Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Blocher, P. D., Asaad, S., Mourik, V., Johnson, M., Morello, A. & Mølmer, K. (2022). Measuring out-of-time-ordered correlation functions without reversing time evolution. Physical Review A, 106(4), Article 042429. https://doi.org/10.1103/PhysRevA.106.042429

Tidemand-Lichtenberg, P., Aagaard, M., Ashik, A. S., Pedersen, C. & Julsgaard, B. (2022). Tunable infrared upconversion module for the 1.9 to 5.5 µm range. Optics Letters, 47(23), 6189-6192. https://doi.org/10.1364/OL.477053

Cuppen, H. M., Noble, J. A., Coussan, S., Redlich, B. & Ioppolo, S. (2022). Energy Transfer and Restructuring in Amorphous Solid Water upon Consecutive Irradiation. The Journal of Physical Chemistry A, 126(47), 8859-8870. https://doi.org/10.1021/acs.jpca.2c06314

Friis, E. M., Crane, P. R., Pedersen, K. R., Mendes, M. M. & Kvacek, J. (2022). The Early Cretaceous mesofossil flora of Catefica, Portugal: angiosperms. Fossil Imprint, 78(2), 341–424. https://doi.org/10.37520/fi.2022.016

Wang, B., Bonné, R., Zhang, Y., Wang, A. & Liu, W. (2022). Renewable energy driving microbial electrochemistry toward carbon neutral. Sustainable Horizons, 4, Article 100031. https://doi.org/10.1016/j.horiz.2022.100031

Rasmussen, S. E. & Zinner, N. T. (2022). Parameterized Two-Qubit Gates for Enhanced Variational Quantum Eigensolver. Annalen der Physik, 534(12), Article 2200338. https://doi.org/10.1002/andp.202200338

Rivera-Dean, J., Stammer, P., Maxwell, A. S., Lamprou, T., Tzallas, P., Lewenstein, M. & Ciappina, M. F. (2022). Light-matter entanglement after above-threshold ionization processes in atoms. Physical Review A, 106(6), Article 063705. https://doi.org/10.1103/PhysRevA.106.063705

Madsen, M. (2022). The Principles of the Flix Programming Language. In Onward! 2022 - Proceedings of the 2022 ACM SIGPLAN International Symposium on New Ideas, New Paradigms, and Reflections on Programming and Software, co-located with SPLASH 2022 (pp. 112-127). Association for Computing Machinery. https://doi.org/10.1145/3563835.3567661

Madsen, M., Starup, J. L. & Lhoták, O. (2022). Flix: A Meta Programming Language for Datalog. In Proceedings of the 4th International Workshop on the Resurgence of Datalog in Academia and Industry (Datalog-2.0 2022) (pp. 202-206). CEUR-WS.org. https://ceur-ws.org/Vol-3203/short8.pdf

Holm, H. & Jørgensen, P. (2022). The Q-shaped derived category of a ring. Journal of the London Mathematical Society, 106(4), 3263-3316. https://doi.org/10.1112/jlms.12662

Salimi, M., Javadi, A. H., Nazari, M., Bamdad, S., Tabasi, F., Parsazadegan, T., Ayene, F., Karimian, M., Gholami-Mahtaj, L., Shadnia, S., Jamaati, H., Salimi, A. & Raoufy, M. R. (2022). Nasal Air Puff Promotes Default Mode Network Activity in Mechanically Ventilated Comatose Patients: A Noninvasive Brain Stimulation Approach. Neuromodulation: Technology at the Neural Interface, 25(8), 1351-1363. https://doi.org/10.1016/j.neurom.2021.11.003

Afshar, M., Møllebjerg, A., Minero, G. A., Hollensteiner, J., Poehlein, A., Himmelbach, A., Lange, J., Meyer, R. L. & Brüggemann, H. (2022). Biofilm formation and inflammatory potential of Staphylococcus saccharolyticus: A possible cause of orthopedic implant-associated infections. Frontiers in Microbiology, 13, Article 1070201. https://doi.org/10.3389/fmicb.2022.1070201

Nielsen, H. & Andersen, C. (2022). Dommedagsuret. Aktuel Naturvidenskab, 2022(6), 42-46.

