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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Kristensen, L. M. & Mailund (2003). Efficient Path Finding with the Sweep-Line Method using External Storage. In Proceedings of International Conference on Formal Engineering Methods (ICFEM 2003) (pp. 319-337)
Mailund, T. & Westergaard, M. (2004). Obtaining Memory-Efficient Reachability Graph Representations Using the Sweep-Line Method. In Proceedings of Tools and Algorithms for the Construction and Analysis of Systems (TACAS 2004) (pp. 177-191)
Mailund, Pedersen, C. N. S., Bardino, J., Vinter, B. & Karlsen, H. H. (2005). Initial experiences with GeneRecon on MiG. In Proceedings of The 2005 International Conference on Grid Computing and Applications (GCA)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Quartet Distance between General Trees. In Proceedings of International Conference on Numerical Analysis and Applied Mathematics (ICNAAM) (pp. 796-799)
Christiansen, C., Mailund, Pedersen, C. N. S. & Randers, M. (2005). Computing the Quartet Distance between Trees of Arbitrary Degree. In Proceedings of the 5th International Workshop on Algorithms in Bioinformatics (WABI) (pp. 77-88)
Billington, J., Gallasch, G. E., Kristensen, L. M. & Mailund (2004). Exploiting Equivalence Reduction and the Sweep-Line Method for Detecting Terminal States. IEEE Transactions on Systems, Man, and Cybernetics Part A:Systems and Humans, 34(1), 23-37.
Besenbacher, S., Mailund, Westh-Nielsen, L. & Pedersen, C. N. S. (2005). RBT—A Tool for Building Refined Buneman Trees. Bioinformatics, 21(8), 1711-1712.
Wernersson, R., Schierup, M. H., Jørgensen, F. G., Gorodkin, J., Panitz, F., Staerfeldt, HH., Christensen, O. F., Mailund, T., Hornshøj, H., Klein, A., Jun, W., Liu, B., Hu, S., Dong, W., Li, W., Wong, GK.-S., Yu, J., Wang, J., Bendixen, C. ... Bolund, L. (2005). Pigs in Sequence Space: A 0.66X Coverage Pig Genome Survey based on Shotgun Sequencing. BMC Genomics, 6(70). http://www.biomedcentral.com/1471-2164/6/70
Mailund, Brodal, G. S., Fagerberg, R., Pedersen, C. N. S. & Phillips, D. (2006). Recrafting the Neighbor-Joining Method. BMC Bioinformatics, 7(29).
Hankeln, T., Ebner, B., Fuchs, C., Gerlach, F., Haberkamp, M., Laufs, T. L., Roesner, A., Schmidt, M., Weich, B., Wystub, S., Saaler-Reinhardt, S., Reuss, S., Bolognesi, M., De Sanctis, D., Marden, M. C., Kiger, L., Moens, L., Dewilde, S., Nevo, E. ... Burmester, T. (2005). Neuroglobin and cytoglobin in search of their role in the vertebrate globin family. Journal of Inorganic Biochemistry, 99, 110-119.
Herold, S. & Fago, A. (2005). Reactions of peroxynitrite with globin proteins and their possible physiological role. Comp. Biochem. Physiol., Part A., 142, 124-129.
Tengberg, A., Hall, P. O. J., Andersson, U., Lindén, B., Styrenius, O., Boland, G., de Bovee, F., Carlsson, B., Ceradini, S., Devol, A., Duivenveld, G., Friemann, J.-U., Glud, R. N., Khripounoff, A., Leather, J., Linke, P., Lund-Hansen, L. C., Rowe, G., Santschi, P. ... Witte, U. (2005). Intercalibration of benthic flux chambers. II. Hydrodynamic characterization and flux comparisons of 14 different designs. Mar. Chem., 94, 147-173.
Lundgren, R. & Olesen, J. M. (2005). The dense and highly connected world of Greenland plants and their pollinators. Arctic, Antarctic, and Alpine Research, 37, 514-520.
Møller, J. S. (2006). On the essential spectrum of the translation invariant Nelson model. In Mathematical Physics of Quantum Mechanics, Selected and Refereed Lectures from QMath9" (Lecture Notes in Physics Vol 690 ed., pp. 179-195). Springer.
Møller, J. S. (2000). Two-body short-range systems in a time-periodic electric field. Duke Mathematical Journal, 105, 135-166.
