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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Christensen, S., Jensen, K., Mailund, T., Weber, H. (Ed.), Ehrig, H. (Ed.) & Reisig, W. (Ed.) (2001). State Space Methods for Timed Petri Nets. In Proc. of 2nd Int. Coll. on Petri Net Technologies for Modelling Communication Based Systems: DFG Research Group "Petri Net Technology" (pp. 33-42). DFG-Forschergruppe Petri Net Technologie.
Christensen, S., Kristensen, L. M., Aalst, W. M. P. V. D. (Ed.), Colom, J.-M. (Ed.), Kordon, F. (Ed.), Kotsis, G. (Ed.) & Moldt, D. (Ed.) (2003). State Space Analysis of Hierarchical Coloured Petri Nets. LINCOM Studies in Computer Science: LSCS 01: Petri Net Approaches for Modelling and Validation, (1), 1-16.
Christensen, S., Kristensen, L. M., Mailund, T., Margaria, T. (Ed.) & Yi, W. (Ed.) (2001). A Sweep-Line Method for State Space Exploration. In Lecture Notes in Computer Science (Lecture Notes in Computer Science 2031 ed., Vol. 2031, pp. 450-464). Springer.
Clemensen, J., Larsen, S. B. & Bardram, J. E. (2004). Developing Pervasive e-Health for Moving Experts from Hospital to Home. In Ikke angivet (pp. 441-448). International Association for Development, IADIS.
Clemensen, J., Larsen, S. B. & Ejskjær, N. (2004). Connecting Home and Clinican, Treatment of Diabetic Foot Ulcers at Home. In The CHI2004 workshop on HCI and Homecare: Connecting Families and Clinicians
Corry, A. V. (2001). Patterns in Software Development. (DAIMI PhD Dissertation PD-01-1 ed.) Department of Computer Science.
Cramer, R. & Damgård, I. B. (2001). Secure Distributed Linear Algebra in a Constant Number of Rounds. In J. Killian (Ed.), Advances in Cryptology - CRYPTO 2001: 21st Annual International Cryptology Conference, Santa Barbara, California, USA, August 19-23, 2001 Proceedings (pp. 119-137). Springer. https://doi.org/10.1007/3-540-44647-8_7
Cramer, R., Damgård, I. B. & Fehr, S. (2001). On the Cost of Reconstructing a Secret or VSS with Optimal Reconstruction. In J. Killian (Ed.), Advances in Cryptology - CRYPTO 2001: 21st Annual International Cryptology Conference, Santa Barbara, California, USA, August 19-23, 2001 Proceedings (pp. 503-524). Springer. https://doi.org/10.1007/3-540-44647-8_30
Cramer, R., Damgård, I. B. & Nielsen, J. B. (2001). Multiparty Computation from Threshold Homomorphic Encryption. In B. Pfitzmann (Ed.), Advances in Cryptology - EUROCRYPT 2001: International Conference on the Theory and Application of Cryptographic Techniques Innsbruck, Austria, May 6-10, 2001 Proceedings (pp. 280-300). Springer. https://doi.org/10.1007/3-540-44987-6_18
Crazzolara, F., Winskel, G., Agrawal, M. (Ed.) & Seth, A. (Ed.) (2002). Composing Strand Spaces. In Ikke angivet (2556 of Lecture Notes in Computer Science ed., Vol. 2556/2002, pp. 97-108). Springer.
Crazzolara, F. & Winskel, G. (2001). Events in Security Protocols. In Proceedings of the 8th ACM conference on Computer and Communications Security (pp. 96-105). Association for Computing Machinery.
Crazzolara, F., Winskel, G., Charpentier, M. (Ed.) & Sanders, B. (Ed.) (2001). Petri Nets in Cryptographic Protocols. In Proceedings of the 15th International Parallel & Distributed Processing Symposium (IPDPS-01) (Vol. 15th International Parallel and Distributed Processing Symposium (IPDPS'01) Workshops, pp. 149). IEEE Press.
