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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Jensen, S., Kirkegaard, T., Pedersen, K. E., Busse, M., Preissner, K. T., Rodenburg, K. W. & Andreasen, P. A. (2002). The role of β-strand 5A residues of plasminogen activator inhibitor-1 in regulation of its latency transition and inhibitory activity by vitronectin. Biochim. Biophys. Acta., 1597, 301-310.
Jestin, J.-L., Kristensen, P. & Winter, G. (2000). A method for the selection of catalytic activity using the proximity effect. Angewandte Chemie International Edition, 38, 1124-1127.
Jestin, J.-L., Kristensen, P. & Winter, G. (2000). Eine Methode zur Selektion katalytischer Aktivität, die Phagendisplay und Nachbarschaftseffekte nutzt. Angewandte Chemie International Edition, 111, 1196-1200.
Johnsen, L. B., Poulsen, K., Kilian, M. & Petersen, T. E. (1999). Purification and cloning of a streptokinase from Streptococcus uberis. Infection and Immunity, 67, 1072-1078.
Justesen, J. (2002). Ledelse på et ″vådt″ institut. Information og Debat, 6.
Justesen, J. (2002). Niels Ole Kjeldgaard. Biozoom, (2), -.
Justesen, J., Hartmann, R. & Kjeldgaard, N. O. (2000). Gene structure and function of the 2′-5′-oligoadenylate synthetase family. Cellular and Molecular Life Sciences, 57, 1593-1612.
Jørgensen, J.-E., Grønlund, M., Pallisgaard, N., K., L., Marcker, K. A. & Jensen, E. Ø. (1999). A new class of plant homeobox genes is expressed in developmental regions of determinate symbiotic root nodules. Plant Mol. Biol., 40, 65-77.
Jørgensen, R., Carr-Schmid, A., Ortiz, P. A., Kinzy, T. G. & Andersen, G. R. (2002). Purification and crystallization of the yeast elongation factor eEF2. Acta Crystallographica Section D: Structural Biology, 58(4), 712-715.
Jørgensen, R., Ortiz, P. A., Carr-Schmid, A., Nissen, P., Kinzy, T. G. & Andersen, G. R. (2003). Two crystal structures demonstrate large conformational changes in the eukaryotic ribosomal translocase. Nat. Struct. Biol. ,10, 379-385.
Jørgensen, R., Yates, S. P., Teal, D. J., Nilsson, J., Prentice, G., Merrill, A. R. & Andersen, G. R. (2004). Crystal structure of ADP-ribosylated ribosomal translocase from Saccharomyces cerevisiae. Journal of Biological Chemistry, (279), 45919-45925.
Jørgensen, R. T., Søgaard, T. M. M., Rossing, A. B., Martensen, P. M. & Justesen, J. (2000). Identification and characterization of human mitochondrial tryptophanyl-tRNA synthetase. Journal of Biological Chemistry, 275, 16820-16826.
Kahns, S., Kalai, M., Diness Jakobsen, L., Clark, B. F. C., Jensen, P. H. & Vandenabeele, P. (2003). Caspase-1 and caspase-8 cleave and inactive cellular parkin. Journal of Biological Chemistry, 278, 23376-23380.
Kalli, K. R., Chen, B.-K., Bale, L. K., Gernand, E., Overgaard, M. T., Oxvig, C., Cliby, W. A. & Conover, C. A. (2004). Pregnancy-associated plasma protein-A (PAPP-A) expression and insulin-like growth factor binding protein-4 protease activity in normal and malignant ovarian surface epithelial cells. International Journal of Cancer, 110, 633-640.
Kandl, K. A., Munshi, R., Ortiz, P. A., Andersen, G. R., Kinzy, T. G. & Adams, A. E. (2002). Identification of a role for actin in translational fidelity in yeast. Mol. Genet. Genomics, 268(1), 10-18.
Kapranov, P., Jensen, T. J., Poulsen, C., de Bruijn, F. J. & Szczyglowski, K. (1999). A protein phosphatase 2C gene, LjNPP2C1, from Lotus japonicus, induced during root nodule development. Proceedings of the National Academy of Sciences (PNAS), 96, 1738-1743.
Karring, H., Mathu, S. G. J., Duin, V. J., Kraal.B., Clark, B. F. C. & Knudsen.C.R. (2003). Qbeta-phage resistance by deletion of the coiled-coil motif in elongation factor Ts. Journal of Biological Chemistry, 365, 669-676.
