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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Paludan, K. & Bach-Nielsen, C. (Ed.) (2002). Når uddannelsesidéerne møder homo sapiens. In Dannelse Uddannelse Universiteter: Festskrift til Henning Lehmann den 31. januar 2002 (pp. 238-259). Aarhus Universitetsforlag.
Aagaard, L. & Villesen, P. (2004). Din indre virus. Aktuel Naturvidenskab, 6, 10-13.
Besenbacher, S., Mailund, T., Westh-Nielsen, L. & Pedersen, C. S. (2004). RBT -- A tool for building refined Buneman trees. Bioinformatics, doi:10.1093/bti195, in press.
Boni, M. F., Gog, J. R., Andreasen, V. & Christiansen, F. B. (2004). Influenza drift and epidemic size: the race between generating and escaping immunity. Theoretical Population Biology, 65, 179-191.
Brown, P. E., Christensen, O. F., Clough, H. E., Diggle, P. J., Hart, C. A., Hazel, S., Kemp, R., Leatherbarrow, A. J. H., Moore, A., Sutherst, J., Turner, J., Williams, N. J., Wright, E. J. & French, N. P. (2004). The frequency and spatial distribution of environmental campylobacter spp. Applied Environmental Microbiology, 70, 6501-6511.
Christensen, O. F., Cassiani, G., Diggle, P. J., Ribeiro, P. J. & Andreotti, G. (2004). Statistical estimation of the relative efficiency of natural attenuation mechanisms in contaminated aquifers. Stochastic environmental research and risk assessment (SERRA), 18, 339-350.
Christiansen, F. B., Singh, R. S. (Ed.), Jain, S. (Ed.) & Uyenoyama, M. (Ed.) (2004). Density dependent selection. In The Evolution of Population Biology: Modern Synthesis (pp. 139-155). Cambridge University Press.
Einer-Jensen, K., Ahrens, P., Forsberg, R. & Lorenzen, N. (2004). Evolution of the fish rhabdovirus viral haemorrhagic septicaemia virus. Journal of General Virology, 85(5), 1167-1179.
Pedersen, J. S., Forsberg, R., Meyer, I. M. & Hein, J. (2004). An evolutionary model for protein-coding regions with conserved RNA structure. Mol Biol Evol. Oct;21, 10, 1913-1922.
Pedersen, J. S., Meyer, I. M., Forsberg, R., Simmonds, P. & nullJA, H. (2004). Comparative method for finding and folding RNA secondary structures within protein-coding regions. Nucleic Acids Res Sep 24, 32(16), 4925-4936.
Rafnar, T., Thorlacius, S., Steingrimsson, E., Schierup, M. H., Madsen, J. N., Calian, V., Eldon, B. J., Jonsson, T., Hein, J. & Thorgeirsson, S. S. (2004). The Icelandic Cancer Project--a population-wide approach to studying cancer. Nat Rev Cancer Jun, 4(6), 488-492.
Rivas, S., Rougon-Cardoso, A., Smoker, M., Schauser, L., Yoshioka, H. & Jones, J. D. G. (2004). CITRX thioredoxin interacts with the tomato Cf-9 resistance protein and negatively regulates defence. EMBO Journal, 23, 2156-2165.
Willerslev, E., Hansen, A., Rønn, R., Brand, T. B., Barnes, I., Wiuf, C., Gilichinsky, D., Mitchell, D. & Cooper, A. (2004). Long-term persistence of bacterial DNA. Current Biology, 14, 9-10.
Wiuf, C., Zhao, K., Innan, H. & Nordborg, M. (2004). The probability and chromosomal extent of trans-specific polymorphisms. Genetics, 168, 2363-2372.
Arias, C. A. & Brix, H. (2005). Initial experience from a compact vertical flow constructed wetland treating single household wastewater. In J. Vymazal (Ed.), Natural and Constructed Wetlands: Nutrients, Metals and Management (pp. 52-64). Backhuys Publishers.
Foster, J. N., Greenwald, M. B., Kirkegaard, C., Pierce, B. C. & Schmitt, A. (2005). Exploiting Schemas in Data Synchronization. In DBPL 2005 (pp. 42-57). Springer LNCS.
Kiderlen, M. & Pfrang, A. (2005). Algorithms to estimate the rose of directions of a spatial fibre system. Journal of Microscopy, 219(2), 50-60.
Schauser, L., Fredslund, J., Madsen, L. H., Sandal, N. N. & Stougaard, J. (2005). A computational pipeline towards the development of comparative anchor tagged sequence (CATS) markers. In M. O. Humphrey (Ed.), Proceedings of the International Grassland Congress (IGC) (pp. 73-81). Wageningen Academic Publishers.
Gardner, R., Kiderlen, M. & Milanfar, P. (2006). Convergence of Algorithms for Reconstructing Convex Bodies and Directional Measures. Annals of Statistics, 34(3), 1331-1374.
