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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kristensen, L. M. & Mailund (2003). Efficient Path Finding with the Sweep-Line Method using External Storage. In Proceedings of International Conference on Formal Engineering Methods (ICFEM 2003) (pp. 319-337)
Mailund, T. & Westergaard, M. (2004). Obtaining Memory-Efficient Reachability Graph Representations Using the Sweep-Line Method. In Proceedings of Tools and Algorithms for the Construction and Analysis of Systems (TACAS 2004) (pp. 177-191)
Mailund, Pedersen, C. N. S., Bardino, J., Vinter, B. & Karlsen, H. H. (2005). Initial experiences with GeneRecon on MiG. In Proceedings of The 2005 International Conference on Grid Computing and Applications (GCA)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Quartet Distance between General Trees. In Proceedings of International Conference on Numerical Analysis and Applied Mathematics (ICNAAM) (pp. 796-799)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Computing the Quartet Distance between Trees of Arbitrary Degree. In Proceedings of the 5th International Workshop on Algorithms in Bioinformatics (WABI) (pp. 77-88)
Billington, J., Gallasch, G. E., Kristensen, L. M. & Mailund (2004). Exploiting Equivalence Reduction and the Sweep-Line Method for Detecting Terminal States. IEEE Transactions on Systems, Man, and Cybernetics Part A:Systems and Humans, 34(1), 23-37.
Besenbacher, S., Mailund, Westh-Nielsen, L. & Pedersen, C. N. S. (2005). RBT—A Tool for Building Refined Buneman Trees. Bioinformatics, 21(8), 1711-1712.
Wernersson, R., Schierup, M. H., Jørgensen, F. G., Gorodkin, J., Panitz, F., Staerfeldt, HH., Christensen, O. F., Mailund, T., Hornshøj, H., Klein, A., Jun, W., Liu, B., Hu, S., Dong, W., Li, W., Wong, GK.-S., Yu, J., Wang, J., Bendixen, C. ... Bolund, L. (2005). Pigs in Sequence Space: A 0.66X Coverage Pig Genome Survey based on Shotgun Sequencing. BMC Genomics, 6(70). http://www.biomedcentral.com/1471-2164/6/70
Mailund, Brodal, G. S., Fagerberg, R., Pedersen, C. N. S. & Phillips, D. (2006). Recrafting the Neighbor-Joining Method. BMC Bioinformatics, 7(29).
Hankeln, T., Ebner, B., Fuchs, C., Gerlach, F., Haberkamp, M., Laufs, T. L., Roesner, A., Schmidt, M., Weich, B., Wystub, S., Saaler-Reinhardt, S., Reuss, S., Bolognesi, M., De Sanctis, D., Marden, M. C., Kiger, L., Moens, L., Dewilde, S., Nevo, E. ... Burmester, T. (2005). Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. Journal of Inorganic Biochemistry, 99, 110-119.
Herold, S. & Fago, A. (2005). Reactions of peroxynitrite with globin proteins and their possible physiological role. Comp. Biochem. Physiol., Part A., 142, 124-129.
Tengberg, A., Hall, P. O. J., Andersson, U., Lindén, B., Styrenius, O., Boland, G., de Bovee, F., Carlsson, B., Ceradini, S., Devol, A., Duivenveld, G., Friemann, J.-U., Glud, R. N., Khripounoff, A., Leather, J., Linke, P., Lund-Hansen, L. C., Rowe, G., Santschi, P. ... Witte, U. (2005). Intercalibration of benthic flux chambers. II. Hydrodynamic characterization and flux comparisons of 14 different designs. Mar. Chem., 94, 147-173.
Lundgren, R. & Olesen, J. M. (2005). The dense and highly connected world of Greenland plants and their pollinators. Arctic, Antarctic, and Alpine Research, 37, 514-520.
Møller, J. S. (2006). On the essential spectrum of the translation invariant Nelson model. In Mathematical Physics of Quantum Mechanics, Selected and Refereed Lectures from QMath9" (Lecture Notes in Physics Vol 690 ed., pp. 179-195). Springer.
Møller, J. S. (2000). Two-body short-range systems in a time-periodic electric field. Duke Mathematical Journal, 105, 135-166.
Nielsen, H. & Wistoft, B. (1998). Painting Technological Progress: P.S. Krøyer's The Industrialists (1904). Technology and Culture, 39(3), 408-433.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Til samfundets tarv - Forskningscenter Risøs historie. Danmarks Tekniske Universitet, Risø Nationallaboratoriet for Bæredygtig Energi.
Nielsen, H., Petersen, F., Jensen, H. S. & Nielsen, K. (1999). Risø and the Attempts to Introduce Nuclear Power into Denmark. Centaurus (Copenhagen), 41, 64-92.
Nielsen, H. (2002). Exposing the Flaws in the Nobel facade. Physics World, 15(4), 46-47.
