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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Allen, D. E., Dalal, R. C., Rennenberg, H., Meyer, R. L., Reeves, S. & Schmidt, S. (2007). Spatial and temporal variation of nitrous oxide and methane flux between subtropical mangrove sediments and the atmosphere. Soil Biology & Biochemistry, 39, 622-631.
Allen, E. H. A., Courtney, D. G., Atkinson, S. D., Moore, J. E., Mairs, L., Toftgaard Poulsen, E., Schiroli, D., Maurizi, E., Cole, C., Hickerson, R. P., James, J., Murgatroyd, H., Smith, F. J. D., MacEwen, C., Enghild, J. J., Nesbit, M. A., Leslie Pedrioli, D. M., McLean, W. H. I. & Moore, C. B. T. (2015). Keratin 12 missense mutation induces the unfolded protein response and apoptosis in Meesmann epithelial corneal dystrophy. Human Molecular Genetics, 25(6), 1176-1191. https://doi.org/10.1093/hmg/ddw001
Allen, P., Bain, D. R., Bridgland, D. R., Buisson, P., Buylaert, J. P., Bynoe, R., George, W. H., Haggart, B. A., Horne, D. J., Littlewood, E. M., Lord, A. R., March, A. C., Mercer, I., Mercer, R., Murray, A. S., Penkman, K. E. H., Preece, R. C., Ratford, J., Schreve, D. C. ... White, T. S. (2022). Mid-Late Quaternary Fluvial Archives near the Margin of the MIS 12 Glaciation in Southern East Anglia, UK: Amalgamation of Multi-Disciplinary and Citizen-Science Data Sources. Quaternary, 5(3), Article 37. https://doi.org/10.3390/quat5030037
Allen, K., Brändle, F., Botvinick, M., Fan, J. E., Gershman, S. J., Gopnik, A., Griffiths, T. L., Hartshorne, J. K., Hauser, T. U., Ho, M. K., de Leeuw, J. R., Ma, W. J., Murayama, K., Nelson, J. D., van Opheusden, B., Pouncy, T., Rafner, J., Rahwan, I., Rutledge, R. B. ... Schulz, E. (2024). Using games to understand the mind. Nature Human Behaviour, 8(6), 1035-1043. https://doi.org/10.1038/s41562-024-01878-9
Allen, B. L., Abraham, A. J., Arlinghaus, R., Belant, J. L., Blumstein, D. T., Bobier, C., Bodenchuk, M. J., Clauss, M., Dawson, S. J., Derbyshire, S. W. G., Ferreira, S. M., Fleming, P. J. S., Forssman, T., Gorecki, V., Gortázar, C., Griffin, A. S., Hampton, J. O., Haswell, P. M., Kerley, G. I. H. ... von Essen, E. (2025). Ethical arguments that support intentional animal killing. Frontiers in Ecology and Evolution, 13, Article 1684894. https://doi.org/10.3389/fevo.2025.1684894
Allender, E., Bürgisser, P., Kjeldgaard-Pedersen, J. & Miltersen, P. B. (2005). On the Complexity of Numerical Analysis. Electronic Colloquium on Computational Complexity, (TR05-037), 1-12.
Allendorf, F. W., Christiansen, F., Dobson, T. & Eanes, W. F. (1979). Electrophoretic variation in large mammals I. The polar bear, Thalarctos maritimus. Hereditas, 91, 19-22.
Allieta, M., Scavini, M., Lo Presti, L., Coduri, M., Loconte, L., Cappelli, S., Oliva, C., Ghigna, P., Pattison, P. & Scagnoli, V. (2013). Charge ordering transition in GdBaCoO: Evidence of reentrant behavior. Physical Review B - Condensed Matter and Materials Physics, 88(21). https://doi.org/10.1103/PhysRevB.88.214104
Allman, S. A., Jensen, H. H., Vijayakrishnan, B., Garnet, J. A., Leon, E., Liu, Y., Anthony, D. C., Sibson, N. R., Feizi, T., Matthews, S. & Davis, B. G. (2009). Potent Fluoro-oligosaccharide Probes of Adhesion in Toxoplasmosis. ChemBioChem, 10, 2522-2529.
