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Department of Biology

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The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Pedersen, F. S., Duch, M. R. & Jespersen, T. (2003). New retroviral vector expressing a gene under the translational control of an internal ribosomal entry site, useful for making a medicament for use in gene therapy and for efficient translation of the gene. (Patent No. US2003157718-A1).

Pedersen, F. S., Mikkelsen, J. G., Rasmussen, S. V., Duch, M. R. & Aagaard, L. (2002). New retroviral vector system comprising a retroviral vector having modified heterologous or synthetic dimerization sequence and a transcript of different retrovirus useful for preparing a composition or medicament for gene therapy. (Patent No. WO200292825-A2).

Nielsen, S. B., Stephenson, R. & Thomsen, E. (2008). The North Atlantic and African plate boundaries of Europe dynamically linked by Paleocene intra-plate deformations. Abstract from EGU General Assembly 2007, Vienna, Austria.

Nielsen, S. B. & working group, C. (2008). Protracted erosion and climate change creates an illusion of Cenozoic uplift for the Scandinavian Caledonides. Abstract from Protracted erosion and climate change creates an illusion of Cenozoic uplift for the Scandinavian Caledonides.

Nguyen, N. H. T., Nielsen, M. B., Tordrup, D. P., Andersen, A. H., Knudsen, B. R. & Andersen, F. F. (2007). Human Topoisomerase I as an SR-protein Specific Kinase. Abstract from Human Topoisomerase I as an SR-protein Specific Kinase.

Nielsen, S. B. (2007). Norges fjelde og den naturvidenskabelige process. Geologisk Nyt, (3), 22-24.

Mandau, B. H., Jensen, S. J., Hougaard, R. F., Veigaard, C., Kjeldsen, E., Andersen, F. F., Andersen, A. H. & Knudsen, B. R. (2007). Role for the N-terminal domain of Human Topoisomerase I in vivo. Abstract from Role for the N-terminal domain of Human Topoisomerase I in vivo.

Jensen, S. J., Oliveira, C., Tordrup, D. P., Pedersen, J. S., Andersen, F. F. & Knudsen, B. R. (2008). Structure of Human Topoisomerase I in solution. Poster session presented at 6th annual iNANO meeting.

Damgård, I. B. & Nielsen, J. B. (2007). Scalable and Unconditionally Secure Multiparty Computation. In A. Menezes (Ed.), Advances in Cryptology - CRYPTO 2007: 27th Annual International Cryptology Conference, Santa Barbara, CA, USA, August 19-23, 2007. Proceedings (pp. 572-590). Springer. https://doi.org/10.1007/978-3-540-74143-5_32

Tordrup, D. P., Oliveira, C., Jensen, S. J., Desideri, A., Falconi, M., Oteri, F., Ludtke, S., Serysheva, I., Knudsen, B., Pedersen, J. S., Knudsen, B. R. & Andersen, F. F. (2008). Assembly and Structural Analysis of a Covalently Closed Nanoscale DNA Cage. Poster session presented at 6th annual iNANO meeting.

Hougaard, R. F., Veigaard, C., Andersen, F. F., McClendon, A. K., Gentry, A., Jensen, S. J., Mandau, B. H., Kjeldsen, E., Andersen, A. H., Osheroff, N. & Knudsen, B. R. (2007). Functions of the N-terminal Domain in Human Topoisomerase I. Abstract from Functions of the N-terminal Domain in Human Topoisomerase I.

Castelli, S., Vassallo, O., Fiorani, P., Veigaard, C., Knudsen, B. R. & Desideri, A. (2008). Preliminary Spectroscopic Characterization of Human Topoisomerase IB N-terminal Domain. Abstract from Preliminary Spectroscopic Characterization of Human Topoisomerase IB N-terminal Domain.

Pedersen, F. S., Besenbacher, F., Duch, M. R. & Foss, M. (2008). Microenvironment testing biosurface structure for cultivation of cells, has set of tester areas each including surface topology whose features are defined on micro- or nanometer scale, and bioactive compound deposited in surface. (Patent No. WO2006114097-A2; EP1875234-A2).

