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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Møller, A. & Sridharan, M. (Eds.) (2021). 35th European Conference on Object-Oriented Programming, ECOOP 2021, July 11-17, 2021, Aarhus, Denmark (Virtual Conference). In A. Møller & M. Sridharan (Eds.), 35th European Conference on Object-Oriented Programming (ECOOP 2021) (pp. vii-ix). Dagstuhl Publishing. https://doi.org/10.4230/LIPIcs.ECOOP.2021.0
Alcantara, K. S., Ramallo-Lopez, J. M., Bösenberg, U., Saldan, I., Pistidda, C., Requejo, F. G., Jensen, T. R., Cerenius, Y., Sørby, M., Avila, J., Bellosta von Colbe, J., Taube, K., Klassen, T. & Dornheim, M. (2012). 3CaH2 + 4MgB2 + CaF2 Reactive Hydride Composite as a Potential Hydrogen Storage Material: Hydrogenation and Dehydrogenation Pathway. The Journal of Physical Chemistry Part C, 116(12), 7207-7212. https://doi.org/10.1021/jp211620h
Mosumgaard, J. R. (2016). 3D Atmospheres in 1D Models: Implementation. Abstract from SCORe16 -- Stellar Convection and Oscillations and their Relationship 2016, Aarhus, Denmark.
Mosumgaard, J. R. (2017). 3D Atmospheres in 1D Models: Implementation. Abstract from The Aarhus Red Giants Challenge, Aarhus, Denmark.
Klotzsche, A., Jan van der Kruk, Niklas Linde, Doetsch, J. & Harry Vereecken (2013). 3-D characterization of high-permeability zones in a gravel aquifer using 2-D crosshole GPR full-waveform inversion and waveguide detection. Geophysical Journal International, 195(2), 932-944. https://doi.org/10.1093/gji/ggt275
Kim, H., Høyer, A. S., Jakobsen, R., Thorling, L., Aamand, J., Maurya, P. K., Christiansen, A. V. & Hansen, B. (2019). 3D characterization of the subsurface redox architecture in complex geological settings. Science of the Total Environment, 693, Article 133583. https://doi.org/10.1016/j.scitotenv.2019.133583
Xue, H., Kelmann, P., Inati, S., Sørensen, T. S. & Hansen, M. (2014). 3D High Resolution l1-SPIRiT Reconstruction on Gadgetron based Cloud: no. 1882. Abstract from Joint Annual Meeting ISMRM-ESMRMB, Milan, Italy. http://www.ismrm.org/14/
Zuo, B., Hu, X., Wang, L., Cai, Y., Kass, M. A. & Leão-Santos, M. (2021). 3-D Magnetic Unstructured Inversion. Journal of Geophysical Research: Solid Earth, 126(11), Article e2021JB022668. https://doi.org/10.1029/2021JB022668
Xu, R. & Chen, M. (2016). 3D Mechanical Environment and Chemical Cues Influence HUMC Fibroblast Differentiation and Fibroblast-To-Myofbiroblast Transition. Poster session presented at Advances in Cell Engineering, Imaging and Screening: VIB tools and technologies, Leuven, Belgium.
Poulsen, S. E., Balling, N., Nielsen, S. B. & Bording, T. S. (2012). 3D modelling of geothermal reservoir temperatures in Denmark. Abstract from 74th EAGE Conference & Exhibition, Copenhagen, Denmark.
Meldgaard Madsen, L., Fiandaca, G., Cai, H., Engebretsen, K. W. & Auken, E. (2019). 3D modelling of time-domain induced polarization. Abstract from 5th International Workshop on Induced Polarization , Newark, United States.
