Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Green, S., Andersen, H., Danielsen, K., Emmeche, C., Joas, C., Johansen, M. W., Nagayoshi, C., Witteveen, J. & Sørensen, H. K. (2021). Adapting practice-based philosophy of science to teaching of science students. European Journal for Philosophy of Science, 11(3), Article 75. https://doi.org/10.1007/s13194-021-00393-2

Thorup, C., Petro, C., Bøggild, A., Ebsen, T. S., Brokjær, S., Nielsen, L. P., Schramm, A. & Bjerg, J. J. (2021). How to grow your cable bacteria: Establishment of a stable single-strain culture in sediment and proposal of Candidatus Electronema aureum GS. Systematic and Applied Microbiology, 44(5), Article 126236. https://doi.org/10.1016/j.syapm.2021.126236

Lustermans, J., Bjerg, J. J., Schramm, A. & Marshall, I. P. G. (2021). Phyllobacterium Calauticae Sp. Nov. Isolated From a Microaerophilic Veil Transversed by Cable Bacteria in Freshwater Sediment. Research Square. https://doi.org/10.21203/rs.3.rs-731961/v1

Stock, S. R., Park, J. S., Jakus, A., Birkbak, M., Frølich, S., Birkedal, H., Shah, R. & Almer, J. D. (2021). In situ loading and x-ray diffraction quantification of strains in hydroxyapatite particles within a 3D printed scaffold. Materialia, 18, Article 101174. https://doi.org/10.1016/j.mtla.2021.101174

Giacomozzi, L., Kjær, C., Brøndsted Nielsen, S., Ashworth, E. K., Bull, J. N. & Stockett, M. H. (2021). Non-statistical fragmentation in photo-activated flavin mononucleotide anions. Journal of Chemical Physics, 155(4), Article 044305. https://doi.org/10.1063/5.0056415

Mulder, F. A. A. (2021). NMR spectroscopy charges into protein surface electrostatics. Proceedings of the National Academy of Sciences (PNAS), 118(30), Article 2110176118. https://doi.org/10.1073/pnas.2110176118

Sarangi, S. & Nielsen, A. E. B. (2021). Effect of coordination on topological phases on self-similar structures. Physical Review B, 104(4), Article 045147. https://doi.org/10.1103/PhysRevB.104.045147

Jensen, O. N., Beyer, M., Sørensen, M. K., Kreimeyer, M. & Nielsen, N. C. (2021). Fast and accurate quantification of nitrogen and phosphorus constituents in animal slurries using NMR sensor technology. ACS Omega, 6(27), 17335-17341. https://doi.org/10.1021/acsomega.1c01441

Nielsen, B. B., Torp, M. T. & Møller, A. (2021). Modular call graph construction for security scanning of Node.js applications. In C. Cadar & X. Zhang (Eds.), ISSTA 2021 - Proceedings of the 30th ACM SIGSOFT International Symposium on Software Testing and Analysis (pp. 29-41). Association for Computing Machinery. https://doi.org/10.1145/3460319.3464836

Leiva, A. M., Gutierrez, E., Arias, C. A. & Vidal, G. (2021). Influence of water quality parameters on the removal of triclosan and ibuprofen in vertical subsurface flow constructed wetlands using multivariate analysis. Environmental Technology and Innovation, 24, Article 101846. https://doi.org/10.1016/j.eti.2021.101846

Bellinger, E. P., Basu, S., Hekker, S., Christensen-Dalsgaard, J. & Ball, W. H. (2021). Asteroseismic Inference of the Central Structure in a Subgiant Star. Astrophysical Journal, 915(2), Article 100. https://doi.org/10.3847/1538-4357/ac0051

Barbarino, C., Sollerman, J., Taddia, F., Fremling, C., Karamehmetoglu, E., Arcavi, I., Gal-Yam, A., Laher, R., Schulze, S., Wozniak, P. & Yan, L. (2021). Type Ic supernovae from the (intermediate) Palomar Transient Factory. Astronomy and Astrophysics, 651, Article A81. https://doi.org/10.1051/0004-6361/202038890

Annenkov, D., Milo, M., Nielsen, J. B. & Spitters, B. (2021). Extracting functional programs from Coq, in Coq. ArXiv. https://doi.org/10.48550/arXiv.2108.02995