Nielsen, H. & Nielsen, K. (2000). Le porte de la gloire. Les Cahiers de Science & Vie, 38-42.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Risø National research - Forty Years of Research in a Changing Society. Risø National laboratory.
Nielsen, H. & Clark, M. H. (1998). The Telegraphone. In E. D. Daniel, C. D. Mee & M. H. Clark (Eds.), Magnetic Recording: The First 100 Years (pp. 15-29). IEEE Press.
Nielsen, H. (1999). Telegrafonen - en opfindelse dømt til at mislykkes? Årbog / Danmarks Tekniske Museum, 6-25.
Nielsen, H. & Nielsen, K. (1999). The Danish Nobel Project. Newsletter of the Nobel Museum, 5-6.
Nielsen, H. (2005). Teknologi og samfund. In M. Hansen (Ed.), Almen Studieforberedelse - Videnskabernes temaer og historie (pp. 161-174). Gyldendal.
Nielsen, H., Nielsen, K. & Siggard Jensen, H. (2005). Skruen uden ende - Den vestlige teknologis historie. (3. ed.) Nyt Teknisk Forlag.
Jantzen, J. C. & Schwermer, J. (2005). Algebra. Springer.
Møller, J. S. (1993). Second quantization in a quon-algebra. J. Phys. A., 26, 4643-4652.
Herbst, I., Møller, J. S. & Skibsted, E. (1995). Spectral analysis of N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 261-294.
Herbst, I., Møller, J. S. & Skibsted, E. (1996). Asymptotic completeness for N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 509-535.
Brynskov, M. & Andersen, P. B. (2004). Habitats, Activities, and Signs. In J. Filipe & K. Liu (Eds.), Proceedings of The 7th International Workshop on Organisational Semiotics. (pp. 128-151). Institute for Systems and Technologies of Information, Control and Communication.
Arentoft, T., Bouzid, M. Y., Sterken, C., Freyhammer, L. M. & Frandsen, S. (2005). A dozen delta Scuti stars in the open cluster NGC 1817. PASP, 117(832), 601-614.
Andersen, L. W., Simonsen, V., Søgaard, B., Madsen, A. B., Pertoldi, C., Wind, P., Pihl, S., Fog, K. & Damgaard, C. F. (2005). Anvendelse af molekylærgenetiske markører i naturforvaltningen: Faglig rapport fra DMU, nr. 539.

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Chen, S. C., Chen, S., Musat, N., Kümmel, S., Ji, J., Lund, M. B., Gilbert, A., Lechtenfeld, O. J., Richnow, H. H. & Musat, F. (2024). Back flux during anaerobic oxidation of butane support archaea-mediated alkanogenesis. Nature Communications, 15(1), Article 9628. https://doi.org/10.1038/s41467-024-53932-9
Videnskabsklubben (2024). Biodiversitet. Videnskabsklubben.
Pedersen, M. B. (2024). Biosonar performance in echolocating bats. [PhD dissertation, Aarhus University]. Aarhus Universitet.
Marjakangas, E. L., Johnston, A., Santangeli, A. & Lehikoinen, A. (2024). Bird species' tolerance to human pressures and associations with population change. Global Ecology and Biogeography, 33(5), Article e13816. https://doi.org/10.1111/geb.13816
Speir, S. L., Tank, J. L., Pastor, A., Muller, M. F., Mastepanov, M. & Riis, T. (2024). Catchment-scale thawing and greening decreases long-term nitrogen export in NE Greenland. Environmental Research Letters, 19(5), Article 054031. https://doi.org/10.1088/1748-9326/ad3e8e
Vrchovecká, S., Amirbekov, A., Sázavská, T., Arias, C. A., Jespersen, E. A., Černík, M. & Hrabák, P. (2024). Chemical analysis of wetland plants to evaluate the bioaccumulation and metabolism of hexachlorocyclohexane (HCH). Science of the Total Environment, 921, Article 171141. https://doi.org/10.1016/j.scitotenv.2024.171141
Sahariah, P., Papi, F., Merz, K. L., Sigurjonsson, O. E., Meyer, R. L. & Nativi, C. (2024). Chitosan–saccharide conjugates for eradication of Pseudomonas aeruginosa biofilms. RSC Applied Polymers, 2(3), 461-472. https://doi.org/10.1039/D3LP00263B
Wang, C., Liu, L., Yin, M., Liu, B., Wu, Y., Eller, F., Gao, Y., Brix, H., Wang, T., Guo, W. & Salojärvi, J. (2024). Chromosome-level genome assemblies reveal genome evolution of an invasive plant Phragmites australis. Communications Biology, 7(1), Article 1007. https://doi.org/10.1038/s42003-024-06660-1