Allred, J. M., Jia, S., Bremholm, M., Chan, B. C. & Cava, R. J. (2012). Ordered CoSn-type ternary phases in Co3Sn3-xGex. Journal of Alloys and Compounds, 539, 137-143. https://doi.org/10.1016/j.jallcom.2012.04.045
Allum, F., Burt, M., Amini, K., Boll, R., Köckert, H., Olshin, P. K., Bari, S., Bomme, C., Brauße, F., Cunha de Miranda, B., Düsterer, S., Erk, B., Géléoc, M., Geneaux, R., Gentleman, A. S., Goldsztejn, G., Guillemin, R., Holland, D. M. P., Ismail, I. ... Rolles, D. (2018). Coulomb explosion imaging of CH3I and CH2CII photodissociation dynamics. Journal of Chemical Physics, 149(20), 204313, 1-10. Article 204313. https://doi.org/10.1063/1.5041381
Almansa Guerra, J. F., Damgård, I. B. & Nielsen, J. B. (2006). Simplified Threshold RSA with Adaptive and Proactive Security. In S. Vaudenay (Ed.), Advances in Cryptology - Eurocrypt 2006: 24th Annual International Conference on the Theory and Applications of Cryptographic Techniques, St. Petersburg, Russia, May 28 - June 1, 2006. Proceedings (pp. 593-611). Springer. https://doi.org/10.1007/11761679_35
Almeida, A. M., Bassols, A., Bendixen, E., Bhide, M., Ceciliani, F., Cristobal, S., Eckersall, P. D., Hollung, K., Lisacek, F., Mazzucchelli, G., McLaughlin, M., Miller, I., Nally, J. E., Plowman, J., Renaut, J., Rodrigues, P., Roncada, P., Staric, J. & Turk, R. (2015). Animal board invited review: advances in proteomics for animal and food sciences. Animal, 9(1), 1-17. https://doi.org/10.1017/S1751731114002602
Almeida, C. M. R., Carvalho, P. N., Fernandes, J. P., Basto, M. C. P. & Mucha, A. P. (2016). Constructed wetlands for livestock wastewater treatment: Antibiotics removal and effects on CWs performance. In Phytoremediation: Management of Environmental Contaminants (Vol. 4, pp. 267-281). Springer Publishing Company. https://doi.org/10.1007/978-3-319-41811-7_14
Almeida, A. V., Jacinto, J. P., Guerra, J. P. L., Vieira, B. J. C., Waerenborgh, J. C., Jones, N. C., Hoffmann, S. V., Pereira, A. S. & Tavares, P. (2021). Structural features and stability of apo- and holo-forms of a simple iron–sulfur protein. European Biophysics Journal, 50(3-4), 561-570. https://doi.org/10.1007/s00249-021-01546-0
Almeida, A. V., Carvalho, A. J., Calmeiro, T., Jones, N. C., Hoffmann, S. V., Fortunato, E., Pereira, A. S. & Tavares, P. (2022). Condensation and protection of DNA by the Myxococcus xan-thus encapsulin: a novel function. International Journal of Molecular Sciences , 23(14), Article 7829. https://doi.org/10.3390/ijms23147829
Almenara, J. M., Astudillo-Defru, N., Bonfils, X., Forveille, T., Santerne, A., Albrecht, S., Barros, S. C. C., Bouchy, F., Delfosse, X., Demangeon, O., Diaz, R. F., Hébrard, G., Mayor, M., Neves, V., Rojo, P., Santos, N. C. & Wünsche, A. (2015). A HARPS view on K2-3. Astronomy & Astrophysics (A&A), 581, Article L7. https://doi.org/10.1051/0004-6361/201525918
Almubaidin, M. A., Ismail, N. S. B., Latif, S. D., Ahmed, A. N., Dullah, H., El-Shafie, A. & Sonne, C. (2024). Machine learning predictions for carbon monoxide levels in urban environments. Results in Engineering, 22, Article 102114. https://doi.org/10.1016/j.rineng.2024.102114
Al-Najjar, M., Jørgensen, B. B., de Beer, D., Kühl, M. & Polerecky, L. (2010). Conversion and conservation of light energy in a photosynthetic microbial mat ecology. I S M E Journal, (4), 440-449. https://doi.org/10.1038/ismej.2009.121
Alnøe, A. B. (2015). Ecosystem functions in macrophyte dominated streams. Aarhus University, Science and Technology.