Toft-Vandborg, C., Parthenopoulos, A., Darki, A. A. & Dantan, A. R. (2021). Collimation and finite-size effects in suspended resonant guided-mode gratings. Journal of the Optical Society of America A, 38(11), 1714-1725. https://doi.org/10.1364/JOSAA.440215

Khanahmadi, M. & Mølmer, K. (2021). Guessing the outcome of separate and joint quantum measurements of noncommuting observables. Physical Review A, 104(2), Article 022204. https://doi.org/10.1103/PhysRevA.104.022204

Trojan, D., Garcia-Robledo, E., Meier, D. V., Hausmann, B., Revsbech, N. P., Eichorst, S. A. & Woebken, D. (2021). Microaerobic lifestyle at nanomolar o2 concentrations mediated by low-affinity terminal oxidases in abundant soil bacteria. mSystems, 6(4), Article e00250-21. https://doi.org/10.1128/mSystems.00250-21

Menheere, D., Van Hartingsveldt, E., Birkebæk, M., Vos, S. & Lallemand, C. (2021). Laina: Dynamic Data Physicalization for Slow Exercising Feedback. In DIS 2021 - Proceedings of the 2021 ACM Designing Interactive Systems Conference: Nowhere and Everywhere (pp. 1015-1030). Association for Computing Machinery. https://doi.org/10.1145/3461778.3462041

Zeng, K., Charlesworth, B. & Hobolth, A. (2021). Studying models of balancing selection using phase-type theory. Genetics, 218(2), Article iyab055. https://doi.org/10.1093/genetics/iyab055

Pedersen, V. K., Knutsen, Å. R., Pallisgaard-Olesen, G., Andersen, J. L., Moucha, R. & Huismans, R. S. (2021). Widespread glacial erosion on the Scandinavian passive margin. Geology, 49(8), 1004-1008. https://doi.org/10.1130/G48836.1

Otzen, D. E., Pedersen, J. N., Somavarapu, A. K., Clement, A., Ji, M., Petersen, E. H., Pedersen, J. S., Urban, S. & Schafer, N. P. (2021). Cys-labelling kinetics of membrane protein GlpG: a role for specific SDS binding and micelle changes? Biophysical Journal, 120(18), 4115-4128. https://doi.org/10.1016/j.bpj.2021.08.001

Nielsen, K. H. & Nielsen, H. (2021). Camp Century: The Untold Story of America's Secret Arctic Military Base Under the Greenland Ice. Colombia University Press.

Andreasen, R. & Thomsen, E. (2021). Response: Commentary: Strontium Is Released Rapidly From Agricultural Lime-Implications for Provenance and Migration Studies. Frontiers in Ecology and Evolution, 9. https://doi.org/10.3389/fevo.2021.711310

Kjølbye, L. R., De Maria, L., Wassenaar, T. A., Abdizadeh, H., Marrink, S. J., Ferkinghoff-Borg, J. & Schiøtt, B. (2021). General Protocol for Constructing Molecular Models of Nanodiscs. Journal of Chemical Information and Modeling, 61(6), 2869-2883. https://doi.org/10.1021/acs.jcim.1c00157

Kragh, G. (2021). Citizen Science Nyt. Habitat, 23, 47-50. https://dzs.dk/wp-content/uploads/2021/07/HABITAT23_FINAL.pdf

Davidsen, M. B., Teixeira, J. F. L., Dehli, J., Karlsson, C., Kraft, D., Souza, P. P. C. & Foss, M. (2021). Post-treatments of polydopamine coatings influence cellular response. Colloids and Surfaces B: Biointerfaces, 207, Article 111972. https://doi.org/10.1016/j.colsurfb.2021.111972

Krause-Jensen, D., Archambault, P., Assis, J., Bartsch, I., Bischof, K., Filbee-Dexter, K., Dunton, K. H., Maximova, O., Ragnarsdóttir, S. B., Sejr, M. K., Simakova, U., Spiridonov, V., Wegeberg, S., Winding, M. H. S. & Duarte, C. M. (2021). Corrigendum: Imprint of Climate Change on Pan-Arctic Marine Vegetation (Front. Mar. Sci, (2020), 7, (617324), 10.3389/fmars.2020.617324). Frontiers in Marine Science, 8, Article 701634. https://doi.org/10.3389/fmars.2021.701634