Rybiczka-Tešulov, M., Garritsen, O., Venø, M. T., Wieg, L., Dijk, R. V., Rahimi, K., Gomes-Duarte, A., Wit, M. D., van de Haar, L. L., Michels, L., van Kronenburg, N. C. H., van der Meer, C., Kjems, J., Vangoor, V. R. & Pasterkamp, R. J. (2024). Circular RNAs regulate neuron size and migration of midbrain dopamine neurons during development. Nature Communications, 15(1), Article 6773. https://doi.org/10.1038/s41467-024-51041-1
Guo, W. Y., Čuda, J., Skálová, H., Lambertini, C., Pierce, S., Lučanová, M., Brix, H., Meyerson, L. A. & Pyšek, P. (2024). Climate and genome size shape the intraspecific variation in ecological adaptive strategies of a cosmopolitan grass species. Functional Ecology, 38(9), 2054-2066. https://doi.org/10.1111/1365-2435.14613
Tian, Z., Chen, W., Maimaiti, M., Akberjan, E., Ni, M., Su, Z., Liu, B. & Lv, H. (2024). Climate and soil nutrients generate distinct diversity patterns across four elevational gradients within the same region. Acta Oecologica, 124, Article 104018. https://doi.org/10.1016/j.actao.2024.104018
Sydenham, M. A. K., Dupont, Y. L., Nielsen, A., Olesen, J. M., Bang Madsen, H., Skrindo, A. B., Rasmussen, C., S. Nowell, M., Venter, Z. S., Hegland, S. J., G. Helle, A., Skoog, D. I. J., Torvanger, M. S., Hanevik, K.-A., Hinderaker, S. E., Paulsen, T., Eldegard, K., Reitan, T. & Rusch, G. (2024). Climatic conditions and landscape diversity predict plant–bee interactions and pollen deposition in bee-pollinated plants. Ecography, 2024(9), Article e07138. https://doi.org/10.1111/ecog.07138
Majumder, A., Otter, P., Röher, D., Bhatnagar, A., Khalil, N., Gupta, A. K., Bresciani, R. & Arias, C. A. (2024). Combination of advanced biological systems and photocatalysis for the treatment of real hospital wastewater spiked with carbamazepine: A pilot-scale study. Journal of Environmental Management, 351, Article 119672. https://doi.org/10.1016/j.jenvman.2023.119672
Maliuk, A., Marghoub, A., Williams, C. J. A., Stanley, E., Kéver, L., Vickaryous, M., Herrel, A., Evans, S. E. & Moazen, M. (2024). Comparative analysis of osteoderms across the lizard body. Anatomical Record, 307(10), 3191-3203. https://doi.org/10.1002/ar.25418
Pang, S. E. H., Slik, J. W. F., Chisholm, R. A. & Webb, E. L. (2024). Conserving Southeast Asian trees requires mitigating both climate and land-use change. Nature Sustainability, 7(10), 1313-1323. https://doi.org/10.1038/s41893-024-01417-4
Cooper, D. L. M., Lewis, S. L., Sullivan, M. J. P., Prado, P. I., ter Steege, H., Barbier, N., Slik, F., Sonké, B., Ewango, C. E. N., Adu-Bredu, S., Affum-Baffoe, K., de Aguiar, D. P. P., Ahuite Reategui, M. A., Aiba, S. I., Albuquerque, B. W., de Almeida Matos, F. D., Alonso, A., Amani, C. A., do Amaral, D. D. ... Zent, S. (2024). Consistent patterns of common species across tropical tree communities. Nature, 625(7996), 728-734. https://doi.org/10.1038/s41586-023-06820-z
Andres, S. E., Atkinson, J., Coleman, D., Brazill-Boast, J., Wright, I. J., Allen, S. & Gallagher, R. V. (2024). Constraints of commercially available seed diversity in restoration: Implications for plant functional diversity. Plants People Planet, 6(6), 1341-1357. https://doi.org/10.1002/ppp3.10523
Schwindt, E., August, T. A., Vanderhoeven, S., McGeoch, M. A., Bacher, S., Galil, B. S., Genovesi, P., Hulme, P. E., Ikeda, T., Lenzner, B., Nuñez, M. A., Ordonez, A., Pauchard, A., Rahlao, S. J., Renard Truong, T., Roy, H. E., Sankaran, K. V., Seebens, H., Sheppard, A. W. ... Meyerson, L. A. (2024). Correction: Overwhelming evidence galvanizes a global consensus on the need for action against Invasive Alien Species (Biological Invasions, (2024), 26, 3, (621-626), 10.1007/s10530-023-03209-x). Biological Invasions, 26(6), 1985-1986. https://doi.org/10.1007/s10530-024-03280-y
Lauridsen, B. W., Knutz, P., Røy, H., Prins, L. & Hansen, K. H. (2024). CO2 storage Environmental Baseline. Paper presented at 5th EAGE Global Energy Transition Conference and Exhibition, GET 2024, Rotterdam, Netherlands. https://doi.org/10.3997/2214-4609.202421278