Madsen, R. B., Kim, H., Kallesøe, A. J., Sandersen, P. B. E., Vilhelmsen, T. N., Hansen, T. M., Christiansen, A. V., Møller, I. & Hansen, B. (2021). 3D multiple-point geostatistical simulation of joint subsurface redox and geological architectures. Hydrology and Earth System Sciences, 25(5), 2759-2787. https://doi.org/10.5194/hess-25-2759-2021
Nordlander, T., Amarsi, A. M., Lind, K., Asplund, M., Barklem, P. S., Casey, A. R., Collet, R. & Leenaarts, J. (2017). 3D NLTE analysis of the most iron-deficient star, SMSS0313-6708. Astronomy & Astrophysics (A&A), 597, Article 6. https://doi.org/10.1051/0004-6361/201629202
Wang, E. X., Nordlander, T., Buder, S., Ciuca, I., Soen, A., Martell, S., Ness, M., Lind, K., McKenzie, M. & Stello, D. (2024). 3D NLTE Lithium abundances for late-type stars in GALAH DR3. Monthly Notices of the Royal Astronomical Society, 528(3), 5394-5411. https://doi.org/10.1093/mnras/stae385
Amarsi, A. M., Liljegren, S. & Nissen, P. E. (2022). 3D non-LTE iron abundances in FG-type dwarfs. Astronomy & Astrophysics (A&A), 668, Article A68. https://doi.org/10.1051/0004-6361/202244542
Amarsi, A. M., Barklem, P. S., Collet, R., Grevesse, N. & Asplund, M. (2019). 3D non-LTE line formation of neutral carbon in the Sun. Astronomy and Astrophysics, 624, Article A111. https://doi.org/10.1051/0004-6361/201833603
Zhang, Z., Chen, M. & Dong, MD. (2016). 3D Polymer Microfiber Architectures via Melt-electrospinning. Poster session presented at Advances in Cell Engineering, Imaging and Screening: VIB tools and technologies, Leuven, Belgium.
Castanheira, E. J., Maia, J. R., Monteiro, L. P. G., Sobreiro-Almeida, R., Wittig, N. K., Birkedal, H., Rodrigues, J. M. M. & Mano, J. F. (2024). 3D-printed injectable nanocomposite cryogel scaffolds for bone tissue regeneration. Materials Today Nano, 28, Article 100519. https://doi.org/10.1016/j.mtnano.2024.100519
Maurya, P. K., Christiansen, A. V., Fiandaca, G. & Auken, E. (2016). 3D resistivity and induced polarization for leachate plume identification at a challenging field site. In 22nd European Meeting of Environmental and Engineering Geophysics, Near Surface Geoscience 2016 European Association of Geoscientists and Engineers, EAGE. https://doi.org/10.3997/2214-4609.201601954
Pryet, A., Ramm, J., Chiles, J.-P., Auken, E., Deffontaines, B. & Violette, S. (2011). 3D resistivity gridding of large AEM datasets: A step toward enhanced geological interpretation. Journal of Applied Geophysics, 75(2), 277-283. https://doi.org/10.1016/j.jappgeo.2011.07.006
Normark, E., Andresen, K. J., Clausen, O. R. & Jensen, J. B. (2018). 3D seismic data acquired in shallow waters in Denmark by use of the p-cable system. In 3rd Applied Shallow Marine Geophysics Conference European Association of Geoscientists and Engineers. https://doi.org/10.3997/2214-4609.201802674
Hansen, J. P. V., Cartwright, J. A., Huuse, M. & Clausen, O. R. (2005). 3D seismic expression of fluid migration and mud remobilization on the Gjallar Ridge, offshore mid-Norway. Basin Research, 17(1), 125-139.
Kristensen, T. B., Clausen, O. R., Piotrowski, J. & Huuse, M. (2005). 3D seismic morphology of buried Quaternary Valleys - evidence for sub glacial origin. In R. Davies, H. Posamentier, J. Cartwrigth, L. Wood, V. Sare & P. Heino (Eds.), Ikke angivet The Geological Society of London and SEPM.
Khan, A. R., Leigland, L., Kohama, S., Cornea, A., Jespersen, S. N. & Kroenke, C. (2014). 3D Structure Tensor Analysis of Light Microscopy Data for Validating Diffusion MRI. Abstract from ISMRM-ESMRMB 2014, Milano, Italy.