Perić, Z. M., Marković, S. B., Filyó, D., Thiel, C., Murray, A. S., Gavrilov, M. B., Nett, J. J. & Sipos, G. (2021). Quartz OSL and polymineral post IR–IRSL dating of the Požarevac loess–palaeosol sequence in north–eastern Serbia. Quaternary Geochronology, 66, Article 101216. https://doi.org/10.1016/j.quageo.2021.101216

Birk, S. E., Mosgaard, M. D., Kjeldsen, R. B., Boisen, A., Meyer, R. L. & Nielsen, L. H. (2021). Management of oral biofilms by nisin delivery in adhesive microdevices. European Journal of Pharmaceutics and Biopharmaceutics, 167, 83-88. https://doi.org/10.1016/j.ejpb.2021.07.007

Nielsen, N. H., Henriksen, P. S., Mortensen, M. F., Enevold, R., Mortensen, M. N., Scavenius, C. & Enghild, J. J. (2021). The last meal of Tollund Man: New analyses of his gut content. Antiquity, 95(383), 1195-1212. https://doi.org/10.15184/aqy.2021.98

Brogaard, K., Grundahl, F., Sandquist, E. L., Slumstrup, D., Thomsen, J. B., Jørgensen, J. H., Larsen, J. R., Bjørn, S. T., Sørensen, C. T. G., Bruntt, H., Arentoft, T., Frandsen, S., Jessen-Hansen, J., Orosz, J. A., Mathieu, R., Geller, A., Ryde, N., Stello, D., Meibom, S. ... Jensen, M. L. (2021). Age and helium content of the open cluster NGC 6791 from multiple eclipsing binary members: III. Constraints from a subgiant. Astronomy and Astrophysics, 649, Article A178. https://doi.org/10.1051/0004-6361/202140911

Miglio, A., Girardi, L., Grundahl, F., Mosser, B., Bastian, N., Bragaglia, A., Brogaard, K., Buldgen, G., Chantereau, W., Chaplin, W., Chiappini, C., Dupret, M. A., Eggenberger, P., Gieles, M., Izzard, R., Kawata, D., Karoff, C., Lagarde, N., Mackereth, T. ... Vincenzo, F. (2021). HAYDN: High-precision AsteroseismologY of DeNse stellar fields. Experimental Astronomy, 51(3), 963-1001. https://doi.org/10.1007/s10686-021-09711-1

Kulkarni, R., Mathur, U. & Pavlogiannis, A. (2021). Dynamic Data-Race Detection Through the Fine-Grained Lens. In S. Haddad & D. Varacca (Eds.), 32nd International Conference on Concurrency Theory (CONCUR 2021) (pp. 16:1-16:23). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.CONCUR.2021.16

Agarwal, P., Chatterjee, K., Pathak, S., Pavlogiannis, A. & Toman, V. (2021). Stateless Model Checking Under a Reads-Value-From Equivalence. In A. Silva, K. Rustan & M. Leino (Eds.), Computer Aided Verification - 33rd International Conference, CAV 2021, Proceedings: Proceedings (Vol. 1, pp. 341-366). Springer. https://doi.org/10.1007/978-3-030-81685-8_16

Talotta, R., Bahrami, S. & Laska, M. J. (2021). POS0349 SEQUENCE COMPLEMENTARITY BETWEEN SARS-CoV-2 GENOME AND HUMAN NONCODING RNAS ASSOCIATED WITH IMMUNOLOGICAL DISORDERS: AN IN SILICO PIVOTAL STUDY. Annals of the Rheumatic Diseases, 80, 404-405.

Frank, M. S., Lee, T.-H., Bhattacharyya, G., Tsang, P. K. H., Quito, V. L., Dobrosavljevic, V., Christiansen, O. & Lanata, N. (2021). Quantum embedding description of the Anderson lattice model with the ghost Gutzwiller approximation. Physical Review B - Condensed Matter and Materials Physics, 104(8), Article L081103 . https://doi.org/10.1103/PhysRevB.104.L081103