Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Caragiannis, I., Shah, N. & Voudouris, A. A. (2022). The Metric Distortion of Multiwinner Voting. Proceedings of the AAAI Conference on Artificial Intelligence, 36(5), 4900-4907. https://doi.org/10.1609/aaai.v36i5.20419

Caragiannis, I., Christodoulou, G. & Protopapas, N. (2022). Truthful Aggregation of Budget Proposals with Proportionality Guarantees. Proceedings of the AAAI Conference on Artificial Intelligence, 36(5), 4917-4924. https://doi.org/10.1609/aaai.v36i5.20421

Braverman, V., Cohen-Addad, V., Jiang, S. H.-C., Krauthgamer, R., Schwiegelshohn, C., Toftrup, M. B. & Wu, X. (2022). The Power of Uniform Sampling for Coresets. In Proceedings - 2022 IEEE 63rd Annual Symposium on Foundations of Computer Science, FOCS 2022 (pp. 462-473). IEEE. https://doi.org/10.1109/FOCS54457.2022.00051

Barman, S., Khan, A., Shyam, S. & Sreenivas, K. V. N. (2022). Finding Fair Allocations under Budget Constraints. arxiv.org. https://doi.org/10.48550/arXiv.2208.08168

Caragiannis, I. & Fehrs, K. (2022). The Complexity of Learning Approval-Based Multiwinner Voting Rules. Proceedings of the AAAI Conference on Artificial Intelligence, 36(5), 4925-4932. https://doi.org/10.1609/aaai.v36i5.20422

Frank, M. & Reid, D. (2023). Dissecting symbiosis cell-by-cell. Molecular Plant, 16(2), 308-309. https://doi.org/10.1016/j.molp.2022.12.023

Hermanowski, P. & Piotrowski, J. A. (2023). Origin of glacial curvilineations by subglacial meltwater erosion: Evidence from the Stargard drumlin field, Poland. Earth Surface Processes and Landforms, 48(2), 282-294. https://doi.org/10.1002/esp.5485

Hermanowski, P. & Piotrowski, J. A. (2022). Spatial and temporal changes in the mode of till deformation under a palaeo-ice stream derived from micromorphological data. Paper presented at International Field Symposium Quaternary of the Eastern Baltic Region, INQUA Peribaltic Group, Riga, Latvia.

Adamczyk, A., Wysota, W., Piotrowski, J. A. & Weckwerth, P. (2022). EC2-05 Inventory of glacial curvilineations (GCLs) at the southern periphery of the last Scandinavian Ice Sheet. 63-63. Abstract from 35th Nordic Geological Winter Meeting, Reykjavik, Iceland.

Hermanowski, P. & Piotrowski, J. A. (2022). EC2-0 Microstructural proxies for porewater pressure fluctuations in a subglacial till under a palaeo-ice stream in NW Poland. Abstract from 35th Nordic Geological Winter Meeting, Reykjavik, Iceland.

Kalinska, E., Weckwerth, P., Alexanderson, H., Piotrowski, J. A. & Wysota, W. (2022). Dating a flood: the first attempt to determine the age of the outburst megadune deposits in NE Poland. Abstract from 10th International Conference on Geomorphology, Coimbre, Portugal. https://doi.org/10.5194/icg2022-177

Dugan, H. A., Doran, P. T., Grombacher, D., Auken, E., Bording, T., Foged, N., Foley, N., Mikucki, J., Virginia, R. A. & Tulaczyk, S. (2022). Brief communication: The hidden labyrinth: deep groundwater in Wright Valley, Antarctica. Cryosphere, 16(12), 4977-4983. https://doi.org/10.5194/tc-16-4977-2022

Damsgaard, A., Suckale, J. & Piotrowski, J. A. (2022). Simulated formation of grounding-zone wedges and implications for ice-sheet stability. EGU22-8007. Abstract from EGU General Assembly 2022, Vienna, Austria. https://doi.org/10.5194/egusphere-egu22-8007

