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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Paludan, K. & Bach-Nielsen, C. (Ed.) (2002). Når uddannelsesidéerne møder homo sapiens. In Dannelse Uddannelse Universiteter: Festskrift til Henning Lehmann den 31. januar 2002 (pp. 238-259). Aarhus Universitetsforlag.
Besenbacher, S., Mailund, T., Westh-Nielsen, L. & Pedersen, C. S. (2004). RBT -- A tool for building refined Buneman trees. Bioinformatics, doi:10.1093/bti195, in press.
Boni, M. F., Gog, J. R., Andreasen, V. & Christiansen, F. B. (2004). Influenza drift and epidemic size: the race between generating and escaping immunity. Theoretical Population Biology, 65, 179-191.
Brown, P. E., Christensen, O. F., Clough, H. E., Diggle, P. J., Hart, C. A., Hazel, S., Kemp, R., Leatherbarrow, A. J. H., Moore, A., Sutherst, J., Turner, J., Williams, N. J., Wright, E. J. & French, N. P. (2004). The frequency and spatial distribution of environmental campylobacter spp. Applied and Environmental Microbiology, 70, 6501-6511.
Christensen, O. F., Cassiani, G., Diggle, P. J., Ribeiro, P. J. & Andreotti, G. (2004). Statistical estimation of the relative efficiency of natural attenuation mechanisms in contaminated aquifers. Stochastic environmental research and risk assessment (SERRA), 18, 339-350.
Christiansen, F. B., Singh, R. S. (Ed.), Jain, S. (Ed.) & Uyenoyama, M. (Ed.) (2004). Density dependent selection. In The Evolution of Population Biology: Modern Synthesis (pp. 139-155). Cambridge University Press.
Einer-Jensen, K., Ahrens, P., Forsberg, R. & Lorenzen, N. (2004). Evolution of the fish rhabdovirus viral haemorrhagic septicaemia virus. Journal of General Virology, 85(5), 1167-1179.
Pedersen, J. S., Forsberg, R., Meyer, I. M. & Hein, J. (2004). An evolutionary model for protein-coding regions with conserved RNA structure. Mol Biol Evol. Oct;21, 10, 1913-1922.
Pedersen, J. S., Meyer, I. M., Forsberg, R., Simmonds, P. & nullJA, H. (2004). Comparative method for finding and folding RNA secondary structures within protein-coding regions. Nucleic Acids Res Sep 24, 32(16), 4925-4936.
Rafnar, T., Thorlacius, S., Steingrimsson, E., Schierup, M. H., Madsen, J. N., Calian, V., Eldon, B. J., Jonsson, T., Hein, J. & Thorgeirsson, S. S. (2004). The Icelandic Cancer Project--a population-wide approach to studying cancer. Nat Rev Cancer Jun, 4(6), 488-492.
Rivas, S., Rougon-Cardoso, A., Smoker, M., Schauser, L., Yoshioka, H. & Jones, J. D. G. (2004). CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence. EMBO Journal, 23, 2156-2165.
Willerslev, E., Hansen, A., Rønn, R., Brand, T. B., Barnes, I., Wiuf, C., Gilichinsky, D., Mitchell, D. & Cooper, A. (2004). Long-term persistence of bacterial DNA. Current Biology, 14, 9-10.
Wiuf, C., Zhao, K., Innan, H. & Nordborg, M. (2004). The probability and chromosomal extent of trans-specific polymorphisms. Genetics, 168, 2363-2372.
Arias, C. A. & Brix, H. (2005). Initial experience from a compact vertical flow constructed wetland treating single household wastewater. In J. Vymazal (Ed.), Natural and Constructed Wetlands: Nutrients, Metals and Management (pp. 52-64). Backhuys Publishers.
Foster, J. N., Greenwald, M. B., Kirkegaard, C., Pierce, B. C. & Schmitt, A. (2005). Exploiting Schemas in Data Synchronization. In DBPL 2005 (pp. 42-57). Springer LNCS.