Kanamori, N., Madsen, L. H., Radutoiu, E. S., Frantescu, M., Quistgaard, E. M. H., Miwa, H., Downie, J. A., James, E., Felle, H. H., Haaning, L. L., Jensen, T. H., Sato, S., Nakamura, Y., Tabata, S., Sandal, N. N. & Stougaard, J. (2006). A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. Proceedings of the National Academy of Sciences (PNAS), 103, 359-364.
Stetkær, H. (2005). Functional equations and matrix-valued spherical functions. Aequationes Mathematicae, 69, 271-292.
Kyng, K., May, A., Stevnsner, T. V., Becker, K. G., Kølvraa, S. & Bohr, V. (2005). Gene expression responses to DNA damage are alterd in human aging and in Werner Syndrome. Oncogene, 24, 5026-5042.
Fynbo, C. H., Lorentsen, R. H., Etzerodt, M., Thøgersen, H. C. & Holtet, T. L. (2005). Characterization of a recombinant granzyme B derivatives as a "restriction" protease. Prot. Expr. Purif, 39(2), 209-218.
Stetkær, H. (2005). Operator-valued spherical functions. Journal of Functional Analysis, 224, 338-351.
Elbassioni, K., Katriel, I., Kutz, M. & Mahajan, M. (2005). Simultaneous Matchings. In ISAAC 2005 (pp. 106-115). Springer.
Lorentsen, R. H., Fynbo, C. H., Thøgersen, H. C., Etzerodt, M. & Holtet, T. L. (2005). Expression, refolding and purification of recombinant human granzyme B. Prot. Expr. Purif, 39(1), 18-26.
Thorslund, T., von Kobbe, C., Harrigan, J. A., Indig, F. E., Christiansen, M., Stevnsner, T. V. & Bohr, V. (2005). Cooperation of the Cockayne syndrome group B protein and poly (ADP-ribose) polymerase 1 in the response to oxidative stress. Molecular and Cellular Biology, 25, 7625-7236.
Stetkær, H. (2006). d'Alembert's and Wilson's equations on Lie groups by P. de Place Friis. Zentralblatt für Mathematik, (Zbl 1060.39026).
Katriel, I. & van Hentenryck, P. (2005). Maintaining Longest Paths in Cyclic Graphs. In CP 2005 (pp. 358-372). Springer LNCS.
Bent, R., Katriel, I. & van Hentenryck, P. (2005). Sub-Optimality Approximations. In Springer LNCS 3709 (pp. 122-136). Springer.
Etzerodt, M. (2005). Multimerised HIV fusion inhibitors. (Patent No. WO 2005080418).
Braïda, B., Thøgersen, L., Wu, W. & Hiberty, P. C. (2002). Stability, Metastability, and Unstability of Three-Electron-Bonded Radical Anions. A Model ab Initio Theoretical Study. Journal of the American Chemical Society, 124, 11781-11790.
Dieter, Strutwolf, J. & Thøgersen, L. (2001). Investigation of some starting protocols for BDF (FIRM) in electrochemical digital simulation. Journal of Electroanalytical Chemistry, 512, 119-123.
Szalay, P. G., Thøgersen, L. S., Olsen, J., Kállay, M. & Gauss, J. (2004). Equilibrium Geometry of the Ethynyl (CCH) Radical. Journal of Physical Chemistry Part A: Molecules, Spectroscopy, Kinetics, Environment and General Theory, 108, 3030-3034.
Thøgersen, L., Olsen, J., Köhn, A., Jørgensen, P., Salek, P. & Helgaker, T. (2005). The trust-region self-consistent field method in Kohn-Sham density-functional theory. Journal of Chemical Physics, 123, 074103-1-17.

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Cedhagen, T. (2014). Higher education and scientific cooperation boost research programmes in biodiversity. Phuket Marine Biological Center. Special Publications, 32, 7-11.
Arias, C. A., Kilian, R., van Oirschot, D., de la Varga, D., Soto, M., Brix, H., Pascual , A., Herreo, L. & Alvarez, J. A. (2014). High-rate anaerobic and constructed wetland systems for municipal and industrial wastewater treatment. In IWA - World Water Congress & Exhibition
Jabaily, R. S., Shepherd, K. A., Gardner, A. G., Gustafsson, M. H. G., Howarth, D. G. & Motley, T. J. (2014). Historical biogeography of the predominantly Australian plant family Goodeniaceae. Journal of Biogeography, 41(11), 2057-2067. https://doi.org/10.1111/jbi.12363
Nielsen, M. G., Christian, K. & Birkmose, D. (2014). How do mangrove lining ants survive inundation. Abstract from 17th Congress of the International Union for the Study of Social Insects , Cairns, Australia.
Nielsen, M. G., Christian, K. & Birkmose, D. (2014). How do mangrove living ants survive inundation. Poster session presented at 17th Congress of the International Union for the Study of Social Insects , Cairns, Australia.