Hourfar, H., Aliakbari, F., Aqdam, S. R., Nayeri, Z., Bardania, H., Otzen, D. E. & Morshedi, D. (2023). The impact of α-synuclein aggregates on blood-brain barrier integrity in the presence of neurovascular unit cells. International Journal of Biological Macromolecules, 229, 305-320. https://doi.org/10.1016/j.ijbiomac.2022.12.134

Alijanvand, S. H., Ladefoged, L. K., Zubrienė, A., Sakalauskas, A., Christiansen, G., Dudutiene, V., Schiøtt, B., Matulis, D., Smirnovas, V. & Otzen, D. E. (2023). Inhibitory effects of fluorinated benzenesulfonamides on insulin fibrillation. International Journal of Biological Macromolecules, 227, 590-600. https://doi.org/10.1016/j.ijbiomac.2022.12.105

Musaeus, L. H., Van Mechelen, M., Caspersen, M. E. & Iversen, O. S. (2022). Empowerment through computational thinking: A literature survey. Acta Didactica Norden, 16(4), Article 1. https://doi.org/10.5617/adno.9152

Madsen, O. L. & Møller-Pedersen, B. (2022). What Object-Oriented Programming Was Supposed to Be: Two Grumpy Old Guys’ Take on Object-Oriented Programming . In Onward! 2022 - Proceedings of the 2022 ACM SIGPLAN International Symposium on New Ideas, New Paradigms, and Reflections on Programming and Software, co-located with SPLASH 2022: Proceedings of the 2022 ACM SIGPLAN International Symposium on New Ideas, New Paradigms, and Reflections on Programming and Software (pp. 220–239). Association for Computing Machinery. https://doi.org/10.1145/3563835.3568735

Olsen, J., Daugbjerg, T. S., C. Kinnaird, T., Kristiansen, S. M., Jacobsen, J. K., Parisi Presicce, C., Vitti, M. & Raja, R. (2022). Radiocarbon and OSL dating of Caesar’s Forum in Rome. Abstract from The 24th International Radiocarbon and 10th 14C and Archaeology Conference, Zürich, Switzerland. https://radiocarbon24.ethz.ch/wp-content/uploads/2022/08/A03_11.htm

Østergaard, R. H., Yan, Y., Venø, M. T., Dinesen, A., Kjaer-Sorensen, K., Oxvig, C., Rasmussen, J. T., Howard, K., Kjems, J., van Niel, G., Verweij, F. & Hayashi, Y. (2022). Extracellular Vesicle Biology Meets Zebrafish: Real-Time Visualization and RNA Profiling of Physiological Exosomes in the Bloodstream. Poster session presented at The Danish Society for Extracellular Vesicles (DSEV) 3rd Annual Symposium 2022, Roskilde, Denmark.

Mohammad-Beigi, H., Wijaya, W., Madsen, M., Hayashi, Y., Li, R., Maria Rovers, T. A., Jæger, T. C., Buell, A. K., Hougaard, A. B., Kirkensgaard, J. J. K., Westh, P., Ipsen, R. & Svensson, B. (2023). Association of caseins with β-lactoglobulin influenced by temperature and calcium ions: A multi-parameter analysis. Food Hydrocolloids, 137, Article 108373. https://doi.org/10.1016/j.foodhyd.2022.108373

Nielsen, K. H., Kragh, G. & Agergaard, T. E. (2022). Citizen science in Denmark at a critical stage: a national survey across research fields, institutions, and projects. P o S - Proceedings of Science, 418, Article 058. https://pos.sissa.it/418/058/pdf

Manolaki, P., Pastor, A., Karttunen, K., Guo, K. & Riis, T. (2022). Effects of temperature and nutrient enrichment on the Arctic moss Hygrohypnella ochracea growth and productivity. Polar Biology, 45(8), 1415-1425. https://doi.org/10.1007/s00300-022-03077-6

Wu, N., Guo, K., Suren, A. M. & Riis, T. (2023). Lake morphological characteristics and climatic factors affect long-term trends of phytoplankton community in the Rotorua Te Arawa lakes, New Zealand during 23 years observation. Water Research, 229, Article 119469. https://doi.org/10.1016/j.watres.2022.119469

Sand-Jensen, K., Riis, T., Kjær, J. E. & Martinsen, K. T. (2022). Stream-lake connectivity is an important control of fluvial CO2 concentrations and emissions in catchments. Earth and Space Science, 9(12), Article e2022EA002664. https://doi.org/10.1029/2022EA002664

Allen, P., Bain, D. R., Bridgland, D. R., Buisson, P., Buylaert, J. P., Bynoe, R., George, W. H., Haggart, B. A., Horne, D. J., Littlewood, E. M., Lord, A. R., March, A. C., Mercer, I., Mercer, R., Murray, A. S., Penkman, K. E. H., Preece, R. C., Ratford, J., Schreve, D. C. ... White, T. S. (2022). Mid-Late Quaternary Fluvial Archives near the Margin of the MIS 12 Glaciation in Southern East Anglia, UK: Amalgamation of Multi-Disciplinary and Citizen-Science Data Sources. Quaternary, 5(3), Article 37. https://doi.org/10.3390/quat5030037

