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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Plessis, A. D. & Vosegaard, H. (2001). Characterisation of strong smooth stability. Mathematica Scandinavica, 88(2), 193-228. http://www.mscand.dk/article.php?id=42
Ørsted, B. & Vargas, J. (2004). Restriction of square-integrable representations: discrete spectrum. Duke Mathematical Journal, 123(3), 609-633.
Agarwal, P., Arge, L., Erickson, J., Yu, H., Albers, S. (Ed.) & Radzik, T. (Ed.) (2004). Efficient Tradeoff Schemes in Data Structures for Querying Moving Objects. In Ikke angivet (3221 i Lecture Notes in Computer Science ed., pp. 4-15). Springer.
Agarwal, S. & Frandsen, G. S. (2004). Binary GCD like Algorithms for Some Complex Quadratic Rings. In D. Buell (Ed.), Algorithmic Number Theory: 6th International Symposium, ANTS-VI, Burlington, VT, USA, June 13-18, 2004, Proceedings (pp. 57-71). Springer. https://doi.org/10.1007/978-3-540-24847-7_4
Ager, M. S. (2004). From Natural Semantics to Abstract Machines. BRICS Report Series, (RS-04-20).
Ager, M. S., Biernacki, D., Danvy, O. & Midtgaard, J. (2003). A Functional Correspondence Between Evaluators and Abstract Machines. In K. Sagonas & D. Miller (Eds.), Proceedings of the 5th ACM SIGPLAN international conference on Principles and practice of declaritive programming (pp. 8-19). Association for Computing Machinery. https://doi.org/10.1145/888251.888254
Ager, M. S., Danvy, O. & Goldberg, M. (2002). A Symmetric Approach to Compilation and Decompilation. In T. Æ. Mogensen, D. Schmidt & H. Sudborough (Eds.), The Essence of Computation: Complexity, Analysis, Transformation (pp. 296-331). Springer. https://doi.org/10.1007/3-540-36377-7_14
Ager, M. S., Danvy, O. & Rohde, H. K. (2003). Fast Partial Evaluation of Pattern Matching in Strings. In Proceedings of the 2003 ACM SIGPLAN workshop on Partial evaluation and semantics-based program manipulation (pp. 3-9). Association for Computing Machinery. https://doi.org/10.1145/777388.777390
Ager, M. S., Danvy, O. & Rohde, H. K. (2002). On obtaining Knuth, Morris, and Pratt's string matcher by partial evaluation. In K. Asai (Ed.), ASIA-PEPM '02 Proceedings of the ASIAN symposium on Partial evaluation and semantics-based program manipulation (pp. 32-46). Association for Computing Machinery. https://doi.org/10.1145/568173.568177
Eriksen, M. A., Buscher, M. & Christensen, M. (2003). Grounded Imagination: Dialogue in Context. Paper presented at Fieldworks - Dialogues between Art and Anthropology, Tate Modern Gallery, London, United Kingdom. http://www.tate.org.uk/modern/eventseducation/fieldworks
Alstrup, S., Brodal, G. S., Gørtz, I. L. & Rauhe, T. (2001). Time and Space Efficient Multi-Method Dispatching. Electronic Colloquium on Computational Complexity, (ITU-TR-2001-8).
Alstrup, S., Brodal, G. S., Gørtz, I. L. & Rauhe, T. (2002). Time and Space Efficient Multi-Method Dispatching. In M. Penttonen & E. M. Schmidt (Eds.), Algorithm Theory — SWAT 2002: 8th Scandinavian Workshop on Algorithm Theory Turku, Finland, July 3–5, 2002 Proceedings (pp. 20-29). Springer. https://doi.org/10.1007/3-540-45471-3_3
Alstrup, S., Brodal, G. S. & Rauhe, T. (2001). Optimal Static Range Reporting in One Dimension. In Proceedings of the thirty-third annual ACM symposium on Theory of computing (pp. 476-482). Association for Computing Machinery. https://doi.org/10.1145/380752.380842
Amtoft, T., Consel, C., Danvy, O. & Malmkjær, K. (2001). The Abstraction and Instantiation of String-Matching Programs. BRICS Report Series, (RS-01-12).
Amtoft, T., Consel, C., Danvy, O. & Malmkjær, K. (2002). The Abstraction and Instantiation of String-Matching Programs. In T. Mogensen, D. Schmidt & H. Sudborough (Eds.), The Essence of Computation: Complexity, Analysis, Transformation (pp. 332-357). Springer. https://doi.org/10.1007/3-540-36377-7_15
Andersen, H. M. & Schultz, U. P. (2004). Declarative Specialization for Object-Oriented-Program Specialization. Paper presented at ACM SIGPLAN 2004 Symposium on Partial Eveluation and Program Manipulation (PEPM'04), Verona, Italy.