Kiderlen, M. & Pfrang, A. (2005). Algorithms to estimate the rose of directions of a spatial fibre system. Journal of Microscopy, 219(2), 50-60.
Schauser, L., Fredslund, J., Madsen, L. H., Sandal, N. N. & Stougaard, J. (2005). A computational pipeline towards the development of comparative anchor tagged sequence (CATS) markers. In M. O. Humphrey (Ed.), Proceedings of the International Grassland Congress (IGC) (pp. 73-81). Wageningen Academic Publishers.
Gardner, R., Kiderlen, M. & Milanfar, P. (2006). Convergence of Algorithms for Reconstructing Convex Bodies and Directional Measures. Annals of Statistics, 34(3), 1331-1374.
Kanamori, N., Madsen, L. H., Radutoiu, E. S., Frantescu, M., Quistgaard, E. M. H., Miwa, H., Downie, J. A., James, E., Felle, H. H., Haaning, L. L., Jensen, T. H., Sato, S., Nakamura, Y., Tabata, S., Sandal, N. N. & Stougaard, J. (2006). A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. Proceedings of the National Academy of Sciences (PNAS), 103, 359-364.
Stetkær, H. (2005). Functional equations and matrix-valued spherical functions. Aequationes Mathematicae, 69, 271-292.
Kyng, K., May, A., Stevnsner, T. V., Becker, K. G., Kølvraa, S. & Bohr, V. (2005). Gene expression responses to DNA damage are alterd in human aging and in Werner Syndrome. Oncogene, 24, 5026-5042.
Fynbo, C. H., Lorentsen, R. H., Etzerodt, M., Thøgersen, H. C. & Holtet, T. L. (2005). Characterization of a recombinant granzyme B derivatives as a "restriction" protease. Prot. Expr. Purif, 39(2), 209-218.
Stetkær, H. (2005). Operator-valued spherical functions. Journal of Functional Analysis, 224, 338-351.
Elbassioni, K., Katriel, I., Kutz, M. & Mahajan, M. (2005). Simultaneous Matchings. In ISAAC 2005 (pp. 106-115). Springer.
Lorentsen, R. H., Fynbo, C. H., Thøgersen, H. C., Etzerodt, M. & Holtet, T. L. (2005). Expression, refolding and purification of recombinant human granzyme B. Prot. Expr. Purif, 39(1), 18-26.
Thorslund, T., von Kobbe, C., Harrigan, J. A., Indig, F. E., Christiansen, M., Stevnsner, T. V. & Bohr, V. (2005). Cooperation of the Cockayne syndrome group B protein and poly (ADP-ribose) polymerase 1 in the response to oxidative stress. Molecular and Cellular Biology, 25, 7625-7236.
Stetkær, H. (2006). d'Alembert's and Wilson's equations on Lie groups by P. de Place Friis. Zentralblatt für Mathematik, (Zbl 1060.39026).
Katriel, I. & van Hentenryck, P. (2005). Maintaining Longest Paths in Cyclic Graphs. In CP 2005 (pp. 358-372). Springer LNCS.
Bent, R., Katriel, I. & van Hentenryck, P. (2005). Sub-Optimality Approximations. In Springer LNCS 3709 (pp. 122-136). Springer.
Etzerodt, M. (2005). Multimerised HIV fusion inhibitors. (Patent No. WO 2005080418).
Braïda, B., Thøgersen, L., Wu, W. & Hiberty, P. C. (2002). Stability, Metastability, and Unstability of Three-Electron-Bonded Radical Anions. A Model ab Initio Theoretical Study. Journal of the American Chemical Society, 124, 11781-11790.
Dieter, Strutwolf, J. & Thøgersen, L. (2001). Investigation of some starting protocols for BDF (FIRM) in electrochemical digital simulation. Journal of Electroanalytical Chemistry, 512, 119-123.
Szalay, P. G., Thøgersen, L. S., Olsen, J., Kállay, M. & Gauss, J. (2004). Equilibrium Geometry of the Ethynyl (CCH) Radical. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 108, 3030-3034.