Nielsen, H. & Wistoft, B. (1998). Painting Technological Progress: P.S. Krøyer's The Industrialists (1904). Technology and Culture, 39(3), 408-433.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Til samfundets tarv - Forskningscenter Risøs historie. Danmarks Tekniske Universitet, Risø Nationallaboratoriet for Bæredygtig Energi.
Nielsen, H., Petersen, F., Jensen, H. S. & Nielsen, K. (1999). Risø and the Attempts to Introduce Nuclear Power into Denmark. Centaurus (Copenhagen), 41, 64-92.
Nielsen, H. (2002). Exposing the Flaws in the Nobel facade. Physics World, 15(4), 46-47.
Nielsen, H. & Nielsen, K. (2000). Le porte de la gloire. Les Cahiers de Science & Vie, 38-42.
Nielsen, H., Nielsen, K., Petersen, F. & Jensen, H. S. (1998). Risø National research - Forty Years of Research in a Changing Society. Risø National laboratory.
Nielsen, H. & Clark, M. H. (1998). The Telegraphone. In E. D. Daniel, C. D. Mee & M. H. Clark (Eds.), Magnetic Recording: The First 100 Years (pp. 15-29). IEEE Press.
Nielsen, H. (1999). Telegrafonen - en opfindelse dømt til at mislykkes? Årbog / Danmarks Tekniske Museum, 6-25.
Nielsen, H. & Nielsen, K. (1999). The Danish Nobel Project. Newsletter of the Nobel Museum, 5-6.
Nielsen, H. (2005). Teknologi og samfund. In M. Hansen (Ed.), Almen Studieforberedelse - Videnskabernes temaer og historie (pp. 161-174). Gyldendal.
Nielsen, H., Nielsen, K. & Siggard Jensen, H. (2005). Skruen uden ende - Den vestlige teknologis historie. (3. ed.) Nyt Teknisk Forlag.
Jantzen, J. C. & Schwermer, J. (2005). Algebra. Springer.
Møller, J. S. (1993). Second quantization in a quon-algebra. J. Phys. A., 26, 4643-4652.
Herbst, I., Møller, J. S. & Skibsted, E. (1995). Spectral analysis of N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 261-294.
Herbst, I., Møller, J. S. & Skibsted, E. (1996). Asymptotic completeness for N-body Stark Hamiltonians. Communications in Mathematical Physics, 174, 509-535.
Brynskov, M. & Andersen, P. B. (2004). Habitats, Activities, and Signs. In J. Filipe & K. Liu (Eds.), Proceedings of The 7th International Workshop on Organisational Semiotics. (pp. 128-151). Institute for Systems and Technologies of Information, Control and Communication.
Arentoft, T., Bouzid, M. Y., Sterken, C., Freyhammer, L. M. & Frandsen, S. (2005). A dozen delta Scuti stars in the open cluster NGC 1817. PASP, 117(832), 601-614.
Andersen, L. W., Simonsen, V., Søgaard, B., Madsen, A. B., Pertoldi, C., Wind, P., Pihl, S., Fog, K. & Damgaard, C. F. (2005). Anvendelse af molekylærgenetiske markører i naturforvaltningen: Faglig rapport fra DMU, nr. 539.

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Magneville, C., Dedieu, S., Loiseau, N., Claverie, T. & Villéger, S. (2024). Detecting benefits of protection level on diversity facets in a sea of temporal scarcity. Aquatic Conservation: Marine and Freshwater Ecosystems, 34(1), Article e4062. https://doi.org/10.1002/aqc.4062
Dideriksen, A. K., Andersen, M. F., Priest, J., Eriksen, N. F., Frandsen, M. T., Melvad, C., Rasmussen, T. F., Nielsen, N. H. K., Strømsnes, C. T., Ahlebæk, M. J., Samsing, S., Larsen, T. B., Don, J., Pedersen, L. A. N., Jacobsen, R. H., Rysgaard, S., Kim, J. M., Bayer, R., Christensen, C. ... Karoff, C. (2024). DISCO-2 – an ambitious earth observing student CubeSat for arctic climate research. Frontiers in Remote Sensing, 5, Article 1474560. https://doi.org/10.3389/frsen.2024.1474560