Alnor, T., Kristiansen, S. M., Graeber, D. & Kronvang, B. (2017). Dyrkning sender fortidens kulstof fra jord til fjord. Vand & Jord, 24(4), 132-136.
Alon, N., Dietzfelbinger, M., Miltersen, P. B., Petrank, E. & Tardos, G. (1999). Linear hash functions. Journal of the ACM, 46(5), 667-683. https://doi.org/10.1145/324133.324179
Alon, N., Dietzfelbinger, M., Miltersen, P. B., Petrank, E. & Tardos, G. (1997). Is linear hashing good? In Proceedings of the twenty-ninth annual ACM symposium on Theory of computing (pp. 465-474). Association for Computing Machinery. https://doi.org/10.1145/258533.258639
Alon, H., Garrick, R., Pujari, S. P., Toledano, T., Sinai, O., Kedem, N., Bendikov, T., Baio, J. E., Weidner, T., Zuilhof, H., Cahen, D., Kronik, L., Sukenik, C. N. & Vilan, A. (2018). Effect of Internal Heteroatoms on Level Alignment at Metal/Molecular Monolayer/Si Interfaces. Journal of Physical Chemistry C, 122(6), 3312-3325. https://doi.org/10.1021/acs.jpcc.7b09118
Alon, N., Grønlund, A., Jørgensen, S. F. & Larsen, K. G. (2024). Sublinear Time Shortest Path in Expander Graphs. In R. Kralovic & A. Kucera (Eds.), 49th International Symposium on Mathematical Foundations of Computer Science, MFCS 2024 (pp. 8:1-8:13). Article 8 Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.MFCS.2024.8
Alon, N., Bousquet, O., Larsen, K. G., Moran, S. & Moran, S. (2024). Diagonalization Games. The American Mathematical Monthly, 131(10), 866-879. https://doi.org/10.1080/00029890.2024.2393992
Alonso, R. E., Svane, A., Rodríguez, C. O. & Christensen, N. E. (2004). Nuclear quadrupole moment determination of 35CL, 79Br, and 127I. Physical Review B, 69, 125101-125101.
Alonso, C., Eliash, R., Jensen, T. R., Kjaer, K., Lahav, M. & Leiserowitz, L. (2001). Guest Intercalation at Corrugated Surface of Host Monolayer Crystal on Water: Cholesteryl-L-Glutamate and Water-Soluble Amino Acids. Journal of the American Chemical Society, 123, 10105-10106.

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Van Meerbeek, K., Hermy, M. & Muys, B. (2018). Nature conservation and bioenergy production-a response to Kallimanis. Frontiers in Ecology and the Environment, 16(2), 75-76. https://doi.org/10.1002/fee.1768
Van Limbergen, T., Roegiers, I. H., Bonné, R., Mare, F., Haeldermans, T., Joos, B., Nouwen, O., Manca, J. V., Vangronsveld, J. & Thijs, S. (2022). Characterisation of Two Wood-Waste and Coffee Bean Husk Biochars for the Removal of Micropollutants from Water. Frontiers in Environmental Science, 10, Article 814267. https://doi.org/10.3389/fenvs.2022.814267
Van Limbergen, T., Bonné, R., Hustings, J., Valcke, R., Thijs, S., Vangronsveld, J. & Manca, J. V. (2022). Plant microbial fuel cells from the perspective of photovoltaics: Efficiency, power, and applications. Renewable and Sustainable Energy Reviews, 169, Article 112953. https://doi.org/10.1016/j.rser.2022.112953
van Heerwaarden, B., Lee, R. F. H., Overgaard, J. & Sgró, C. (2014). No patterns in thermal plasticity along a latitudial gradient in Drosophila simulans from eastern Australia. Journal of Evolutionary Biology, 27(11), 2541-2553. https://doi.org/10.1111/jeb.12510
Vangheel, M., Henau, S. D., Tilleman, L., Germani, F., Helbo, S., Desmet, F., Van Doorslaer, S., Hoogewijs, D., Schoofs, L., Fago, A., Moens, L., Dewilde, S. & Braeckman, B. B. (2014). GLB-33: when a globin hooks up with a G-protein coupled receptor. Poster session presented at XVIII Conference on Oxygen-Binding and Sensing Proteins, Sheffield, United Kingdom.