Weckwerth, P., Wysota, W., Piotrowski, J. A., Krawiec, A., Chabowski, M., Kalinska, E. & Adamczyk, A. (2023). Megadunes and their sedimentary successions on the proximal part of the Augustów Sandur, NE Poland. Abstract from 10th International Conference on Geomorphology, Coimbre, Portugal. https://doi.org/10.5194/icg2022-61

Wysota, W., Adamczyk, A., Piotrowski, J. A. & Weckwerth, P. (2023). Glacial curvilineations (GCLs) at the southern periphery of the last Scandinavian Ice Sheet: distribution, morphological characteristics and origin. Abstract from 10th International Conference on Geomorphology, Coimbre, Portugal. https://doi.org/10.5194/icg2022-197

Jungdal-Olesen, G., Pedersen, V. K., Andersen, J. L., Gomez, N. & Mitrovica, J. X. (2023). Sea level response to late Pliocene-Quaternary erosion and deposition in Scandinavia. Quaternary Science Reviews, 301, Article 107938. https://doi.org/10.1016/j.quascirev.2022.107938

Simkin, M., Siniscalchi, L. & Yakoubov, S. (2022). On Sufficient Oracles for Secure Computation with Identifiable Abort. In C. Galdi & S. Jarecki (Eds.), Security and Cryptography for Networks - 13th International Conference, SCN 2022, Proceedings (pp. 494-515). Springer. https://doi.org/10.1007/978-3-031-14791-3_22

Ishai, Y., Patra, A., Patranabis, S., Ravi, D. & Srinivasan, A. (2022). Fully-Secure MPC with Minimal Trust. In Theory of Cryptography - 20th International Conference, TCC 2022, Proceedings (pp. 470–501). Springer. https://doi.org/10.1007/978-3-031-22365-5_17

Pierre-Ferre, S., Collins, B., Lukacsovich, D., Wen, SA., Chai, Y., Winterer, J., Auerbach, B., Li, M., Yan, J., Pedersen, L., Földy, C. & Brown, S. A. (2022). A single atypical phosphoswitch in specific SCN neurons gates winter seasonality in mice. Poster session presented at Society for Research on Biological Rhythms Biennial Conference, Amelia Island, Florida, United States.

Jensen, B. B., Hansen, T. M., Nielsen, L., Cordua, K. S., Tuxen, N., Tsitonaki, A. & Looms, M. C. (2022). Accounting for Modeling Errors in Linear Inversion of Crosshole Ground-Penetrating Radar Amplitude Data: Detecting Sand in Clayey Till. Journal of Geophysical Research: Solid Earth, 127(10), Article e2022JB024666. https://doi.org/10.1029/2022JB024666

Heidari, H., Madsen, R. B., Amini, H., Hansen, T. M., Emami-Niri, M. & Amini, N. (2023). Assessment of the impact of noise magnitude and bandwidth variations on a probabilistic inversion of reflection seismic data. Geophysical Prospecting, 71(3), 443-455. https://doi.org/10.1111/1365-2478.13312

Friis, E. M., Crane, P. R., Pedersen, K. R. & Marone, F. (2022). Synchrotron radiation X-ray tomographic microscopy datasets for multipartite and cupulate flowers from Early Cretaceous mesofossil floras of Virginia, USA. Dataset . https://doi.org/10.16907/721beb60-0db2-4875-93bb-5329d52f68ac

Song, P., Staulund, J., Qi, H., Thrane, L., Pedersen, M., Eijken, M., Jespersen, B. & Kjems, J. (2022). Ex-vivo mRNA therapy to predict kidney vitality during transplantation. Poster session presented at Danish RNA Society's 7th Annual Meeting, Aarhus, Denmark.

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scene 1. Preview, (216), 32-34. https://doi.org/10.1080/14432471.2022.2041319

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scene 2. Preview, (217), 31-32. https://doi.org/10.1080/14432471.2022.2057086

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scene 3. Preview, (218), 33-35. https://doi.org/10.1080/14432471.2022.2083801

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scene 4. Preview, (219), 31-32. https://doi.org/10.1080/14432471.2022.2103990

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scenes 5 & 6. Preview, (220), 30-32. https://doi.org/10.1080/14432471.2022.2127688

Christensen, N. B. (2022). Pivotal moments: Seven scenes from a geophysics adventure: Scene 7. Preview, (221), 34-37. https://doi.org/10.1080/14432471.2022.2149180

Staulund, J., Song, P., Qi, H., Thrane, L., Duedahl, P., Weiss, T., Moers, C., Keller, A. K., Nørregaard, R., Pedersen, M., Leuvenink, H., Kjems, J., Jespersen, B. & Eijken, M. (2022). Assessing the quality of donor kidneys during normothermic machine perfusion using nanoparticle-based vitality sensors. Abstract from 3rd ECTORS meeting, Rotterdam, Netherlands.

