Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Riis, B., Rattan, S., Palmquist, K., Clark, B. F. C. & Nygård, O. (1995). Dephosphorylation of the phosphorylated elongation factor-2 in the livers of calorie-restricted and freely-fed rats during ageing. Biochemistry and Molecular Biology International, 35, 855-859.

Alstrup, S., Brodal, G. S. & Rauhe, T. (2000). New data structures for orthogonal range searching. In 41st Annual Symposium on Foundations of Computer Science, 2000. Proceedings. (pp. 198-207). IEEE Computer Society Press. https://doi.org/10.1109/SFCS.2000.892088

Brodal, G. S. & Jakob, R. (2000). Dynamic Planar Convex Hull with Optimal Query Time and O(log n · log log n ) Update Time. In Algorithm Theory - SWAT 2000: 7th Scandinavian Workshop on Algorithm Theory Bergen, Norway, July 5–7, 2000 Proceedings (pp. 181-186). Springer. https://doi.org/10.1007/3-540-44985-X_7

Brodal, G. S. & Pedersen, C. N. S. (2000). Finding Maximal Quasiperiodicities in Strings. In R. Giancarlo & D. Sankoff (Eds.), Combinatorial Pattern Matching: 11th Annual Symposium, CPM 2000 Montreal, Canada, June 21–23, 2000 Proceedings (pp. 397-411). Springer. https://doi.org/10.1007/3-540-45123-4_33

Alstrup, S., Brodal, G. S. & Rauhe, T. (2000). Pattern matching in dynamic texts. In D. Shmoys (Ed.), Proceedings of the eleventh annual ACM-SIAM symposium on Discrete algorithms (pp. 819-828). Society for Industrial and Applied Mathematics.

Brodal, G. S. & Fagerberg, R. (1999). Dynamic Representations of Sparse Graphs. In F. Dehne, J.-R. Sack, A. Gupta & R. Tamassia (Eds.), Algorithms and Data Structures: 6th International Workshop, WADS’99 Vancouver, Canada, August 11–14, 1999 Proceedings (pp. 773-782). Springer. https://doi.org/10.1007/3-540-48447-7_34

Brodal, G. S. & Katajainen, J. (1998). Worst-case efficient external-memory priority queues. In S. Arnborg & L. Ivansson (Eds.), Algorithm Theory — SWAT'98: 6th Scandinavian Workshop on Algorithm Theory Stockholm, Sweden, July 8–10, 1998 Proceedings (pp. 107-118). Springer. https://doi.org/10.1007/BFb0054359

Brodal, G. S. & Pinotti, M. C. (1998). Comparator networks for binary heap construction. In S. Arnborg & L. Ivansson (Eds.), Algorithm Theory — SWAT'98: 6th Scandinavian Workshop on Algorithm Theory Stockholm, Sweden, July 8–10, 1998 Proceedings (pp. 158-168). Springer. https://doi.org/10.1007/BFb0054364

Brodal, G. S. (1998). Finger search trees with constant insertion time. In Proceedings of the ninth annual ACM-SIAM symposium on Discrete algorithms (pp. 540-549). Society for Industrial and Applied Mathematics.

Brodal, G. S. (1997). Predecessor queries in dynamic integer sets. In R. Reischuk & M. Morwan (Eds.), STACS 97: 14th Annual Symposium on Theoretical Aspects of Computer Science Lübeck, Germany February 27–March 1, 1997 Proceedings (pp. 21-32). Springer. https://doi.org/10.1007/BFb0023445

Brodal, G. S. & Gasieniec, L. (1996). Approximate dictionary queries. In D. Hirschberg & G. Myers (Eds.), Combinatorial Pattern Matching: 7th Annual Symposium, CPM 96 Laguna Beach, California, June 10–12, 1996 Proceedings (pp. 65-74). Springer. https://doi.org/10.1007/3-540-61258-0_6

Brodal, G. S. (1996). Worst-case efficient priority queues. In Proceedings of the seventh annual ACM-SIAM symposium on Discrete algorithms (pp. 52-58). Society for Industrial and Applied Mathematics.