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Brix, H., Koottatep, H. & Laugesen, C. H. (2007). Wastewater treatment in tsunami affected areas of Thailand by constructed wetlands. Water Science and Technology, 56(3), 69-74. https://doi.org/10.2166/wst.2007.528
Prevéy, J. S., Rixen, C., Rüger, N., Høye, T. T., Bjorkman, A. D., Myers-Smith, I. H., Elmendorf, S. C., Ashton, I. W., Cannone, N., Chisholm, C. L., Clark, K., Cooper, E. J., Elberling, B., Fosaa, A. M., Henry, G. H. R., Hollister, R. D., Jónsdóttir, I. S., Klanderud, K., Kopp, C. W. ... Wipf, S. (2019). Warming shortens flowering seasons of tundra plant communities. Nature Ecology & Evolution, 3(1), 45-52. https://doi.org/10.1038/s41559-018-0745-6
Andersen, L. W., Jacobsen, M. W., Lydersen, C., Semenova, V., Boltunov, A., Born, E. W., Wiig, O. & Kovacs, K. M. (2017). Walruses (Odobenus rosmarus rosmarus) in the Pechora Sea in the context of contemporary population structure of Northeast Atlantic walruses. Biological Journal of the Linnean Society, 122(4), 897-915. https://doi.org/10.1093/biolinnean/blx093
Kass, J. M., Vilela, B., Aiello-Lammens, M. E., Muscarella, R., Merow, C. & Anderson, R. P. (2018). WALLACE: A flexible platform for reproducible modeling of species niches and distributions built for community expansion. Methods in Ecology and Evolution, 9(4), 1151-1156. https://doi.org/10.1111/2041-210X.12945
Christiansen, F. B., Otto, S., Bergman, A. & Feldman, M. W. (1998). Waiting with and without Recombination: The Time to Production of a Double Mutant. Theoretical Population Biology, 53, 199-215.
Heinz, B., Birk, S., Kappler, A., Liedl, R., Geyer, T., Straub, K. L. & Bester, K. (2006). Vulnerability of a karst spring to waste water infiltration (Gallusquelle, Southwest Germany). Poster session presented at European Geosciences Union General Assembly 2006, Vienna, Austria.
Heinz, B., Birk, S., Kappler, A., Liedl, R., Geyer, T., Straub, K. L. & Bester, K. (2006). Vulnerability of a karst spring to waste water infiltration (Gallusquelle, Southwest Germany). Poster session presented at All About Karst & Water, Vienna, Austria.
Dohn, N. B. & Malte, H. (1998). Volume regulation in red blood cells. In J. M. Jørgensen, J. P. Lomholt, R. E. Weber & H. Malte (Eds.), The biology of hagfish (pp. 300-306). Chapman /.
Weber, R. E. & Rossetti, J. E. (1986). Volume regulation in osmotically-stressed coelomic erythrocytes from Priapulus caudatus (Phylum Priapuloidea). Journal of Experimental Marine Biology and Ecology, 95, 291-296.
Chiarenzelli, J., Scrudato, R., Arnold, G. L., Wunderlich, M. & Rafferty, D. (1996). Volatilization of polychlorinated biphenyls from sediment during drying at ambient conditions. Chemosphere, 33.
SORENSEN, J., CHRISTENSEN, D. & JØRGENSEN, BB. (1981). Volatile Fatty-Acids and Hydrogen as Substrates for Sulfate-Reducing Bacteria in Anaerobic Marine Sediment. Applied and Environmental Microbiology, 42(1), 5-11.