Thøgersen, L., Olsen, J., Köhn, A., Jørgensen, P., Salek, P. & Helgaker, T. (2005). The trust-region self-consistent field method in Kohn-Sham density-functional theory. Journal of Chemical Physics, 123, 074103-1-17.

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Schreiber, L., Kjeldsen, K. U., Tegetmeyer, H., Funch, P., López-Legentil, S., Dubilier, N. & Schramm, A. (2014). A tunicate-specific Endozoicomonas-lineage, and comparative genomicsand physiology of the symbiotic Endozoicomonas clade. Poster session presented at 15th International Symposium on Microbial Ecology, Seoul, Korea, Republic of.
Madsen, P. P. T., Aguilar de Soto, N., Tyack, P. L. & Johnson, M. (2014). Beaked whales. Current Biology, 24(16).
Gero, S., Milligan, M., Rinaldi, C., Francis, P., Gordon, F., Carlson, C., Steffen, A., Tyack, P., Evans, P. & Whitehead, H. (2014). Behavior and social structure of the sperm whales of Dominica, West Indies. Marine Mammal Science, 30(3), 905-922. https://doi.org/10.1111/mms.12086
Lefevre, S., Stecyk, J. A. W., Damsgaard, C., Pascale, D. R. & Nilsson, G. E. (2014). Being an air breather in the arctic: How does alaska blackfish survive hypoxia and submergence?. Abstract from 11th International Congress on the Biology of Fish, Edinburgh, United Kingdom.
Nygren, A., Dahlgren, T., Pleijel, F., Wiklund, H., Cedhagen, T., Erséus, C. & Andersson, M. (2014). Bertil Åkesson (1928-2013) obituary. Museum Victoria. Memoirs, 71, 343-345. http://museumvictoria.com.au/pages/58045/343-346_mmv71_nygren_obituary_3bp_web.pdf
Hylleberg, J. & Aungtonya, C. (2014). Biodiversity survey in Chalong Bay and surrounding areas, east coast of Phuket, Thailand. Phuket Marine Biological Center. Special Publications, 32, 81-112.
Olesen, J. M. (2014). Bjørnen sover – måske. Weekendavisen, (5), 10.
Beyer, J., Dzumaga, Y., DiMassimo, S. & Pearcy, A. (2014). Build a bridge and get over it: the effect of bridges over water on terrestrial animal presence. South African Journal of Wildlife Research, 44(2), 198-201.
Zhang, Y., Lv, T., Carvalho, P., Arias, C. A. & Brix, H. (2014). Can wetland plants take up two pharmaceutical compounds under hydroponic conditions?. Abstract from 2nd Pan-American Conference on Wetland Systems for the management, treatment and improvement of water quality, Morelia, Mexico.
Boscari, E., Pujolar, J. M., Dupanloup, I., Corradin, R. & Congiu, L. (2014). Captive breeding programs based on family groups in Polyploid sturgeons. PLoS One, 9(10), Article e110951. https://doi.org/10.1371/journal.pone.0110951
Danaei, G., Lu, Y., Singh, G. M., Carnahan, E., Stevens, G. A., Cowan, M. J., Farzadfar, F., Lin, J. K., Finucane, M. M., Rao, M., Khang, Y. H., Riley, L. M., Arian, D. M., Lim, S. S., Ezzati, M., Aamodt, G., Abdeen, Z., Abdella, N. A., Rahim, H. F. A. ... Zhang, J. (2014). Cardiovascular disease, chronic kidney disease, and diabetes mortality burden of cardiometabolic risk factors from 1980 to 2010: A comparative risk assessment. The Lancet Diabetes and Endocrinology, 2(8), 634-647. https://doi.org/10.1016/S2213-8587(14)70102-0
Olesen, J. M. (2014). Carl, dronten og andre ødyr. Weekendavisen, 14.