Brodal, G. S. (1995). Fast meldable priority queues. In S. G. Akl, F. Dehne, J.-R. Sack & N. Santoro (Eds.), Algorithms and Data Structures: 4th International Workshop, WADS '95 Kingston, Canada, August 16–18, 1995 Proceedings (pp. 282-290). Springer. https://doi.org/10.1007/3-540-60220-8_70

Brodal, G. S. & Skyum, S. (1996). The Complexity of Computing the -ary Composition of a Binary Associative Operator. Department of Computer Science, Aarhus University. BRICS Report Series No. 96-42 http://www.brics.dk/RS/96/42/BRICS-RS-96-42.pdf

Brodal, G. S. & Husfeldt, T. (1996). A Communication Complexity Proof that Symmetric Functions have Logarithmic Depth. Department of Computer Science, Aarhus University. BRICS Report Series No. 96-1 http://www.brics.dk/RS/96/1/BRICS-RS-96-1.pdf

Nyord, T. & Kristensen, K. (2011). Analyse af ammoniakemission efter udspredning af svinegylle med 4 forskellige pH værdier.

Bentsen, I. B., Nielsen, I., Nielsen, H. B. N., Mundbjerg, K., Lisby, M., Andersen, A. H. & Bjergbæk, L. (2011). The MRX complex is required for replisome integrity as revealed from genomic loci with unidirectional replication. Poster session presented at Keystone Symposia, DNA replication and recombination, Keystone, Colorado, United States.

Nielsen, I., Bentsen, I. B., Lisby, M., Hansen, S., Jørgensen, N. L., Mundbjerg, K., Andersen, A. H. & Bjergbæk, L. (2010). A Flp-nick system to study repair of a single protein-bound nick in vivo. Poster session presented at Biological impact of alternatively structured DNA, FASEB summer research conference, Steamboat Springs, Colorado, United States.

Mundbjerg, K., Pedersen, J. M., Nielsen, I., Fredsøe, J. C., Christensen, H., Ingerslev, A. K., Jørgensen, S. W., Pedersen, L. H. & Andersen, A. H. (2010). The importance of DNA topoisomerases and DNA topology for genome and transcriptome maintenance. Poster session presented at MBI Annual Meeting 2010.

Kragh, H. (2011). Resisting the Bohr atom: The early British opposition. Physics in Perspective, 13(1), 4-35. https://doi.org/10.1007/s00016-010-0048-z

Kragh, H. (2011). The origin of the modern anthropic principle. Journal of Cosmology, 13.

Merte, L. R., Grabow, L. C., Peng, G., Knudsen, J., Zeuthen, H., Kudernatsch, W., Porsgaard, S., Lægsgaard, E., Mavrikakis, M. & Besenbacher, F. (2011). Tip-Dependent Scanning Tunneling Microscopy Imaging of Ultrathin FeO Films on Pt(111). Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 115(5), 2089-2099.

Mayntz, D., Sørensen, A., Møller, S. H., Jensen, S. K., Damgaard, B. M., Sandbøl, P. & Nielsen, V. H. (2011). Dissektion af fedtdepoter til estimering af totalfedt. In Faglig Årsberetning 2010 (pp. 107-111). Pelsdyrerhvervets Forsøgs- og ForskningsCenter.

Chen, X., Liu, H., Weinbauer, M., Chen, B. & Jiao, N. (2011). Viral Dynamics in the surface water of the Western South China Sea in summer 2007. Aquatic Microbial Ecology, 63, 145-160.