Crepeau, C., Legare, F. & Salvail, L. (2001). How to Convert a Flavor of Quantum Bit Commitment. In Advances in cryptology - EUROCRYPT 2001: Lecture Notes in Computer Science 2045 (Vol. 2045, pp. 60-77). Springer. http://www.cki.au.dk/publication.html
Cryan, M. & Miltersen, P. B. (2001). On pseudorandom generators in NC0. In J. Sgall, A. Pultr & P. Kolman (Eds.), Mathematical Foundations of Computer Science 2001: Lecture Notes in Computer Science (Lecture Notes in Computer Science 2136 ed., Vol. 2136/2001, pp. 272-284). Springer.
Crépeau, C., Dumais, P., Mayers, D. & Salvail, L. (2003). Computational Collapse of Quantum State with Application to Oblivious Transfer. BRICS Report Series, (RS-03-37).
Crépeau, C., Dumais, P., Mayers, D., Salvail, L. & Naor, M. (Ed.) (2004). Computational Collapse of Quantum State with Application to Oblivious Transfer. In Ikke angivet (2951 i Lecture Notes in Computer Science ed., pp. 374-393). Springer.
Crépeau, C., Dumais, P., Mayers, D. & Salvail, L. (2003). On the Computational Collapse of Quantum Information. BRICS Report Series, (RS-03-3).
Damgård, I. B. & Cramer, R. (2004). Secret-Key Zero-Knowlegde and Non-interactive Verifiable Exponentiation. In M. Naor (Ed.), Theory of Cryptography: First Theory of Cryptography Conference, TCC 2004, Cambridge, MA, USA, February 19-21, 2004. Proceedings (pp. 223-237). Springer. https://doi.org/10.1007/978-3-540-24638-1_13
Damgård, I. B., Fehr, S., Morozov, K. & Salvail, L. (2004). Unfair Noisy Channels and Oblivious Transfer. In M. Naor (Ed.), Theory of Cryptography: First Theory of Cryptography Conference, TCC 2004, Cambridge, MA, USA, February 19-21, 2004. Proceedings (pp. 355-373). Springer. https://doi.org/10.1007/978-3-540-24638-1_20
Damgård, I. B., Fehr, S. & Salvail, L. (2004). Zero-Knowledge Proofs and String Commitments Withstanding Quantum Attacks. In M. Franklin (Ed.), Advances in Cryptology - CRYPTO 2004: 24th Annual International Cryptology Conference, Santa Barbara, California, USA, August 15-19, 2004. Proceedings (pp. 254-272). Springer. https://doi.org/10.1007/978-3-540-28628-8_16
Damgård, I. B. & Frandsen, G. S. (2003). Efficient Algorithms for gcd and Cubic Residuosity in the Ring of Eisenstein Integers. In A. Lingas & B. J. Nilsson (Eds.), Fundamentals of Computation Theory (pp. 109-117). Springer. https://doi.org/10.1007/978-3-540-45077-1_11
Damgård, I. B. & Fujisaki, E. (2002). A Statistically-Hiding Integer Commitment Scheme Based on Groups with Hidden Order. In Y. Zheng (Ed.), Advances in Cryptology - ASIACRYPT 2002: 8th International Conference on the Theory and Application of Cryptology and Information Security Queenstown, New Zealand, December 1-5, 2002 Proceedings (pp. 77-85). Springer. https://doi.org/10.1007/3-540-36178-2_8
Damgård, I. B. & Groth, J. (2003). Non-interactive and Reusable Non-malleable Commitment Schemes. In Proceedings of the thirty-fifth annual ACM symposium on Theory of computing (pp. 426-437). Association for Computing Machinery. https://doi.org/10.1145/780542.780605
Damgård, I. B., Groth, J., Salomonsen, G. & Gritzalis, D. (Ed.) (2002). The Theory and Implementation of Electronic Voting Systems. In Secure Electronic Voting (Vol. 7, pp. 77-100). Kluwer Academic Publishers.