Pedersen, F. S., Besenbacher, F., Duch, M. R., Foss, M., Justesen, J., Andersen, L. K., Crovato, T. E. L. & Markert, L. DA. (2008). Biocompatible material for use in e.g. cell culture, has nano or micrometer scale topographical structure comprising several features of predetermined dimension, arranged in regular pattern. (Patent No. WO2006114098-A2; EP1874367-A2).

Faupin, J. (2008). Resonances of the confined hydrogen atom and the Lamb-Dicke effect in non-relativistic qed. Annales Henri Poincare, 9(4), 743-773. https://doi.org/10.1007/s00023-008-0371-y

Hasemann, M. S., Damgaard, I., Schuster, M. B., Theilgaard-Monch, K., Sørensen, A. B., Mrsic, A., Krugers, T., Ylstra, B., Pedersen, F. S., Nerlov, C. & Porse, B. T. (2008). Mutation of C/EBP{alpha} predisposes to the development of myeloid leukemia in a retroviral insertional mutagenesis screen. Blood, 111(8), 4309 - 4321. https://doi.org/10.1182/blood-2007-06-097790

Pedersen, F. S. (2008). Niels Ole Kjeldgaard, 2. juni 1926 - 31. maj 2006. In Det Kongelige Danske Videnskabernes Selskab, Oversigt over Selskabets Virksomhed 2006-2007 (pp. 229-34). Det Kongelige Danske Videnskabernes Selskab.

Pedersen, F. S. & Sørensen, A. B. (2010). Pathogenesis of oncoviral infections. In R. Kurth & N. Bannert (Eds.), Retroviruses: Molecular Microbiology and Genomics (pp. 237 - 268). Horizon Press.

Martensen, P. M. & Justesen, J. (2008). Different properties of two small forms of human 2-5A synthetase. Poster session presented at 1957-2007: 50th anniversary of interferon "From interferon discovery to clinical application", Paris, France.

Vestergaard, A. L., Mathiesen, M. J., Andersen, M. Ø., Ward, S., Bramsen, J. B., Lykke-Andersen, S. & Martensen, P. M. (2007). Cell signalling and apoptosis: Molecular cell biology. Laboratory course manual.

Zhang, W., Kunz, T. & Hansen, K. M. (2007). Product Line Enabled Intelligent Mobile Middleware. In IEEE International Conference on Engineering of Complex Computer Systems (pp. 148-160). IEEE Computer Society Press. https://doi.org/10.1109/ICECCS.2007.38

Zhang, W., Han, D. & Kunz, T. (2007). Object-Orientation is Evil for Mobile Games: Experience from Industrial Mobile RPGs. In Embedded Software and Systems, Third International Conference, ICESS 2007 (pp. 1-12). Springer. https://doi.org/10.1007/978-3-540-72685-2_1

Zhang, W. & Kunz, T. (2007). Enhancing the Intelligence of Mobile Middleware Environment. In 2007 International Workshop on Context Management for Self-Managing Systems (Devices, Applications, and Networks) (CASEMANS 2007) (pp. 46-61)

Zhang, W. (2007). An Overview of Product Line Enabled Intelligent Mobile Middleware. In 31st Annual International Computer Software and Applications Conference IEEE Computer Society Press.

Zhang, W. (2008). Synergy between Software Product Line and Intelligent Pervasive Middleware-a PLIPerM Approach. International Journal of Hybrid Information Technology, 1(1), 17-30. http://www.sersc.org/journals/IJHIT/vol1_no1_2008.php

Eriksson, E., Hansen, T. R. & Lykke-Olesen, A. (2007). Reclaiming public space: designing for public interaction with private devices. In Proceedings of the 1st International Conference on Tangible and Embedded Interaction (pp. 31-38). Society for Industrial and Applied Mathematics. https://doi.org/10.1145/1226969.1226976

Hansen, T. R. & Bardram, J. (2007). Applying Mobile and Pervasive Computer Technology to Enhance Coordination of Work in a Surgical Ward. In Studies in Health Technology and Informatics: MEDINFO 2007 - Proceedings of the 12th World Congress on Health (Medical) Informatics - Building Sustainable Health Systems (Vol. 129, pp. 107-111). IOS Press. http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&uid=17911688&cmd=showdetailview&indexed=google

Hansen, T. R. & Bardram, J. E. (2007). Applying mobile and pervasive computer technology to enhance coordination of work in a surgical ward. Medinfo. MEDINFO: 267, 12(Pt 1), 107-111.