Karring, H., Mathu, S. G. J., van Duin, J., Clark, B. F. C., Kraal, B. & Knudsen, C. R. (2004). Qβ-Phage resistance by deletion of the coiled-coil motif in elongation factor Ts. Journal of Biological Chemistry, 279, 1878-1884.
Karring, H., Thøgersen, I. B., Klintworth, G. K., Enghild, J. J. & Møller-Pedersen, T. (2004). Proteomic analysis of the soluble fraction from human corneal fibroblasts with reference to ocular transparency. Mol. Cell. Proteomics, 3(7), 660-674.
Kashiwagi, M., Enghild, J. J., Gendron, C., Hughes, C., Caterson, B., Itoh, Y. & Nagase, H. (2003). Altered proteolytic activities of ADAMTS-4 expressed by C-terminal processing. Journal of Biological Chemistry, -.
Kashiwagi, M., Enghild, J. J., Gendron, C., Hughes, C., Caterson, B., Itoh, Y. & Nagase, H. (2004). Altered proteolytic activities of ADAMTS-4 expressed by C-terminal processing. Journal of Biological Chemistry, 279(11), 10109-10119.
Kasper, C., Lunn, M.-L., Liljefors, T., Gouaux, E., Jensen, J. E. & Kastrup, J. S. (2002). Structure of the GluR2 ligand binding core in complex with the agonist (S)-Des-Me-AMPA: Importance of isoxazole moiety and 5 substituent. FEBS Letters, 531, 173-178.
Khan, S. A., Lopez-Chua, C. A., Zhang, J., Fischer, L. W., Sørensen, E. S. & Denhardt, D. T. (2002). Soluble osteopontin inhibits apoptosis of adherent endothelial cells deprived of growth factors. J. Cell. Biochem., 85, 728-736.
Kjeldgaard, M. (2002). Another Worm in Translation. Structure, 10, 1154-1155.
Kjeldgaard, M., Fanchon, E. (Ed.), Geissler, E. (Ed.), Hodeau, J.-L. (Ed.), Regnard, J.-R. (Ed.) & Timmins, P. A. (Ed.) (2000). Electron density - calculation, modification and interpretation. In Structure and Dynamics of Macromolecules (pp. 79-101). Oxford University Press.
Kjems, J. & Askjær, P. (2000). HIV-1 Rev and its cellular partners. Advances in Pharmacology, 48, 251-298.
Knudsen, C., Wieden, H. J. & Rodnina, M. V. (2001). Importance of structural transitions of the switch II region for the functions of elongation factor Tu on the ribosome. Journal of Biological Chemistry, 276, 22183-22190.
Knudsen, C. R., Jadidi, M., Friis, I. & Mansilla, F. (2002). Application of the yeast two-hybrid system in molecular gerontology. Biogerontology, 3(4), 243-256.
Knudsen, C. R., Mansilla, F., Pedersen, G. N., Clark, B. F. C., Barciszewski, J. (Ed.) & Clark, B. F. C. (Ed.) (1999). RNA biochemistry and biotechnology. In Point mutants of elongation factor Tu from E. coli impaired in binding aminoacyl (pp. 169-193). NATO ASI Series, Kluwer Academic Publishers.
Kristensen, J. H., Bildsøe, H., Jakobsen, H. J. & Nielsen, N. C. (1999). Application of lie algebra to NMR spectroscopy. Progr. NMR Spectrosc, 34, 1-69.
Kristensen, J. H., Bildsøe, H., Jakobsen, H. J. & Nielsen, N. C. (1999). Separation of 2H MAS NMR spectra by two-dimensional spectroscopy. Journal of Magnetic Resonance, 139, 314-333.
Kristensen, P., Ravn, P., Jensen, K. B. & Hobolt Jensen, K. (2000). Applying phage technology in aging research. Biogerontology, 1, 67-78.
Kristensen, P. & Winter, G. (1999). A method for the selection of catalytic activity using the proximity effect. Angewandte Chemie International Edition, 38, 1124-1127.
Kristensen, T., Vang, S., Laustsen, P. G., Hald, S., Reinholdt, H., Pugdahl, K., Pedraza-Diaz, S., Hardre, R., Carrion, A. G. & Rasmussen, T. E. (2001). Insulin-regulated aminopeptidase (EC 3.4.11.3), a gluzincin aminopeptidase. Excerpta Medica, 1218, 275-282.