Damgård, I. B. & Jurik, M. J. (2001). A Generalisation, a Simplification and some Applications of Paillier's Probabilistic Public-Key System. In K. Kim (Ed.), Public Key Cryptography: 4th International Workshop on Practice and Theory in Public Key Cryptosystems, PKC 2001 Cheju Island, Korea, February 13-15, 2001 Proceedings (pp. 119-136). Springer. https://doi.org/10.1007/3-540-44586-2_9
Damgård, I. B. & Jurik, M. J. (2003). A Length-Flexible Threshold Cryptosystem with Applications. In R. Safavi-Naini & J. Seberry (Eds.), Information Security and Privacy: 8th Australasian Conference, ACISP 2003 Wollongong, Australia, July 9–11, 2003 Proceedings (pp. 350-364). Springer. https://doi.org/10.1007/3-540-45067-X_30
Damgård, I. B. & Jurik, M. J. (2002). Client/Server Tradeoffs for On-line Elections. In D. Naccache & P. Pailier (Eds.), Public Key Cryptography: 5th International Workshop on Practice and Theory in Public Key Cryptosystems, PKC 2002 Paris, France, February 12-14, 2002 Proceedings (pp. 125-140). Springer. https://doi.org/10.1007/3-540-45664-3_9
Damgård, I. B. & Jurik, M. J. (2003). Scalable Key-Escrow. BRICS Report Series, (RS-03-22).
Damgård, I. B. & Koprowski, M. (2002). Generic Lower Bounds for Root Extraction and Signature Schemes in General Groups. In L. R. Knudsen (Ed.), Advances in Cryptology - EUROCRYPT 2002: International Conference on the Theory and Applications of Cryptographic Techniques Amsterdam, The Netherlands, April 28 - May 2, 2002 Proceedings (pp. 256-271). Springer. https://doi.org/10.1007/3-540-46035-7_17
Damgård, I. B. & Koprowski, M. (2001). Practical Threshold RSA Signatures Without a Trusted Dealer. In B. Pfitzmann (Ed.), Advances in Cryptology - EUROCRYPT 2001: International Conference on the Theory and Application of Cryptographic Techniques Innsbruck, Austria, May 6-10, 2001 Proceedings (pp. 152-165). Springer. https://doi.org/10.1007/3-540-44987-6_10
Damgård, I. B. & Nielsen, J. B. (2002). Expanding Pseudorandom Functions: or: From Known-Plaintext Security to Chosen-Plaintext Security. In M. Yung (Ed.), Advances in Cryptology - CRYPTO 2002: 22nd Annual International Cryptology Conference Santa Barbara, California, USA, August 18-22, 2002 Proceedings (pp. 449-464). Springer. https://doi.org/10.1007/3-540-45708-9_29
Damgård, I. B. & Nielsen, J. B. (2002). Perfect Hiding and Perfect Binding Universally Composable Commitment Schemes with Constant Expansion Factor. In M. Yung (Ed.), Advances in Cryptology - CRYPTO 2002: 22nd Annual International Cryptology Conference Santa Barbara, California, USA, August 18-22, 2002 Proceedings (pp. 581-596). Springer. https://doi.org/10.1007/3-540-45708-9_37
Damgård, I. B. & Nielsen, J. B. (2003). Universally Composable Efficient Multiparty Computation from Threshold Homomorphic Encryption. In D. Boneh (Ed.), Advances in Cryptology - CRYPTO 2003: 23rd Annual International Cryptology Conference, Santa Barbara, California, USA, August 17-21, 2003. Proceedings (pp. 247-264). Springer. https://doi.org/10.1007/978-3-540-45146-4_15
Damgård, I. B., Pedersen, T. B. & Salvail, L. (2004). On the Key-Uncertainty of Quantum Ciphers and the Computational Security of One-way Quantum Transmission. In C. Cachin & J. Camenisch (Eds.), Advances in Cryptology - EUROCRYPT 2004: International Conference on the Theory and Applications of Cryptographic Techniques, Interlaken, Switzerland, May 2-6, 2004. Proceedings (pp. 91-108). Springer. https://doi.org/10.1007/978-3-540-24676-3_6
Damian, D. & Danvy, O. (2001). A Simple CPS Transformation of Control-Flow Information. BRICS Report Series, (RS-01-55).