Andersen, J. R., Bak, L., Grarup, S., Lund, K. V., Eskildsen, T., Hansen, K. M. & Torgersen, M. (2004). Design, Implementation, and Evaluation of the Resilient Smalltalk Embedded Platform. In Proceedings of the 12th European Smalltalk User Group (ESUG) Conference
Arge, L. (2004). External Geometric Data Structures. In Computing and Combinatorics: 10th Annual International Conference, COCOON 2004, Jeju Island, Korea, August 17-20, 2004. Proceedings (pp. 1). Springer. https://doi.org/10.1007/978-3-540-27798-9_1
Arge, L., Brodal, G. S. & Toma, L. (2004). On External-Memory MST, SSP and Multi-Way Planar Graph Separation. Journal of Algorithms, 53(2), 186-206.
Arge, L., Meyer, U. & Toma, L. (2004). External Memory Algorithms for Diameter and All-Pair Shortest-Paths on Sparse Graphs. In J. Diaz, J. Karhumäki, A. Lepistö & D. Sannella (Eds.), Automata, Languages and Programming: 31st International Colloquium, ICALP 2004, Turku, Finland, July 12-16, 2004. Proceedings (pp. 146-157). Springer. https://doi.org/10.1007/978-3-540-27836-8_15
Arge, L., Samoladas, V. & Yi, K. (2004). Optimal External-Memory Planar Point Enclosure. In S. Albers & T. Radzik (Eds.), Algorithms - ESA 2004: 12th Annual European Symposium, Bergen, Norway, September 14-17, 2004. Proceedings (pp. 40-52). Springer.
Arge, L. & Toma, L. (2004). Simplified External Memory Algorithms for Planar DAGS. In Proceedings of the 9th Scandinavian Workshop on Algorithm Theory, Humlebaek, Denmark, July 8-10, 2004. (3111 i Lecture Notes in Computer Science ed., Vol. 3111/2004, pp. 493-503). Springer.
Arge, L. & Vahrenhold, J. (2004). I/O-Efficient Dynamic Planar Point Location. Computational Geometry, 29(2), 147-162. https://doi.org/10.1016/j.comgeo.2003.04.001
Astesiano, E., Bidoit, M., Krieg-Brückner, B., Mosses, P. D., Sannella, D. & Tarlecki, A. (2002). CASL: The Common Algebraic Specification Language. Theoretical Computer Science, 286(2), 153-196.
Balat, V. & Danvy, O. (2002). Memorization in Type-Directed Partial Evaluation. In D. Batory, C. Consel & W. Taha (Eds.), Generative Programming and Component Engineering: ACM SIGPLAN/SIGSOFT Conference, GPCE 2002 Pittsburgh, PA, USA, October 6–8, 2002 Proceedings (pp. 78-92). Springer. https://doi.org/10.1007/3-540-45821-2_5
Barak, B., Canetti, R., Nielsen, J. B., Pass, R. & IEEE (Ed.) (2004). Universally Composable Protocols with Relaxed Set-Up Assumptions. In Ikke angivet (pp. 186-195). IEEE Press.
Bardram, J. E. (2003). Hospitals of the Future - Ubiquitous Computing support for Medical Work in Hospitals. In J. E. Bardram, I. Korhonen, A. Mihailidis & D. Wan (Eds.), Ubicom 2003: Fifth International Conference on Ubiquitous Computing: Seattle, Washington, USA (Vol. ubicom2003, pp. Artikel 13). Ubicomp.
Bardram, J. E. & Christensen, H. B. (2001). Middleware for Pervasive Healthcare - A White Paper. In B. Guruduth (Ed.), Proceedings of Advanced Topic Workshop -- Middleware for Mobile Computing University of Arizona Press. http://www.cs.arizona.edu/mmc/Program.html
Bardram, J. E. (2004). Activity-Based Support for Mobility and Collaboration in Ubiquitous Computing. In L. Baresi, S. Dustdar, H. Gall & M. Matera (Eds.), Ubiquitous Mobile Information and Collaboration Systems (Lecture Notes in Computer Science ed., Vol. 3272, pp. 169-184). Springer.
Bardram, J. E. (2004). Applications of Context-Aware Computing in Hospital Work - Examples and Design Principles. In 2004 ACM Symposium on Applied Computing: Proceedings of the 2004 ACM symposium on Applied computing (Vol. SESSION: Ubiquitous computing (UC), pp. 1574-1579). Association for Computing Machinery.
Bardram, J. E. (2004). Special issue on Pervasive Healthcare. (8(3) of IEEE Trans. on Inf. Tech. in Biomedicine ed.) IEEE Press.