Vang, T., Lund-Hansen, L. C. & Morten, N. H. (2005). Lille Bælt. Vandmiljøovervågning maj 2005. Fyn, Sønderjylland og Vejle Amt: Klorofylmaksimum og hydraulisk kontrol i Lille Bælt. In Lille Bælt. Vandmiljøovervågning maj 2005. Fyn, Sønderjylland og Vejle Amt (pp. 44-69)
Vang, T. & Hansen, J. W. (2013). Ilt i vandsøjlen. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk anvisning fra Det Marine Fagdatacenter, DCE No. M04, ver.1 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Vang, T. (2013). CTD måling. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk anvisning fra Det Marine Fagdatacenter, DCE No. M03 ver. 1 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Vang, T. (2014). CTD måling. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk anvisning fra Det Marine Fagdatacenter, DCE No. M03, ver.2 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Vang, T. & Hansen, J. W. (2014). Ilt i vandsøjlen. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk anvisning fra Det Marine Fagdatacenter, DCE No. M04 ver.2 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Vandvik, V., Halbritter, A. H., Macias-Fauria, M., Maitner, B. S., Michaletz, S. T., Telford, R. J., Bison, N., Chacon-Labella, J., Cotner, S., Egelkraut, D., Garen, J., Gaudard, J., Geange, S. R., Rosati, M. A., Andersen, E. A. S., Ahler, S. J., Atkinson, J., Baumane, M., Bradler, P. M. ... Enquist, B. J. (2025). Plant traits and associated ecological data from global change experiments and climate gradients in Norway. Scientific Data, 12(1), Article 1477. https://doi.org/10.1038/s41597-025-05509-4
Vandsø, A., Leth-Espensen, P., Barfod, A. S., Oelsner, G. & Shepherd, N. (2025). Verden i vindueskarmen. In Plantefeber: Verden i vindueskarmen (pp. 14-25). Aarhus Universitetsforlag.
Vandieken, V., Mussmann, M., Niemann, H. H. & Jørgensen, BB. (2006). Desulfuromonas svalbardensis sp nov and Desulfuromusa ferrireducens sp nov., psychrophilic, Fe(III)-reducing bacteria isolated from Arctic sediments, Svalbard. International Journal of Systematic and Evolutionary Microbiology, 56, 1133-1139.