Kristensen, T., Rasmussen, T. E., Pedraza-Diaz, S., Hardré, R., Laustsen, P. G. & Carrion, A. G. (2000). Structure of the human oxytocinase/insulin-regulated aminopeptidase gene and localization to chromosome 5q21. In Conference Abstract (pp. 81-81)
Kromann, H., Krikstolaityte, S., A.J., A., Andersen, K., Jaroszewski, J. W., Krogsgaard-Larsen, P., Jensen, J. E. & Strømgard, K. (2002). Solid-phase syntesis of polyamine toxin analogs that are potent and selective antagonists of Ca2+-permeable AMPA receptors. J. Med. Chem., 45, 5745-5754.

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Comfort, C., Smith, K. A., McManus, M., Neuheimer, A. B., Sevadjian, J. S. & Ostrander, C. E. (2017). Observations of the Hawaiian mesopelagic boundary community in daytime and nighttime habitats using estimated backscatter. AIMS Geosciences.
Borregaard, M. K., Amorim, I. R., Borges, P. A. V., Cabral, J. S., Fernandez-Palacios, J. M., Field, R., Heaney, L. R., Kreft, H., Matthews, T. J., Olesen, J. M., Price, J., Rigal, F., Steinbauer, M. J., Triantis, K. A., Valente, L., Weigelt, P. & Whittaker, R. J. (2017). Oceanic island biogeography through the lens of the general dynamic model: Assessment and prospect. Biological Reviews, 92(2), 830-853. https://doi.org/10.1111/brv.12256
Brinkløv, S. & Warrant, E. (2017). Oilbirds. Current Biology, 27(21), R1145-R1147. https://doi.org/10.1016/j.cub.2017.08.071
Montserrat, F., Renforth, P., Hartmann, J., Leermakers, M., Knops, P. & Meysman, F. J. R. (2017). Olivine Dissolution in Seawater: Implications for CO2 Sequestration through Enhanced Weathering in Coastal Environments. Environmental Science & Technology, 51(7), 3960-3972. https://doi.org/10.1021/acs.est.6b05942
Weber, R. E., Jarvis, J. U. M., Fago, A. & Bennett, N. C. (2017). O2 binding and CO2 sensitivity in haemoglobins of subterranean African mole rats. Journal of Experimental Biology, 220(21), 3939-3948. https://doi.org/10.1242/jeb.160457
Balslev, H., Copete, J. C., Pedersen, D., Bernal, R., Galeano, G., Duque, Á., Berrio, J. C. & Sanchez, M. (2017). Palm diversity and abundance in the Colombian Amazon. In Forest structure, function, and dynamics in Western Amazonia (pp. 101-123). Wiley. https://doi.org/10.1002/9781119090670
Darja, I., Arias, C. A. & Griessler-Bulc, T. (2017). Performance of evaporative willow systems in first vegetation season. 78. Abstract from 7th International Symposium for Wetland Pollutant Dynamics and Control (WETPOL), Bozeman, Montana, United States. http://wetpol.org/wp-content/uploads/2017/08/BookofAbstracts_Website.pdf
Levis, C., Costa, F. R. C., Bongers, F., Pena-Claros, M., Clement, C. R., Junqueira, A. B., Neves, E. G., Tamanaha, E. K., Figueiredo, F. O. G., Salomao, R. P., Castilho, C. V., Magnusson, W. E., Phillips, O. L., Guevara, J. E., Sabatier, D., Molino, J. .-F., Lopez, D. C., Mendoza, A. M., Pitman, N. C. A. ... ter Steege, H. (2017). Persistent effects of pre-Columbian plant domestication on Amazonian forest composition. Science, 355(6328), 925-931. https://doi.org/10.1126/science.aal0157
Swenson, N. G., Weiser, M. D., Mao, L., Araujo, M. B., Diniz-Filho, J. A. F., Kollmann, J., Nogues-Bravo, D., Normand, S., Rodríguez, M. Á., García-Valdés, R., Valladares, F., Zavala, M. A. & Svenning, J.-C. (2017). Phylogeny and the prediction of tree functional diversity across novel continental settings. Global Ecology and Biogeography, 26(5), 553-562. https://doi.org/10.1111/geb.12559