Tawakoli, P. N., Neu, T. R., Busck, M. M., Kuhlicke, U., Schramm, A., Attin, T., Wiedemeyer, D. B. & Schlafer, S. (2017). Visualizing the dental biofilm matrix by means of fluorescence lectin-binding analysis. Journal of Oral Microbiology, 9(1), Article 1345581. https://doi.org/10.1080/20002297.2017.1345581
Merl, T., Sedlacek, C. J., Pjevac, P., Fuchslueger, L., Sandén, T., Spiegel, H., Koren, K. & Giguere, A. T. (2024). Visualizing small-scale subsurface NH3 and pH dynamics surrounding nitrogen fertilizer granules and impacts on nitrification activity. Soil Biology and Biochemistry, 189, Article 109273. https://doi.org/10.1016/j.soilbio.2023.109273
Rotaru, A.-E., Schauer, R., Probian, C., Mussmann, M. & Harder, J. (2012). Visualization of candidate division OP3 cocci in limonene degrading methanogenic cultures. Journal of Microbiology and Biotechnology, 22(4), 457-461.
Lauridsen, H., Hansen, K., Pedersen, M. & Nielsen, T. W. (2010). Visualisation of animal anatomy using MRI and CT. Abstract from 2010 Society for Experimental Biology Annual Meeting, Prague, Czech Republic. http://www.sebiology.org/
Kuhn, J. H., Bào, Y., Bavari, S., Becker, S., Bradfute, S., Brauburger, K., Rodney Brister, J., Bukreyev, A. A., Caì, Y., Chandran, K., Davey, R. A., Dolnik, O., Dye, J. M., Enterlein, S., Gonzalez, J.-P., Formenty, P., Freiberg, A. N., Hensley, L. E., Hoenen, T. ... Nichol, S. T. (2014). Virus nomenclature below the species level: a standardized nomenclature for filovirus strains and variants rescued from cDNA. Archives of Virology, 159(5), 1229-1237. https://doi.org/10.1007/s00705-013-1877-2
Cieri, R. L., Turner, M. L., Carney, R. M., Falkingham, P. L., Kirk, A. M., Wang, T., Jensen, B., Novotny, J., Tveite, J., Gatesy, S. M., Laidlaw, D. H., Kaplan, H., Moorman, A. F. M., Howell, M., Engel, B., Cruz, C., Smith, A., Gerichs, W., Lian, Y. ... Farmer, C. G. (2021). Virtual and augmented reality: New tools for visualizing, analyzing, and communicating complex morphology. Journal of Morphology, 282(12), 1785-1800. https://doi.org/10.1002/jmor.21421
Chen, X., Liu, H., Weinbauer, M., Chen, B. & Jiao, N. (2011). Viral Dynamics in the surface water of the Western South China Sea in summer 2007. Aquatic Microbial Ecology, 63, 145-160.
Dupont, Y. L., Bang Madsen, H., Rasmussen, C., Hansted, L., Kryger, P., Ravn, H. P., Schmidt, I. K., Olesen, J. M., Holm, E., Langer, V., Sigsgaard, L., Eilenberg, J., Skov, C., Lassen, K. M., Ahrenfeldt, E. J., Calabuig, I., Holst, N., Boelt, B., Jensen, A. B. ... Termansen, M. (2019). Vi må redde bierne - mens tid er. Politiken, 5-6.
Wang, T. & Kjærgaard, P. C. (2014). Vi er mere end vores gener. Weekendavisen, Ideer, 12-13.
Maklakov, A. A., Bilde, T. & Lubin, Y. (2003). Vibratory courtship in a web-building spider: signalling quality or stimulating the female. Animal Behaviour, 66, 623-630.
Clausen, P., Olsen, K., Nielsen, R. D. & Hounisen, J. P. (2010). Vibes bestandsforhold. In P. Clausen & J. A. Kahlert (Eds.), Ynglefugle i Tøndermarsken og Margrethe Kog 1975-2009: En analyse af udviklingen i fuglenes antal og fordeling med anbefalinger til forvaltningstiltag (pp. 144-151). Danmarks Miljøundersøgelser, Aarhus Universitet.
Cedhagen, T. (1993). Vetenskaplig illustrationsteknik. Tjärnö Marinbiologiska Laboratorium, Göteborgs Universitet.