Panyadee, P., Meunrew, J., Balslev, H. & Inta, A. (2022). Ethnobotany and Ecosystem Services in a Tidal Forest in Thailand. Sustainability, 14(10), Article 6322. https://doi.org/10.3390/su14106322

Kass, M. A., Grombacher, D., Griffiths, M., Vang, M. Ø., Liu, L. & Larsen, J. J. (2022). A steady-state approach to surface nuclear magnetic resonance. In Proceedings of the Symposium on the Application of Geophyics to Engineering and Environmental Problems, SAGEEP (pp. 54). J and N Group, Ltd.. https://www.eegs.org/assets/docs/Symposium/2022SAGEEP/AbstractsbyAuthor/Kass%2C%20A%20STEADY-STATE%20APPROACH%20TO%20SURFACE%20NUCLEAR%20MAGNETIC%20RESONANCE%20-%20SAGEEP%202022%20-%20205367449.pdf

Liu, L., Griffiths, M. P., Vang, M., Grombacher, D. J. & Larsen, J. J. (2021). Is it redundant to use model-based subtraction together with the reference noise cancellation? In 27th European Meeting of Environmental and Engineering Geophysics, Held at Near Surface Geoscience Conference and Exhibition 2021, NSG 2021 EAGE Publishing BV. https://doi.org/10.3997/2214-4609.202120108

Zev, S., Ringel, M., Driller, R., Loll, B., Brück, T. & Major, D. T. (2022). Understanding the competing pathways leading to hydropyrene and isoelisabethatriene. Beilstein Journal of Organic Chemistry, 18, 972-978. https://doi.org/10.3762/bjoc.18.97

Larsen, J. J., Lévy, L. & Asif, M. R. (2022). Removal of powerline noise in geophysical data sets with a scientific machine-learning based approach. IEEE Transactions on Geoscience and Remote Sensing, 60, Article 5923410. https://doi.org/10.1109/TGRS.2022.3223737

Marcussen, M. L. & Albrecht, S. H. (2022). The BANANA Project. VI. Close Double Stars are Well Aligned with Noticeable Exceptions: Results from an Ensemble Study Using Apsidal Motion and Rossiter-McLaughlin Measurements. Astrophysical Journal, 933(2), Article 227. https://doi.org/10.3847/1538-4357/ac75c2

Cunningham, A. C., Buylaert, J. P. & Murray, A. S. (2022). Attenuation of beta radiation in granular matrices: implications for trapped-charge dating. Geochronology, 4(2), 517-531. https://doi.org/10.5194/gchron-4-517-2022

Kveiborg, J. & Olsen, J. (2023). Targeted radiocarbon dating of animal bones from ritual wetland depositions in early Iron Age (Denmark). Journal of Archaeological Science: Reports, 47, Article 103766. https://doi.org/10.1016/j.jasrep.2022.103766

Curcio, D., Volckaert, K., Kutnyakhov, D., Agustsson, S. Y., Bühlmann, K., Pressacco, F., Heber, M., Dziarzhytski, S., Acremann, Y., Demsar, J., Wurth, W., Sanders, C. E. & Hofmann, P. (2022). Tracking the surface atomic motion in a coherent phonon oscillation. Physical Review B, 106(20), Article L201409. https://doi.org/10.1103/PhysRevB.106.L201409

Dalgaard, E., Bredesen, K., Mathiesen, A., Balling, N. & Gordon, A. (2021). 2D seismic AVO inversion for geothermal reservoir characterisation in Zealand Denmark. SEG Technical Program Expanded Abstracts, 2021, 3326-3330. https://doi.org/10.1190/segam2021-3594895.1

Dalgaard, E., Bredesen, K., Mathiesen, A. & Balling, N. (2019). De-risking geothermal plays by seismic reservoir characterisation. Paper presented at 1st Conference on Geophysics for Geothermal-Energy Utilization and Renewable-Energy Storage, Held at Near Surface Geoscience Conference and Exhibition 2019, NSG 2019, The Hague, Netherlands.