Williams, C., James, L., Leite, C., Monteiro, D., Bertelsen, M. & Wang, T. (2017). Physiological effects of morphine administration in the South American Rattlesnake. Acta Physiologica, 219, 39-39. Article P-59. https://doi.org/10.1111/apha.12841
Steinbauer, M., Irl, S. D. H., González-Mancebo, J. M., Breiner , F. T., Hernández Hernández, R., Hopfenmüller, S., Kidane, Y., Jentsch, A. & Beierkuhnlein, C. (2017). Plant invasion and speciation along elevational gradients on the oceanic island La Palma, Canary Islands. Ecology and Evolution, 7(2), 771-779. https://doi.org/10.1002/ece3.2640
Blonder, B., Moulton, D. E., Blois, J., Enquist, B. J., Graae, B. J., Macias-Fauria, M., McGill, B., Nogue, S., Ordonez, A., Sandel, B. & Svenning, J.-C. (2017). Predictability in community dynamics. Ecology Letters, 20(3), 293-306. https://doi.org/10.1111/ele.12736
Rumeu, B., Devoto, M., Traveset, A., Olesen, J. M., Vargas, P., Nogales, M. & Heleno, R. (2017). Predicting the consequences of disperser extinction: richness matters the most when abundance is low. Functional Ecology, 31(10), 1910-1920. https://doi.org/10.1111/1365-2435.12897
Cordier, T., Esling, P., Lejzerowicz, F., Visco, J., Ouadahi, A., Martins, C., Cedhagen, T. & Pawlowski, J. (2017). Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning. Environmental Science & Technology, 51(16), 9118-9126. https://doi.org/10.1021/acs.est.7b01518
Santl-Temkiv, T., Rauter, U., Pilgaard, S., Tesson, I. S., Lange, R., Gunde-Cimerman, N., Svendsen, S., Massling, A. & Finster, K. (2017). Quantifying bioaerosols and proteinaceous ice nuclei that may impact atmospheric processes in the high Arctic. Poster session presented at Atmospheric Ice Nucleation conference, Leeds, United Kingdom.
Revsbech, I. G. & Fago, A. (2017). Regulation of blood oxygen transport in hibernating mammals. Journal of Comparative Physiology B: Biochemical, Systems, and Environmental Physiology, 187(5-6), 847-856. https://doi.org/10.1007/s00360-017-1085-6
Morville, T., Rosenkilde, M., Munch-Andersen, T., Andersen, P. R., Kjær Groenbæk, K., Helbo, S., Kristensen, M., Vigelsø Hansen, A., Mattsson, N., Rasmusen, H. K., Guadalupe Grau, A., Fago, A., Neigaard Hansen, C., Twelkmeyer, B., Løvind Andersen, J., Dela, F. & Wulff Helge, J. (2017). Repeated Prolonged Exercise Decreases Maximal Fat Oxidation in Older Men. Medicine and Science in Sports and Exercise, 49(2), 308-316. https://doi.org/10.1249/MSS.0000000000001107
Navarro, L. M., Marques, A., Proença, V., Ceausu, S., Gonçalves, B., Capinha, C., Fernandez, M., Geldmann, J. & Pereira, H. M. (2017). Restoring degraded land: contributing to Aichi Targets 14, 15, and beyond. Current Opinion in Environmental Sustainability, 29, 207-214. https://doi.org/10.1016/j.cosust.2018.03.014
Galetti, M., Pires, A. S., Brancalion, P. H. S. & Fernandez, F. A. S. (2017). Reversing defaunation by trophic rewilding in empty forests. Biotropica, 49(1), 5-8. https://doi.org/10.1111/btp.12407
Hoffmann, A., Sgrò, C. M. & Kristensen, T. N. (2017). Revisiting Adaptive Potential, Population Size, and Conservation. Trends in Ecology and Evolution (Reference Edition), 32(7), 506-517. https://doi.org/10.1016/j.tree.2017.03.012
Root-Bernstein, M., Guerrero-Gatica, M., Piña, L., Bonacic, C., Svenning, J.-C. & Jaksic, F. M. (2017). Rewilding-inspired transhumance for the restoration of semiarid silvopastoral systems in Chile. Regional Environmental Change, 17(5), 1381-1396. https://doi.org/10.1007/s10113-016-0981-8