Damm, C. H. & Hansen, K. M. (2002). Distributing Knight. Using Type-Based Publish/Subscribe for Building Distributed Collaboration Tools. In K. Østerbye (Ed.), Proceedings of the Nordic workshop on Software Development Tools and Techniques: NWPER 2002 (pp. 155-158) http://www.it-c.dk/people/kasper/NWPER2002/papers/damm.pdf
Danvy, O. (2003). A Journey from Interpreters to Compilers and Virtual Machines. In F. Pfenning & Y. Smaragdakis (Eds.), Generative Programming and Component Engineering: Second International Conference, GPCE 2003, Erfurt, Germany, September 22-25, 2003. Proceedings (pp. 117). Springer. https://doi.org/10.1007/978-3-540-39815-8_7
Danvy, O. (2002). A New One-Pass Transformation into Monadic Normal Form. BRICS Report Series, (RS-02-52).
Danvy, O. (2003). A New One-Pass Transformation into Monadic Normal Form. In G. Hedin (Ed.), Compiler Construction: 12th International Conference, CC 2003 Held as Part of the Joint European Conferences on Theory and Practice of Software, ETAPS 2003 Warsaw, Poland, April 7–11, 2003 Proceedings (pp. 77-89). Springer. https://doi.org/10.1007/3-540-36579-6_6
Danvy, O. (2004). From Reduction-Based to Reduction-Free Normalization. BRICS Report Series, (RS-04-30).
Danvy, O. (2004). On Evaluation Contexts, Continuations, and the Rest of the Computation. In Ikke angivet (CSR-04-1 of Technical Reports ed., pp. 13-23). School of Computer Science, University of Birmingham.
Danvy, O. (Ed.) (2003). Special Issue of Higher-Order and Symbolic Computation: Partial Evaluation and Semantics-Based Program Manipulation. In P. Thiemann (Ed.), Higher-Order and Symbolic Computation: Theme Issue on Partial Evaluation and Semantics-Based Program Manipulation (PEPM 2002) (Vol. 16(4), pp. 295-401). Springer.
Danvy, O., Henglein, F. (Ed.), Mairson, H. (Ed.) & Pettorossi, A. (Ed.) (2003). Special issue of Higher-Order and Symbolic Computation: - in memory of Bob Paige. Springer.

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Fashing, P. J., Nguyen, N., Demissew, S., Gizaw, A., Atickem, A., Mekonnen, A., Nurmi, N. O., Kerby, J. T. & Stenseth, N. C. (2022). Ecology, evolution, and conservation of Ethiopia’s biodiversity. Proceedings of the National Academy of Sciences (PNAS), 119(50), Article e2206635119. https://doi.org/10.1073/pnas.2206635119
Colon, C. P., Botton, M. L., Funch, P., Hoffgaard, E. E., Mandeep, K. & Mansfield, K. (2022). Ecology of Juvenile American Horseshoe Crabs (Limulus polyphemus) at Plumb Beach, Jamaica Bay, New York. In International Horseshoe Crab Conservation and Research Efforts: 2007- 2020: Conservation of Horseshoe Crabs Species Globally (pp. 669-690). Springer. https://doi.org/10.1007/978-3-030-82315-3_40
Aguilar, L., Pérez, L. M., Gallegos, Á., Fores, E., Arias, C. A., Bosch, C., Verdum, M., Jove, P., de Pablo, J. & Morató, J. (2022). Effect of aeration on nitrogen removal-associated microbial community in an innovative vertical cork-based constructed wetland for winery wastewater treatment. Ecological Engineering, 185, Article 106781. https://doi.org/10.1016/j.ecoleng.2022.106781