Nielsen, M., Aranda, J. A., Di Giusto, C. & Valencia, F. (2007). CCS with Replication in the Chomsky Hierarchy: The Expressive Power of Divergence. In Z. Shao (Ed.), Programming Languages and Systems: 5th Asian Symposium, APLAS 2007, Singapore, November 29-December 1, 2007. Proceedings (pp. 383-398). Springer. https://doi.org/10.1007/978-3-540-76637-7_26

Hansen, T. R. (2007). SpaceExplorer: A Ubiquitous Web Browser Extension for Spatial Web pages on Multiple Devices. In A. C. Brodersen, S. Bødker & C. N. Klokmose (Eds.), Multiple and Ubiquitous Interaction, 28. - 30. March 2007: Book of abstracts (pp. 43-46)

Hansen, T. R. (2007). Demonstration: SpaceExplorer - A Tool for Designing Ubiquitous Web Applications for Collections of Displays. In UbiComp 2007, 9th International Conference, Adjunct Proceedings (Vol. LNCS 4717, pp. 159-162). Springer.

Haldrup, C., B. Nielsen, L., Lykke, J. & Pedersen, L. (2007). Role of type III NaPi transporter(s) in osteoblastic differentiation. Journal of Bone and Mineral Research (JBMR), 22, S371.

Stawiaski, J., Sørensen, T. S., Bidault, F. & Decenciere, E. (2007). Combining Morphological and Graph Based Methods for Multi-Label Segmentation. In Proceedings of MICCAI workshop: Interaction in Medical Image Analysis and Visualization

Damgård, I. B. (2007). A "proof-reading" of Some Issues in Cryptography. In Automata, Languages and Programming: 34th International Colloquium, ICALP 2007, Wroclaw, Poland, July 9-13, 2007. Proceedings (pp. 2-11). Springer. https://doi.org/10.1007/978-3-540-73420-8_2

Damgård, I. B. & Thorbek, R. (2007). Non-interactive Proofs for Integer Multiplication. In M. Naor (Ed.), Advances in Cryptology - EUROCRYPT 2007: 26th Annual International Conference on the Theory and Applications of Cryptographic Techniques, Barcelona, Spain, May 20-24, 2007. Proceedings (pp. 412-429). Springer. https://doi.org/10.1007/978-3-540-72540-4_24

Damgård, I. B., Cramer, R. & de Haan, R. (2007). Atomic Secure Multi-party Multiplication with Low Communication. In M. Naor (Ed.), Advances in Cryptology - EUROCRYPT 2007: 26th Annual International Conference on the Theory and Applications of Cryptographic Techniques, Barcelona, Spain, May 20-24, 2007. Proceedings (pp. 329-346). Springer. https://doi.org/10.1007/978-3-540-72540-4_19

Brodal, G. S., Fagerberg, R. & Moruz, G. (2008). On the Adaptiveness of Quicksort. Journal of Experimental Algorithmics, 12. https://doi.org/10.1145/1227161.1402294

Heckmann, A. B. L., Lombardo, F., Miwa, H., Perry, J. A., Bunnewell, S., Parniske, M., Wang, T. L. & Downie, J. A. (2006). Lotus japonicus nodulation requires two GRAS domain regulators, one of which is functionally conserved in a non-legume. Plant Physiology, 142(4), 1739-1750.