McLachlan, P. J., Khare, S. K., Grombacher, D., Larsen, J. J., Christensen, A. & Zamora Luria, J. C. (2022). On The Presence of Correlated Noise in Transient Electromagnetic (Tem) Monitoring Data. In NSG2022 28th European Meeting of Environmental and Engineering Geophysics (pp. 1-5). European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.202220119

Afshani, P., Iacono, J., Jayapaul, V., Karsin, B. & Sitchinava , N. (2022). Locality-of-Reference Optimality of Cache-Oblivious Algorithms. In 3rd Symposium on Algorithmic Principles of Computer Systems, (APOCS) (pp. 31 - 45). Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611977059.3

Książek, M., Goulas, T., Mizgalska, D., Rodríguez-Banqueri, A., Eckhard, U., Veillard, F., Waligórska, I., Benedyk-Machaczka, M., Sochaj-Gregorczyk, A. M., Madej, M., Thøgersen, I. B., Enghild, J. J., Cuppari, A., Arolas, J. L., de Diego, I., López-Pelegrín, M., Garcia-Ferrer, I., Guevara, T., Dive, V. ... Gomis-Rüth, F. X. (2023). A unique network of attack, defence and competence on the outer membrane of the periodontitis pathogen Tannerella forsythia. Chemical Science, 14(4), 869-888. https://doi.org/10.1039/d2sc04166a

Mann, H. M. R., Iosifidis, A., Jepsen, J. U., Welker, J. M., Loonen, M. J. J. E. & Høye, T. T. (2022). Automatic flower detection and phenology monitoring using time-lapse cameras and deep learning. Remote Sensing in Ecology and Conservation, 8(6), 765-777. https://doi.org/10.1002/rse2.275

Le, T., Dietz, F., Pfeuffer, K. & Alt, F. (2022). A Practical Method to Eye-Tracking on the Phone: Toolkit, Accuracy and Precision. In T. Doring, S. Boll, A. Colley, A. Esteves & J. Guerreiro (Eds.), Proceedings of MUM 2022, the 21st International Conference on Mobile and Ubiquitous Multimedia (pp. 182-188). Association for Computing Machinery. https://doi.org/10.1145/3568444.3568463

Abild Meyer, C., De Dios Andres, P., Brodszkij, E., Westensee, I. N., Lyons, J., Vaz, S. H. & Städler, B. (2023). Astrocytes in Paper Chips and Their Interaction with Hybrid Vesicles. Advanced Biology, 7(1), Article 2200209. https://doi.org/10.1002/adbi.202200209

de Dios Andres, P. & Städler, B. (2023). Micromotor-Assisted Keratinocytes Migration in a Floating Paper Chip. Small, 19(13), Article 2201251. https://doi.org/10.1002/smll.202201251

Shaik, I. & van de Pol, J. (2022). Classical Planning as QBF without Grounding. In A. Kumar, S. Thiebaux, P. Varakantham & W. Yeoh (Eds.), Proceedings of the 32nd International Conference on Automated Planning and Scheduling, ICAPS 2022 (pp. 329-337). AAAI Press. https://doi.org/10.1609/icaps.v32i1.19817