Pasqualini, J., Graeber, D., Bartusch, A., Kümmel, S., Hernandez, Z. L. D., Musat, N., Sunjidmaa, N., Weitere, M. & Brauns, M. (2024). Disentangling effects of multiple agricultural stressors on benthic and hyporheic nitrate uptake. Biogeochemistry, 167(3), 287-299. https://doi.org/10.1007/s10533-024-01130-6
Fahimi, H., Soofi, M., Ahmadi, N., Qashqaei, A. T., Heidari, H., Bungum, H., Rech, B., Trepel, J. & Waltert, M. (2024). Distribution, behavior and diet of the Asiatic black bear in human modified landscapes. Basic and Applied Ecology, 80, 23-30. https://doi.org/10.1016/j.baae.2024.07.003
Wang, X., Miao, L., Huang, X., Mao, L., Cai, T., Svenning, J. C. & Feng, G. (2024). Diversification in birds is promoted by plant diversity, topographic heterogeneity and stable paleoclimate. Journal of Biogeography, 51(11), 2084-2093. https://doi.org/10.1111/jbi.14974
Midolo, G., Axmanová, I., Divíšek, J., Dřevojan, P., Lososová, Z., Večeřa, M., Karger, D. N., Thuiller, W., Bruelheide, H., Aćić, S., Attorre, F., Biurrun, I., Boch, S., Bonari, G., Čarni, A., Chiarucci, A., Ćušterevska, R., Dengler, J., Dziuba, T. ... Chytrý, M. (2024). Diversity and distribution of Raunkiær's life forms in European vegetation. Journal of Vegetation Science, 35(1), Article e13229. https://doi.org/10.1111/jvs.13229
Kaewsangsai, S., Panyadee, P., Panya, A., Pandith, H., Wangpakapattanawong, P., Balslev, H. & Inta, A. (2024). Diversity of Plant Colorant Species in a Biodiversity Hotspot in Northern Thailand. Diversity, 16(4), Article 194. https://doi.org/10.3390/d16040194
McCracken, K. G., Scott, G. R., Alza, L., Astie, A., Bakkeren, C., Bautista, E., Bulgarella, M., Cheek, R. G., Chua, B. A., Dawson, N. J., Diaz, A., Ivy, C. M., Frappell, P., Kopuchian, C., Lague, S. L., Maina, J. N., Munoz-Fuentes, V., Schnell, E. R., Sprenger, R. J. ... Smith, M. M. (2024). Diving at high altitude: O2 transport in the Ruddy Duck and Torrent Duck in the Andes. Occasional Papers of the Museum of Natural Science, Louisiana State University, 1(93), Article 1. https://doi.org/10.31390/opmns.093
Lee, S. F. H., Chapman, S. K., Mozdzer, T. J., Eller, F. & Langley, J. A. (2024). Does introduced European Phragmites australis experience belowground microbial enemy release in North America? Ecosphere, 15(8), Article e4952. https://doi.org/10.1002/ecs2.4952
Hordijk, I., Bialic-Murphy, L., Lauber, T., Routh, D., Poorter, L., Rivers, M. C., ter Steege, H., Liang, J., Reich, P. B., de-Miguel, S., Nabuurs, G. J., Gamarra, J. G. P., Chen, H. Y. H., Zhou, M., Wiser, S. K., Pretzsch, H., Paquette, A., Picard, N., Hérault, B. ... Crowther, T. W. (2024). Dominance and rarity in tree communities across the globe: Patterns, predictors and threats. Global Ecology and Biogeography, 33(10), Article e13889. https://doi.org/10.1111/geb.13889
Ebbesen, L. G., Strange, M. V., Gunaalan, K., Paulsen, M. L., Herrera, A., Nielsen, T. G., Shashoua, Y., Lindegren, M. & Almeda, R. (2024). Do weathered microplastics impact the planktonic community? A mesocosm approach in the Baltic Sea. Water Research, 255, Article 121500. https://doi.org/10.1016/j.watres.2024.121500
Nijman, T. P. A., van Giersbergen, Q., Heuts, T. S., Nouta, R., Boonman, C. C. F., Velthuis, M., Kruijt, B., Aben, R. C. H. & Fritz, C. (2024). Drainage effects on carbon budgets of degraded peatlands in the north of the Netherlands. Science of the Total Environment, 935, Article 172882. https://doi.org/10.1016/j.scitotenv.2024.172882
Wen, L., Zhao, K., Sun, H., Feng, G., Sun, Q., Liang, C., Li, Z., Wang, L. & Svenning, J. C. (2024). Drivers of desert plant beta diversity on the Qinghai–Tibet plateau. Ecology and Evolution, 14(2), Article e10993. https://doi.org/10.1002/ece3.10993