Baden, S., Fredriksen, S., Christie, H., Eriander, L., Gustafsson, C., Holmer, M., Olesen, B., Thormar, J. & Boström, C. (2022). Effects of depth and overgrowth of ephemeral macroalgae on a remote subtidal NE Atlantic eelgrass (Zostera marina) community. Marine Pollution Bulletin, 177, Article 113497. https://doi.org/10.1016/j.marpolbul.2022.113497
Vera-Puerto, I., Campal, J., Martínez, S., Cortés-Rico, L., Coy, H., Tan, S., Arias, C. A., Baquero-Rodríguez, G. & Rosso, D. (2022). Effects of Environmental Conditions and Bed Configuration on Oxygen Transfer Efficiency in Aerated Constructed Wetlands. Water (Switzerland), 14(20), Article 3284. https://doi.org/10.3390/w14203284
Zuquim, G., Benchimol, M., Tonon, R., Peres, C. A. & Storck-Tonon, D. (2022). Effects of forest degradation on Amazonian ferns in a land-bridge island system as revealed by non-specialist inventories. Ecological Solutions and Evidence, 3(1), Article e12123. https://doi.org/10.1002/2688-8319.12123
Yin, M., Liu, L., Wu, Y., Sheng, W., Ma, X., Du, N., Zhu, P., Wang, C., Cui, Z., Brix, H., Eller, F. & Guo, W. (2022). Effects of litter species and genetic diversity on plant litter decomposition in coastal wetland. Ecological Indicators, 144, Article 109439. https://doi.org/10.1016/j.ecolind.2022.109439
Hylén, A., Bonaglia, S., Robertson, E., Marzocchi, U., Kononets, M. & Hall, P. O. J. (2022). Enhanced benthic nitrous oxide and ammonium production after natural oxygenation of long-term anoxic sediments. Limnology and Oceanography, 67(2), 419-433. https://doi.org/10.1002/lno.12001
Venkataraman, V. V., Miller, C., Foxfoot, I., Lin, B., Petrie, Z. L., Simberloff, R. A., Bernardo, O., Redon, N., Hohn, T. I., Kerby, J. T., Nguyen, N. & Fashing, P. J. (2022). Epizoochorous seed dispersal by an Afroalpine savanna primate. Biotropica, 54(2), 358-369. https://doi.org/10.1111/btp.13057
Panyadee, P., Meunrew, J., Balslev, H. & Inta, A. (2022). Ethnobotany and Ecosystem Services in a Tidal Forest in Thailand. Sustainability, 14(10), Article 6322. https://doi.org/10.3390/su14106322
Hersh, T. A., Gero, S., Rendell, L., Cantor, M., Weilgart, L., Amano, M., Dawson, S. M., Slooten, E., Johnson, C. M., Kerr, I., Payne, R., Rogan, A., Antunes, R., Andrews, O., Ferguson, E. L., Hom-Weaver, C. A., Norris, T. F., Barkley, Y. M., Merkens, K. P. ... Whitehead, H. (2022). Evidence from sperm whale clans of symbolic marking in non-human cultures. Proceedings of the National Academy of Sciences (PNAS), 119(37), Article e2201692119. https://doi.org/10.1073/pnas.2201692119
Milsom, W. K., Kinkead, R., Hedrick, M. S., Gilmour, K., Perry, S., Gargaglioni, L. & Wang, T. (2022). Evolution of vertebrate respiratory central rhythm generators. Respiratory Physiology and Neurobiology, 295, Article 103781. https://doi.org/10.1016/j.resp.2021.103781
Méndez-Quintas, E., Santonja, M., Pérez-González, A., Díaz-Rodríguez, M. & Domínguez, A. S. (2022). Exploring the formation processes on open-air palaeolithic sites: A late Middle Pleistocene Acheulean assemblage at Arbo site (Miño River basin, Spain). Journal of Archaeological Science: Reports, 43, Article 103453. https://doi.org/10.1016/j.jasrep.2022.103453
Findlay, C. R., Hastie, G. D., Farcas, A., Merchant, N. D., Risch, D. & Wilson, B. (2022). Exposure of individual harbour seals (Phoca vitulina) and waters surrounding protected habitats to acoustic deterrent noise from aquaculture. Aquatic Conservation: Marine and Freshwater Ecosystems, 32(5), 766-780. https://doi.org/10.1002/aqc.3800