Storz, J., Natarajan, C., Tufts, D. M., Projecto-Garcia, J., Witt, C. C., Moriyama, H., Weber, R. E. & Fago, A. (2014). Causes and consequences of nonadditive mutational effects in the functional evolution of vertebrate hemoglobins. Abstract from XVIII Conference on Oxygen-Binding and Sensing Proteins, Sheffield, United Kingdom.
Churcher, A. M., Pujolar, J. M., Milan, M., Hubbard, P. C., Martins, R. S. T., Saraiva, J. L., Huertas, M., Bargelloni, L., Patarnello, T., Marino, I. A. M., Zane, L. & Canário, A. V. M. (2014). Changes in the gene expression profiles of the brains of male European eels (Anguilla Anguilla) during sexual maturation. BMC Genomics, 15, Article 799. https://doi.org/10.1186/1471-2164-15-799
Pirra, A., Lucas, M., Carvalho, P. & Peres, J. (2014). Characterization and bioremediation of meat industry wastewaters. Abstract from International Congress on Water, Waste and Energy Management, Porto, Portugal.
Saunders, C. J., Christensen, M., Finger, T. E. & Tizzano, M. (2014). Cholinergic neurotransmission links solitary chemosensory cells to nasal inflammation. Proceedings of the National Academy of Sciences (PNAS), 111(16), 6075-6080. https://doi.org/10.1073/pnas.1402251111
Ordonez Gloria, A., Martinuzzi, S., Radelo, V. C. & Williams, J. W. (2014). Combined speeds of climate and land-use change of the conterminous US until 2050. Nature Climate Change, 4(9), 811-816. https://doi.org/10.1038/NCLIMATE2337
Jensen, B., Oostra, R.-J., Moorman, A. F. M., Pedersen, M., Agger, P. & Planken, N. R. (2014). Comparative Aspects of Non‐compaction.
Burggren, W. W., Christoffels, V. M., Crossley II, D. A., Lauridsen, S. E., Farrell, A. P., Hedrick, M. S., Hicks, J. W., Jensen, B., Moorman, A. F. M., Mueller, C. A., Jensen, N. S., Taylor, E. W. & Wang, T. (2014). Comparative cardiovascular physiology: future trends, opportunities and challenges. Acta Physiologica, 210, 257-276. https://doi.org/10.1111/apha.12170
Arias, C. A. (2014). Contaminantes Emergentes. Abstract from 2nd Pan-American Conference on Wetland Systems for the management, treatment and improvement of water quality, Morelia, Mexico.
Cheever, BM., Whiles, M., Collins, SM., Hamilton, S., Dodds, W. K. & Riis, T. (2014). Continent-scale patterns of nitrogen cycling efficiencies in headwater stream food webs. Abstract from Joint Aquatic Sciences Meeting, Portland, Oregon, United States.
Trang, N. T. D., Long, L. M., Nguyen, N. T. T., Huong, D. T. T. & Brix, H. (2014). Controlling water quality in aquaculture ponds by constructed wetlands: a sustainable approach in the Mekong Delta, Vietnam. Journal of Science and Technology, 52(3A), 7-11.
Louise Dahl, K., Sparrevohn, C. R., Christensen, J. T. & Støttrup, J. G. (2014). Cryptic behaviour of juvenile turbot Psetta maxima L. and European flounder Platichthys flesus L. Open Journal of Marine Science, 4, 185-193. https://doi.org/10.4236/ojms.2014.43018
Vang, T. (2014). CTD måling. Aarhus University, DCE - Danish Centre for Environment and Energy. DCE - Teknisk anvisning fra Det Marine Fagdatacenter No. M03, ver.2 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Enghoff, H., Pedersen, J. & Toft, S. (2014). Danske mejere - en fauna i vækst. Entomologiske Meddelelser, 82(1), 1-12.
Baattrup-Pedersen, A., Larsen, S. E. & Riis, T. (2014). Dansk VandløbsPlanteIndeks (DVPI). Abstract from Ferskvandssymposium 2014 , Horsens, Denmark.