Sveegaard, S., Andreasen, H., Mouritsen, K. N., Jeppesen, J. P. & Teilmann, J. (2011). Is seasonal distribution of harbour porpoises linked to prey availability?. Abstract from Dansk Havpattedyrsymposium 2011, København, Denmark. http://www.havpattedyr.dk/wp-content/uploads/2011/02/DanishSeaMammalSym2011_Abstracts.pdf

Thomsen, K. (2011). On the C*-algebra of a locally injective surjection and its KMS states. Communications in Mathematical Physics, 302(2), 403-423. https://doi.org/10.1007/s00220-010-1168-7

Lühr, A. C., Hansen, D. C., Sobolevsky, N., Palmans, H., Rossomme, S. & Bassler, N. (2011). Fluence Correction Factors and Stopping Power Ratios for Clinical Ion Beams. Acta Oncologica, 50(6), 797-805. https://doi.org/10.3109/0284186X.2011.581691

Jensen, J. K., Dolmer, K. & Gettins, P. G. W. (2009). Specificity of binding of the low density lipoprotein receptor-related protein to different conformational states of the clade E serpins plasminogen activator inhibitor-1 and proteinase nexin-1. Journal of Biological Chemistry, 284(27), 17989-97. https://doi.org/10.1074/jbc.M109.009530

Jensen, J. K., Dolmer, K., Schar, C. & Gettins, P. G. W. (2009). Receptor-associated protein (RAP) has two high-affinity binding sites for the low-density lipoprotein receptor-related protein (LRP): consequences for the chaperone functions of RAP. Biochemical Journal, 421(2), 273-82. https://doi.org/10.1042/BJ20090175

Jensen, J. K. & Gettins, P. G. W. (2008). High-resolution structure of the stable plasminogen activator inhibitor type-1 variant 14-1B in its proteinase-cleaved form: a new tool for detailed interaction studies and modeling. Protein Science, 17(10), 1844-9. https://doi.org/10.1110/ps.036707.108

Lin, Z., Jiang, L., Yuan, C., Jensen, J. K., Zhang, X., Luo, Z., Furie, B. C., Furie, B., Andreasen, P. A. & Huang, M. (2011). Structural basis for recognition of urokinase-type plasminogen activator by plasminogen activator inhibitor-1. Journal of Biological Chemistry, 286(9), 7027-32. https://doi.org/10.1074/jbc.M110.204537

Dupont, D. M., Blouse, G. E., Hansen, M., Mathiasen, L., Kjelgaard, S., Jensen, J. K., Christensen, A., Gils, A., Declerck, P. J., Andreasen, P. A. & Wind, T. (2006). Evidence for a pre-latent form of the serpin plasminogen activator inhibitor-1 with a detached beta-strand 1C. Journal of Biological Chemistry, 281(47), 36071-81. https://doi.org/10.1074/jbc.M606851200

Jensen, J. K., Malmendal, A., Schiøtt, B., Skeldal, S., Pedersen, K. E., Celik, L., Nielsen, N. C., Andreasen, P. A. & Wind, T. (2006). Inhibition of plasminogen activator inhibitor-1 binding to endocytosis receptors of the low-density-lipoprotein receptor family by a peptide isolated from a phage display library. Biochemical Journal, 399(3), 387-96. https://doi.org/10.1042/BJ20060533

Skeldal, S., Larsen, J. V., Pedersen, K. E., Petersen, H. H., Egelund, R., Christensen, A., Jensen, J. K., Gliemann, J. & Andreasen, P. A. (2006). Binding areas of urokinase-type plasminogen activator-plasminogen activator inhibitor-1 complex for endocytosis receptors of the low-density lipoprotein receptor family, determined by site-directed mutagenesis. FEBS journal, 273(22), 5143-59. https://doi.org/10.1111/j.1742-4658.2006.05511.x

Blicher, M. E., Rasmussen, L. M., Sejr, M. K., Merkel, F. R. & Rysgaard, S. (2011). Abundance and energy requirements of eiders (Somateria spp.) suggest high predation pressure on macrobenthic fauna in a key wintering habitat in SW Greenland. Polar Biology, 34, 1105-1116. https://doi.org/10.1007/s00300-011-0968-3

Christensen, P. B., Egebo, L. A., Høgslund, S., Christensen, J. T. & Lyngsgaard, M. M. (2008). Kulstof og verdens klima (VirtuelGalathea 3). http://virtuelgalathea3.dk/projekt/kulstof-og-verdens-klima

Mads, B., Grøndahl, C., Brøndum, E. T., Wang, T., Aalkjær, C. & Hasenkam, J. M. (2011). Girafforskning når nye højder. Dyrlægen, 1, 20-22.

