org/10.1111/j.1756-1051.2011.01061.x

Carstensen, D. W., Sweeny, R., Ehlers, B. & Olesen, J. M. (2011). Coexistence and Habitat Preference of Two Honeyeaters and a Sunbird on Lombok, Indonesia. Biotropica, 43(3). https://doi.org/10.1111/j.1744-7429.2010.00715.x

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