Madsen, J., Sode, L., Dahl, J. F., Corredig, M. & Schulz, H.-J. (2022). Visual Exploration of Rheological Test Results from Soft Materials. In Proceedings - 2022 1st International Workshop on Visualization in Testing of Hardware, Software, and Manufacturing, TestVis 2022 (pp. 1-7). IEEE. https://doi.org/10.1109/TestVis57757.2022.00006

Zona, D., Lafleur, P. M., Hufkens, K., Gioli, B., Bailey, B., Burba, G., Euskirchen, E. S., Watts, J. D., Arndt, K. A., Farina, M., Kimball, J. S., Heimann, M., Göckede, M., Pallandt, M., Christensen, T. R., Mastepanov, M., López-Blanco, E., Dolman, A. J., Commane, R. ... Oechel, W. C. (2023). Pan-Arctic soil moisture control on tundra carbon sequestration and plant productivity. Global change biology, 29(5), 1267-1281. https://doi.org/10.1111/gcb.16487

He, J., Steffen, J. H., Thulstrup, P. W., Pedersen, J. N., Sauerland, M. B., Otzen, D. E., Hawkins, C. L., Gourdon, P., Davies, M. J. & Hägglund, P. (2022). Anastellin impacts on the processing of extracellular matrix fibronectin and stimulates release of cytokines from coronary artery smooth muscle cells. Scientific Reports, 12(1), Article 22051. https://doi.org/10.1038/s41598-022-26359-9

Mahmood, H., Schneider, R., Frederiksen, R. R., Christiansen, A. V. & Stisen, S. (2022). Assessing Physical control of simulated drain flow dynamics. EGU22-6315. Abstract from EGU General Assembly 2022, Vienna, Austria. https://doi.org/10.5194/egusphere-egu22-6315

Schneider, R., Mahmood, H., Frederiksen, R. R., Højbjerg, A. L. & Stisen, S. (2022). Prediction of drain flow fraction at high spatial resolution by combining physically based models and machine learning. EGU22-3694. https://doi.org/10.5194/egusphere-egu22-3694

Olesen, J. L., Ianus, A., Østergaard, L., Shemesh, N. & Jespersen, S. N. (2023). Tensor denoising of multidimensional MRI data. Magnetic Resonance in Medicine, 89(3), 1160-1172. https://doi.org/10.1002/mrm.29478

Tolomeo, D., Traversa, D., Venuto, S., Ebbesen, K., Garcia Rodriguez, J. L., Tamma, G., Ranieri, M., Simonetti, G., Ghetti, M., Paganelli, M., Visci, G., Liso, A., Kok, K., Muscarella, L. A., Fabrizio, F. P., Frassanito, M. A., Lamanuzzi, A., Saltarella, I., Solimando, A. G. ... Storlazzi, C. T. (2023). circPVT1 and PVT1/AKT3 show a role in cell proliferation, apoptosis, and tumor subtype-definition in Small Cell Lung Cancer. Genes, Chromosomes & Cancer, 62(7), 377-391. https://doi.org/10.1002/gcc.23121

Riesgo, A., Santodomingo, N., Koutsouveli, V., Kumala, L., Leger, M. M., Leys, S. P. & Funch, P. (2022). Molecular machineries of ciliogenesis, cell survival, and vasculogenesis are differentially expressed during regeneration in explants of the demosponge Halichondria panicea. BMC Genomics, 23(1), Article 858. https://doi.org/10.1186/s12864-022-09035-0

Wang, T. & Alstrup, A. K. O. (2023). Tilpasset det ekstreme: sollys og døgnrytmer. Kaskelot, 2023(244), 8-11.

Skydsgaard, M. A. (2022). Videnskab er også lidenskab. Danske Museer, (1), 8-11. https://www.danskemuseer.dk/wp-content/uploads/2022/09/DM1-22_NY.pdf

Bomholt Larsen, A. S., Skydsgaard, M. A. & Kirkfeldt, S. S. (2019). Gentest og tandbørster. Hvordan sundhed blev fælles. 2D/3D (psysical products)

Lauridsen, K., Greve, L., Skydsgaard, M. A. & Kirkfeldt, S. S. (2021). Kroppen som data. 2D/3D (psysical products)

Jensen, M. R., Høgslund, S., Knudsen, S. W., Nielsen, J., Møller, P. R., Rysgaard, S. & Thomsen, P. F. (2023). Distinct latitudinal community patterns of Arctic marine vertebrates along the East Greenlandic coast detected by environmental DNA. Diversity and Distributions, 29(2), 316-334. https://doi.org/10.1111/ddi.13665

Mühlfenzl, K. S., Sardana, M., Skrydstrup, T. & Elmore, C. S. (2022). Visible-Light Enabled Late-Stage, Room-Temperature Aminocarbonylation of Aryl Iodides with Labeled Carbon Monoxide. ChemistrySelect, 7(46), Article e202203582. https://doi.org/10.1002/slct.202203582

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