Foldbjerg, R., Beer, C., Sutherland, D. S. & Autrup, H. (2011). The toxicity of silver and silica nanoparticles in comparable human and mouse cell lines. Poster session presented at Society of Toxicology Annual Meeting, Washington DC, United States.

Larsen, K. & Bendixen, C. (2011). Isolation and Characterization of Porcine FBXO7. Abstract from 10th International Conference AD/PD, Barcelona, Spain.

Larsen, K. & Bendixen, C. (2011). Isolation and Characterization of Porcine FBXO7.

Frolova, L. Y., Simonsen, J. L., Merkulova, T. I., Litvinov, D. Y., Martensen, P. M., Rechinsky, V. O., Camonis, J. H., Kisselev, L. L. & Justesen, J. (1998). Functional expression of eukaryotic polypeptide chain release factors 1 and 3 by means of baculovirus/insect cells and complex formation between the factors. European Journal of Biochemistry, 256(1), 36-44. https://doi.org/10.1046/j.1432-1327.1998.2560036.x

Martensen, P. M., Søgaard, T. M. M., Gjermandsen, I. M., Buttenschøn, H. N., Rossing, A. B., Bonnevie-Nielsen, V., Rosada, C., Simonsen, J. L. & Justesen, J. (2001). The interferon alpha induced protein ISG12 is localized to the nuclear membrane. European Journal of Biochemistry, 268(22), 5947-54. https://doi.org/10.1046/j.0014-2956.2001.02545.x

Olsen, K. (2011). An upcoming project: Latitudinal life history pattern in Ischnura pumilio (Charpentier, 1825). Abstract from 30th Annual Conference of the GdO (Society of the German Odononatologists), Lübeck, Germany.

Chen, M. & Gothelf, K. V. (2008). Labeling of DNA via rearrangement of S-(2-Aminoethyl) Thiophosphates to N-(2-Mercaptoethyl)phosphoramidates. Organic & Biomolecular Chemistry, 6(5).

Chen, M., Jensen, S. K. & Gothelf, K. V. (2007). Rearrangement of S-(2-aminoethyl) thiophosphates to N-(2-mercaptoethyl)- phosphoramidates. European Journal of Organic Chemistry, 2007(35), 5826-5833. https://doi.org/10.1002/ejoc.200700646

Chen, M., Yanqing Li, Yinli Li, Yuhen Yao, Bo Liu & Xiangzhi Song and Mingdong Dong (2009). Two-dimensional scaffold layer formations on a solid surface through xanthan polysaccharide: Temperature effect. Colloids and Surfaces B: Biointerfaces, 74(1).

Mundbjerg, K., Nielsen, I., Bentsen, I. B., Lisby, M., Bjergbæk, L. & Andersen, A. H. (2011). Completion of unidirectional replication requires Top2 or Sgs1.

Olsen, K. (1997). Årsrapport 1995: Tipperne. Naturovervågning. Arbejdsrapport fra DMU No. 36

Olsen, K., Nielsen, H. H. & Amstrup, O. (2008). Spotless Starling Sturnus unicolor in Denmark. Dansk Ornitologisk Forenings Tidsskrift, 102(3), 298-300.

Larsen, K. E. & Bendixen, C. (2011). Sus scrofa G protein-regulated inducer of neurite outgrowth 2 (GPRIN2) mRNA, complete cds. GenBank Acess. No. JF262778. Dataset

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