Damgård, I. B., Salvail, L., Fehr, S., Schaffner, C. & Renner, R. (2007). A Tight High-Order Entropic Quantum Uncertainty Relation with Applications. In A. Menezes (Ed.), Advances in Cryptology - CRYPTO 2007: 27th Annual International Cryptology Conference, Santa Barbara, CA, USA, August 19-23, 2007. Proceedings (pp. 360-378). Springer. https://doi.org/10.1007/978-3-540-74143-5_20

Damgård, I. B., Salvail, L., Schaffner, C. & Fehr, S. (2007). Secure Identification and QKD in the Bounded-Quantum-Storage Model. In A. Menezes (Ed.), Advances in Cryptology - CRYPTO 2007: 27th Annual International Cryptology Conference, Santa Barbara, CA, USA, August 19-23, 2007. Proceedings (pp. 342-359). Springer. https://doi.org/10.1007/978-3-540-74143-5_19

Damgård, I. B., Nielsen, J. B., Fitzi, M. & Desmedt, Y. (2007). Secure Protocols with Asymmetric Trust. In Advances in Cryptology - ASIACRYPT 2007: 13th International Conference on the Theory and Application of Cryptology and Information Security, Kuching, Malaysia, December 2-6, 2007. Proceedings (pp. 357-375). Springer. https://doi.org/10.1007/978-3-540-76900-2_22

Damgård, I. B., Krøigaard, M. & Geisler, M. J. (2007). Efficient and Secure Comparison for On-Line Auctions. In J. Pieprzyk, H. Ghodosi & E. Dawson (Eds.), Information Security and Privacy: 12th Australasian Conference, ACISP 2007, Townsville, Australia, July 2-4, 2007. Proceedings (Vol. 4586, pp. 416-430). Springer. https://doi.org/10.1007/978-3-540-73458-1_30

Lombardo, F., Heckmann, A. B. L., Miwa, H., Perry, J. A., Yano, K., Hayashi, M., Parniske, M., Wang, T. L. & Downie, J. A. (2006). Identification of symbiotically defective mutants of Lotus japonicus affected in infection thread growth. Molecular plant-microbe interactions, 19(12), 1444-1450.

Heckmann, A. B. L., Lombardo, F., Miwa, H., Perry, J. A., Karas, B., Szczyglowski, K., Parniske, M., Wang, T. L. & Downie, J. A. (2008). Lotus japonicus nodulation requires two GRAS-domain regulators, NSP1 and NSP2. Poster session presented at Plant Biotech Denmark, Annual Meeting 2008, København, Denmark.

Schwartzbach, M. I. (2008). Design Choices in a Compiler Course or How to Make Undergraduates Love Formal Notation. In L. Hendren (Ed.), Compiler Construction: 17th International Conference, CC 2008, Held as Part of the Joint European Conferences on Theory and Practice of Software, ETAPS 2008, Budapest, Hungary, March 29 - April 6, 2008. Proceedings (pp. 1-15). Springer. https://doi.org/10.1007/978-3-540-78791-4_1

Christensen, B. G., Kristensen, M. D., Hansen, F. A. & Bouvin, N. O. (2008). Enabling Co-located Learning over Mobile Ad Hoc P2P with LightPeers. Journal of Networks, 3(2), 64-71. https://doi.org/10.4304/jnw.3.2.64-71

Kristensen, M. D. & Bouvin, N. O. (2008). Energy Efficient MANET Routing Using a Combination of Span and BECA/AFECA. Journal of Networks, 3(3), 49-56. https://doi.org/10.4304/jnw.3.3.49-56

Abou Salem, W. K., Faupin, J., Froehlich, J. & Sigal, I. M. (2008). On the Theory of Resonances in Non-Relativistic QED and Related Models. arxiv.org. http://arxiv.org/abs/0711.4708

Ungar, D. & Ernst, E. (2007). Point/Counterpoint. I E E E Software, 24(5), 72-75. https://doi.org/10.1109/MS.2007.142

Ernst, E. (Ed.) (2007). ECOOP 2007 - Object-Oriented Programming: 21st European Conference, Berlin, Germany, July 30 - August 3, 2007. Proceedings. Springer. Lecture Notes in Computer Science Vol. 4609

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Anne Kirstine Mehlsen