van de Velde, S. J., Hylén, A., Kononets, M., Marzocchi, U., Leermakers, M., Choumiline, K., Hall, P. O. J. & Meysman, F. J. R. (2020). Elevated sedimentary removal of Fe, Mn, and trace elements following a transient oxygenation event in the Eastern Gotland Basin, central Baltic Sea. Geochimica et Cosmochimica Acta, 271, 16-32. https://doi.org/10.1016/j.gca.2019.11.034
Van Der Putten, T. A. W., Verhees, J. J. F., Koma, Z., Van Hoof, P. H., Heijkers, D., De Boer, W. F., Esser, H. J., Hoogerwerf, G. & Lemmers, P. (2025). Insights into the fine-scale habitat use of Eurasian Water Shrew (Neomys fodiens) using radio tracking and LiDAR. Journal of Mammalogy, 106(3), 549-560. https://doi.org/10.1093/jmammal/gyae146
van der Plas, F., Janzen, T., Ordonez, A., Fokkema, W., Reinders, J., Etienne, R. S. & Olff, H. (2015). A new modeling approach estimates the relative importance of different community assembly processes. Ecology, 96(6), 1502-1515. https://doi.org/10.1890/14-0454.1
van der Hoop, J. M., Byron, M. L., Ozolina, K., Miller, D. L., Johansen, J. L., Domenici, P. & Steffensen, J. F. (2018). Turbulent flow reduces oxygen consumption in the labriform swimming shiner perch, Cymatogaster aggregata. Journal of Experimental Biology, 221(11), Article 168773. https://doi.org/10.1242/jeb.168773
van der Hoop, J. M., Fahlman, A., Shorter, K. A., Gabaldon, J., Rocho-Levine, J., Petrov, V. & Moore, M. J. (2018). Swimming energy economy in bottlenose dolphins under variable drag loading. Frontiers in Marine Science, 5, Article 465. https://doi.org/10.3389/fmars.2018.00465
van der Hoop, J. M., E. Nousek‐McGregor, A., P. Nowacek, D., Parks, S. E., Tyack, P. L. & Madsen, P. P. T. (2019). Foraging rates of ram-filtering North Atlantic right whales. Functional Ecology, 33(7), 1290-1306. https://doi.org/10.1111/1365-2435.13357
van den Thillart, G., Wilms, I., Nieveen, M., Weber, R. E. & Witte, F. (2018). Hypoxia-induced changes in hemoglobins of Lake Victoria cichlids. Journal of Experimental Biology, 221(17), Article 177832. https://doi.org/10.1242/jeb.177832
VanCompernolle, M., Morris, J., Calich, H. J., Rodríguez, J. P., Marley, S. A., Pearce, J. R., Abrahms, B., Abrantes, K., Afonso, A. S., Aguilar, A., Agyekumhene, A., Akamatsu, T., Åkesson, S., Alawa, N. G., Alfaro-Shigueto, J., Anderson, R. C., Anker-Nilssen, T., Arata, J. A., Araujo, G. ... Sequeira, A. M. M. (2025). Vulnerability of marine megafauna to global at-sea anthropogenic threats. Conservation Biology. Advance online publication. https://doi.org/10.1111/cobi.70147
Van Colen, C., Montserrat, F., Middelburg, JJ., Herman, PM., Andersson, M., Rossi, F., Gribsholt, B., Vincx, M., Ysebaert, T. & Degraer, S. (2009). Restoration of estuarine tidal mudflat sediments after hypoxia. Abstract from ASLO Aquatic Sciences Meeting 2009, Nice, France.
Van Colen, C., Montserrat, F., Herman, PMJ., Middelburg, JJ., Ukendt, R., Gribsholt, B., Andersson, M., Vincx, M., Ysebaert, T. & Degraer, S. (2008). Benthic and biogeochemical recovery after an induced hypoxic event: the structuring role of macrofauna succession. Poster session presented at World Conference on Marine Biodiversity 2008, Valencia, Spain.
Vance, H. M., Hooker, S. K., Mikkelsen, L., van Neer, A., Teilmann, J., Siebert, U. & Johnson, M. P. (2021). Drivers and constraints on offshore foraging in harbour seals. Scientific Reports, 11(1), Article 6514. https://doi.org/10.1038/s41598-021-85376-2
Van Bruggen, E. F. J. & Weber, R. E. (1974). Erythrocruorin with anomalous quaternary structure from the polychaete Oenone fulgida. Biochimica et Biophysica Acta - Protein Structure , 359, 210-214.
Van Bodegom, P. M., Grootjans, A. P., Sorrell, B. K., Bekker, R. M., Bakker, C. & Ozinga, W. A. (2006). Plant traits in response to raising groundwater levels in wetland restoration: Evidence from three case studies. Applied Vegetation Science, 9(2), 251-260. https://doi.org/10.1658/1402-2001(2006)9[251:PTIRTR]2.0.CO;2
Van Bodegom, P. M., Sorrell, B. K., Oosthoek, A., Bakker, C. & Aerts, R. (2008). Separating the effects of partial submergence and soil oxygen demand on plant physiology. Ecology, 89(1), 193-204. https://doi.org/10.1890/07-0390.1