Seisenberger, M., ter Beek, M. H., Fan, X., Ferrari, A., Haxthausen, A. E., James, P., Lawrence, A., Luttik, B., van de Pol, J. & Wimmer, S. (2022). Safe and Secure Future AI-Driven Railway Technologies: Challenges for Formal Methods in Railway. In T. Margaria & B. Steffen (Eds.), Leveraging Applications of Formal Methods, Verification and Validation. Practice - 11th International Symposium, ISoLA 2022, Proceedings (pp. 246-268). Springer. https://doi.org/10.1007/978-3-031-19762-8_20

van de Pol, J. (2022). Exploring a Parallel SCC Algorithm: Using TLA ⁺ and the TLC Model Checker. In T. Margaria & B. Steffen (Eds.), Leveraging Applications of Formal Methods, Verification and Validation. Verification Principles - 11th International Symposium, ISoLA 2022, Proceedings (pp. 535-555). Springer. https://doi.org/10.1007/978-3-031-19849-6_30

André, É., Marinho, D., Petrucci, L. & van de Pol, J. (2022). Efficient Convex Zone Merging in Parametric Timed Automata. In S. Bogomolov & D. Parker (Eds.), Formal Modeling and Analysis of Timed Systems. FORMATS 2022 (pp. 200-218). Springer. https://doi.org/10.1007/978-3-031-15839-1_12

van de Pol, J. & Petrucci, L. (2021). On Completeness of Liveness Synthesis for Parametric Timed Automata (Extended Abstract). In M. Roggenbach (Ed.), Recent Trends in Algebraic Development Techniques - 25th International Workshop, WADT 2020, Revised Selected Papers (pp. 3-10). Springer Science and Business Media Deutschland GmbH. https://doi.org/10.1007/978-3-030-73785-6_1

Pauli, A. B., Derczynski, L. & Assent, I. (2022). Modelling Persuasion through Misuse of Rhetorical Appeals. In NLP4PI 2022 - 2nd Workshop on NLP for Positive Impact, Proceedings of the Workshop (pp. 89-100). Association for Computational Linguistics. https://pure.itu.dk/ws/portalfiles/portal/90392646/wokrshop_social_impact.pdf

Christiansen, V. R., Kiilerich, A. H. & Mølmer, K. (2023). Interactions of quantum systems with pulses of quantized radiation: From a cascaded master equation to a traveling mode perspective. Physical Review A, 107(1), Article 013706. https://doi.org/10.1103/PhysRevA.107.013706

Zhang, Y., Mu, W., Zhang, Y., He, X., Wang, Y., Ma, H., Zhu, T., Li, A., Hou, Q., Yang, W., Ding, Y., Ramakrishna, S. & Li, H. (2022). Recent Advances in Cardiac Patches: Materials, Preparations, and Properties. ACS Biomaterials Science and Engineering, 8(9), 3659-3675. https://doi.org/10.1021/acsbiomaterials.2c00348

Schwiegelshohn, C. & Sheikh-Omar, O. A. (2022). An Empirical Evaluation of k-Means Coresets. In S. Chechik, G. Navarro, E. Rotenberg & G. Herman (Eds.), 30th Annual European Symposium on Algorithms, ESA 2022 (pp. 84:1-84:17). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ESA.2022.84

Theocharidis, K., Terrovitis, M., Skiadopoulos, S. & Karras, P. (2022). A Content Recommendation Policy for Gaining Subscribers. In SIGIR 2022 - Proceedings of the 45th International ACM SIGIR Conference on Research and Development in Information Retrieval (pp. 2501-2506). Association for Computing Machinery. https://doi.org/10.1145/3477495.3531885

Ganesh, C., Khoshakhlagh, H., Kohlweiss, M., Nitulescu, A. & Zając, M. (2022). What Makes Fiat–Shamir zkSNARKs (Updatable SRS) Simulation Extractable? In C. Galdi & S. Jarecki (Eds.), Security and Cryptography for Networks (pp. 735-760). Springer. https://doi.org/10.1007/978-3-031-14791-3_32

Jørgensen, B. B. (2021). Sulfur Biogeochemical Cycle of Marine Sediments. Geochemical Perspectives, 10(2), 145-307. https://doi.org/10.7185/geochempersp.10.2

Ganesh, C., Khoshakhlagh, H. & Parisella, R. (2022). NIWI and New Notions of Extraction for Algebraic Languages. In C. Galdi & S. Jarecki (Eds.), Security and Cryptography for Networks. SCN 2022 (pp. 687-710). Springer. https://doi.org/10.1007/978-3-031-14791-3_30

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