Revsbech, I. G., Shen, X., Chakravarti, R., Jensen, F. B., Thiel, B., Evans, A. L., Kindberg, J., Fröbert, O., Stuehr, D. J., Kevil, C. G. & Fago, A. (2014). Hydrogen sulfide and nitric oxide metabolites in the blood of free-ranging brown bears and their potential roles in hibernation. Free Radical Biology & Medicine, 73C, 349-357. https://doi.org/10.1016/j.freeradbiomed.2014.05.025
Hawkings, J., Wadham, J., Tranter, M., Raiswell, R., Benning, L. G., Statham, P. J., Tedstone, A., Nienow, P., Lee, K. & Telling, J. (2014). Ice sheets as a significant source of highly reactive nanoparticulate iron to the oceans. Nature Communications, 5. https://doi.org/10.1038/ncomms4929
Burow, L. C., Woebken, D., Marshall, I., Singer, S. W., Pett-Ridge, J., Prufert-Bebout, L., Spormann, A. M., Bebout, B. M., Weber, P. K. & Hoehler, T. M. (2014). Identification of Desulfobacterales as primary hydrogenotrophs in a complex microbial mat community. Geobiology, 12(3), 221-230. https://doi.org/10.1111/gbi.12080
Vang, T. & Hansen, J. W. (2014). Ilt i vandsøjlen. Aarhus University, DCE - Danish Centre for Environment and Energy. DCE - Teknisk anvisning fra Det Marine Fagdatacenter No. M04 ver.2 http://bios.au.dk/videnudveksling/til-myndigheder-og-saerligt-interesserede/fagdatacentre/fdcmarintny/ta2011-2015/
Croese, E., Jeremiasse, A. W., Marshall, I., Spormann, A. M., Euverink, G.-J. W., Geelhoed, J. S., Stams, A. J. M. & Plugge, C. M. (2014). Influence of setup and carbon source on the bacterial community of biocathodes in microbial electrolysis cells. Enzyme and Microbial Technology, 61-62, 67-75. https://doi.org/10.1016/j.enzmictec.2014.04.019
Avila, C., Arias, C. A., Otter, P., Kilian, R., Istenic, D., Rolletscheck, M., Molle, P., Khalil, N., Brix, H. & Alvarez, J. A. (2014). Integral Wastewater Treatment and Reuse Using Constructed Wetlands and Solar Disinfection In India. Poster session presented at IWA Specialist Conference: Sustainable Wastewater Treatment and Resource Recovery. , Kathmandu, Nepal.
Cheviron, Z. A., Natarajan, C., Projecto-Garcia, J., Eddy, D. K., Jones, J., Carling, M. D., Witt, C. C., Moriyama, H., Weber, R. E., Fago, A. & Storz, J. F. (2014). Integrating Evolutionary and Functional Tests of Adaptive Hypotheses: A Case Study of Altitudinal Differentiation in Hemoglobin Function in an Andean Sparrow, Zonotrichia capensis. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msu234
Lauridsen, S. E., Slay, C., Abe, A. S., Hicks, J. W. & Wang, T. (2014). Intraspecific scaling of arterial blood pressure in the Burmese python. Journal of Experimental Biology, 217(13), 2232-2234. https://doi.org/10.1242/jeb.099226
Wang, T. (2014). I slangens mave. Politiken, Viden, 4.
Junsongduang, A., Balslev, H., Inta, A., Jampeetong, A. & Wangpakapattanawong, P. (2014). Karen and Lawa medicinal plant use: Uniformity or ethnic divergence? Journal of Ethnopharmacology, 151(1), 517-527. https://doi.org/10.1016/j.jep.2013.11.009
Wang, T. (2014). Krybdyrenes halve hjerte og kredsløbets udvikling. In C. Rabæk Kjaer (Ed.), 25 Søforklaringer: Naturvidenskabelige Fortællingen fra Søauditorierne (pp. 263-277). Aarhus Universitetsforlag.
Brix, H., Ye, S., Laws, E. A., Sun, D., Li, G., Ding, X., Yuan, H., Zhao, G., Wang, J. & Pei, S. (2014). Large-scale management of common reed, Phragmites australis, for paper production: A case study from the Liaohe Delta, China. Ecological Engineering, 73, 760-769. https://doi.org/10.1016/j.ecoleng.2014.09.099
Tank, J., Aubeneau, A., Reisinger, A., Baker, M., Hall, R., Levi, P., Riis, T. & Rosi-Marshall, E. (2014). Linking biogeochemistry and hydrodynamics in rivers. Abstract from Joint Aquatic Sciences Meeting, Portland, Oregon, United States.
Fago, A., Revsbech, I. G., Shen, X., Evans, A., Fröbert, O. & Kevil, C. G. (2014). Mechanisms for suppression of oxygen delivery and consumption in hibernating brown bears. Abstract from 2014 APS Intersociety Meeting: Comparative Approaches to Grand Challenges in Physiology , San Diego, United States.