Izadi, S., Aguilar de Soto, N., Constantine, R. & Johnson, M. (2022). Feeding tactics of resident Bryde's whales in New Zealand. Marine Mammal Science, 38(3), 1104-1117. https://doi.org/10.1111/mms.12918
Christiansen, F., Uhart, M. M., Bejder, L., Clapham, P., Ivashchenko, Y., Tormosov, D., Lewin, N. & Sironi, M. (2022). Fetal growth, birth size and energetic cost of gestation in southern right whales. Journal of Physiology, 600(9), 2245-2266. https://doi.org/10.1113/JP282351
Thomsen, E. M., Sonne, A., Bertelsen, M., Vermeulen, E., Ganswindt, A., Wang, T. & Ochala, J. (2022). Fine-regulation of myosin relaxed states in vertebrate muscle. The FASEB Journal, 36(S1). https://doi.org/10.1096/fasebj.2022.36.S1.R4611
Menail, H. A., Cormier, S. B., Ben Youssef, M., Jørgensen, L. B., Vickruck, J. L., Morin, P., Boudreau, L. H. & Pichaud, N. (2022). Flexible Thermal Sensitivity of Mitochondrial Oxygen Consumption and Substrate Oxidation in Flying Insect Species. Frontiers in Physiology, 13, Article 897174. https://doi.org/10.3389/fphys.2022.897174
Mikkelsen, P. S. (2022). Gael Hamke Bugt - Young Sund. (1 ed.) Xsirius Books. På opdagelse i Nordøstgrønland
Ivy, C. M., Wearing, O. H., Natarajan, C., Schweizer, R. M., Gutiérrez-Pinto, N., Velotta, J. P., Campbell-Staton, S. C., Petersen, E. E., Fago, A., Cheviron, Z. A., Storz, J. F. & Scott, G. R. (2022). Genetic variation in haemoglobin is associated with evolved changes in breathing in high-altitude deer mice. Journal of Experimental Biology, 225(2), Article jeb243595. https://doi.org/10.1242/jeb.243595
Liu, S., Tengstedt, A. N. B., Jacobsen, M. W., Pujolar, J. M., Jónsson, B., Lobón-Cervià, J., Bernatchez, L. & Hansen, M. M. (2022). Genome-wide methylation in the panmictic European eel (Anguilla anguilla). Molecular Ecology, 31(16), 4286-4306. https://doi.org/10.1111/mec.16586
Lembrechts, J. J., van den Hoogen, J., Aalto, J., Ashcroft, M. B., De Frenne, P., Kemppinen, J., Kopecký, M., Luoto, M., Maclean, I. M. D., Crowther, T. W., Bailey, J. J., Haesen, S., Klinges, D. H., Niittynen, P., Scheffers, B. R., Van Meerbeek, K., Aartsma, P., Abdalaze, O., Abedi, M. ... Lenoir, J. (2022). Global maps of soil temperature. Global change biology, 28(9), 3110-3144. https://doi.org/10.1111/gcb.16060
Tietje, M., Antonelli, A., Baker, W. J., Govaerts, R., Smith, S. A. & Eiserhardt, W. L. (2022). Global variation in diversification rate and species richness are unlinked in plants. Proceedings of the National Academy of Sciences (PNAS), 119(27), Article e2120662119. https://doi.org/10.1073/pnas.2120662119
Vuorinen, K. E. M., Austrheim, G., Tremblay, J. P., Myers-Smith, I. H., Hortman, H. I., Frank, P., Barrio, I. C., Dalerum, F., Björkman, M. P., Björk, R. G., Ehrich, D., Sokolov, A., Sokolova, N., Ropars, P., Boudreau, S., Normand, S., Prendin, A. L., Schmidt, N. M., Pacheco-Solana, A. ... Speed, J. D. M. (2022). Growth rings show limited evidence for ungulates' potential to suppress shrubs across the Arctic. Environmental Research Letters, 17(3), Article 034013. https://doi.org/10.1088/1748-9326/ac5207