Andersen, M. K. (2024). ECR Spotlight – Mads Kuhlmann Andersen. Journal of Experimental Biology, 227(9), Article jeb.247832. https://doi.org/10.1242/jeb.247832
Vera-Puerto, I., Valdés, H., Laurens-Arredondo, L., López-Cortés, X., Quiroz, M., Hernández-Crespo, C., Belmonte, M., Campos, J. L., Martín-Monerris, M., Miglio, R., Molle, P. & Arias, C. A. (2024). Educating Professionals to Develop Nature-Based Solutions (NBS) as Infrastructure for Water Pollution Control: A Course Proposal. Sustainability, 16(16), Article 7199. https://doi.org/10.3390/su16167199
Leong, J. V., Mezzomo, P., Kozel, P., Volfová, T., de Lima Ferreira, P., Seifert, C. L., Butterill, P. T., Freiberga, I., Michálek, J., Matos-Maraví, P., Weinhold, A., Engström, M. T., Salminen, J. P., Segar, S. T., Sedio, B. E. & Volf, M. (2024). Effects of individual traits vs. trait syndromes on assemblages of various herbivore guilds associated with central European Salix. Oecologia, 205(3-4), 725-737. https://doi.org/10.1007/s00442-024-05569-0
Holmes, D. E., Woodard, T. L., Smith, J. A., Musat, F. & Lovley, D. R. (2024). Electrobiocorrosion by microbes without outer-surface cytochromes. mLife, 3(1), 110-118. https://doi.org/10.1002/mlf2.12111
Wei, F., Qiu, X., Wang, B., Lu, S., Zhang, L., Yi, G., Feng, Y., Nie, J., Shao, P., Liu, W., Yang, L., Wang, A. J. & Luo, X. (2024). Electrodeposited Palladium Nanoparticles Enhancing Atomic Hydrogen-Mediated Electrochemical Recovery of Antimony. ACS ES&T Engineering, 4(7), 1668-1678. https://doi.org/10.1021/acsestengg.4c00078
Adilkhanova, A., Ormantayeva, A., Kaziullayeva, A., Olaifa, K., Eghtesadi, N., Abbas, A. H., Calvio, C., Pham, T. T., Ajunwa, O. M. & Marsili, E. (2024). Electrofermentation increases concentration of poly γ-glutamic acid in Bacillus subtilis biofilms. Microbial Biotechnology, 17(3), Article e14426. https://doi.org/10.1111/1751-7915.14426
Wang, Z., Digel, L., Yuan, Y., Lu, H., Yang, Y., Vogt, C., Richnow, H.-H. & Nielsen, L. P. (2024). Electrogenic sulfur oxidation mediated by cable bacteria and its ecological effects. Environmental Science and Ecotechnology, 20, Article 100371. https://doi.org/10.1016/j.ese.2023.100371
He, L., Ye, S., Yuan, H., Yu, C., Ding, X., Zhao, G., Pei, S., Wang, J., Yang, S., Yu, X., Brix, H. & Laws, E. A. (2024). Enhanced sequestration of carbon in ocean sediments as a means to reduce global emissions: A case study from a coastal wetland restoration project in the Liaohe Delta, Northeast China. Palaeogeography, Palaeoclimatology, Palaeoecology, 648, Article 112286. https://doi.org/10.1016/j.palaeo.2024.112286
Jaramillo-Vivanco, T., Cámara, R. M., Cámara, M., Tejera, E., Balslev, H. & Álvarez-Suarez, J. M. (2024). Ethnobiology of edible palm weevil larvae Rhynchophorus palmarum L. (Curculionidae, Coleoptera), a common food source in Amazonian Ecuador. Journal of Insects as Food and Feed, 10(3), 427-441. https://doi.org/10.1163/23524588-20230135
Bora, J. K., Vardhan, V., Vijh, R. K., Deshmukh, A. V., Srinivas, Y., Mungi, N. A., Goswami, S., Jhala, H., Chauhan, J. S., Kumar, U. & Jhala, Y. (2024). Evaluating the potential for reintroducing the endangered wild water buffalo (Bubalus arnee) in Kanha National Park, central India. Restoration Ecology, 32(3), Article e14079. https://doi.org/10.1111/rec.14079
Mendes, S. B., Olesen, J. M., Memmott, J., Costa, J. M., Timóteo, S., Dengucho, A. L., Craveiro, L. & Heleno, R. (2024). Evidence of a European seed dispersal crisis. Science (New York, N.Y.), 386(6718), 206-211. https://doi.org/10.1126/science.ado1464