Bardram, J. E., Adlam, T. (Ed.), Wactlar, H. (Ed.) & Korhonen, I. (Ed.) (2004). The Personal Medical Unit - A Ubiquitous Computing Infrastructure for Personal Pervasive Healthcare. In UbiHealth 2004: The 3nd International Workshop on Ubiquitous Computing for Pervasive Healthcare Applications (Nottingham, England ) UbiComp.org Community.
Bardram, J. E., Bossen, C., Dourish, P. (Ed.), Fitzpatrick, G. (Ed.), Schmidt, K. (Ed.), Kuutti, K. (Ed.) & Karsten, E. H. (Ed.) (2003). Moving to get aHead: Local Mobility and Collaborative Work. In ECSCW' 03: Proceedings of the eighth conference on European Conference on Computer Supported Cooperative Work (Vol. ECSCW, pp. 355-374). Kluwer Academic Publishers.
Bardram, J. E., Bossen, C., Lykke-Olesen, A., Madsen, K. H., Nielsen, R. & MacDonald, N. (Ed.) (2002). Virtual Video Prototyping of Pervasive Healthcare Systems. In Proceedings of the conference on Designing interactive systems: processes, practices, methods, and techniques (pp. 167-177). Association for Computing Machinery.
Bardram, J. & Christensen, H. B. (2004). Open Issues in Activity-Based and Task-Level Computing. In Proceedings of First International Workshop on Computer Support for Human Tasks and Activities (PB-2004-60 of Cent. for Pervasive Comp. Tech. Rep ed., pp. 56-61). Aarhus Universitet.
Bardram, J. (Ed.), Christensen, H. B. (Ed.), Garlan, D. & Sousa, J. (2004). First International Workshop on Computer Support for Human Tasks and Activities. (PB-2004-60 ed.) Center for Pervasive Computing Tech. Report.
Bardram, J., Christensen, H. B. & Hansen, K. M. (2004). Architectural Prototyping: An Approach for Grounding Architectural Design and Learning. In Proceedings of the Fourth Working IEEE/IFIP Conference on Software Architecture: (Wisca 2004) (pp. 15-24). IEEE Computer Society Press.
Bardram, J. E., Kjær, T. A. K. & Nielsen, C. (2003). Supporting Local Mobility in Healthcare by Application Roaming among Heterogeneous Devices. In Lecture Notes in Computer Science: Proceedings of the Fifth International Conference on Human Computer Interaction with Mobile Devices and Services (Vol. 2795, pp. 161-176). Springer.
Bardram, J. E., Larsen, S. B., Mamykina, L. (Ed.), Bardram, J. E. (Ed.), Korhonen, I. (Ed.), Mynatt, E. D. (Ed.) & Pratt, W. (Ed.) (2004). Hopper's Home and Hopper's Hospital: Usability Laboratories for Home Care. In The CHI2004 workshop on HCI and Homecare: Connecting Families and Clinicians
Basin, D. A., Danvy, O. & Harper, R. (2004). Editorial. Higher-Order and Symbolic Computation, 17(3), 171-171. https://doi.org/10.1023/B:LISP.0000029480.20108.7d

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Antoine, A., Labrousse, S., Goulet, P., Chevallay, M., Laborie, J., Picard, B., Guinet, C., Nerini, D., Charrassin, J. B. & Heerah, K. (2023). Beneath the Antarctic sea-ice: Fine-scale analysis of Weddell seal (Leptonychotes weddellii) behavior and predator–prey interactions, using micro-sonar data in Terre Adélie. Ecology and Evolution, 13(12), Article e10796. https://doi.org/10.1002/ece3.10796
Amirbekov, A., Strojsova, M., Nemecek, J., Riha, J., Hrabak, P., Arias, C., Sevcu, A. & Černík, M. (2023). Biodiversity in wetland+ system: a passive solution for HCH dump effluents. Water science and technology : a journal of the International Association on Water Pollution Research, 88(12), 3095-3109. https://doi.org/10.2166/wst.2023.395
Silva, G. C., Solís Neffa, V. G., Zuquim, G. & Balslev, H. (2023). Biogeography and environmental preferences of Butia yatay (Mart.) Becc. Ecology and Evolution, 13(11), Article e10749. https://doi.org/10.1002/ece3.10749
Mantoani, M. C., Quintino , T. B., Emygdio , A. P. M., Guerra , L., Dias , M. A. S., Rodrigues , F., Silva , D. M. C., Filho , V. B. D., Rudke , A. P., Alves , R. A., Martins , L. D., Martins , J. A., Siqueira , A., Boschilia , S. M., Carotenuto , F., Santl-Temkiv, T., Phillips , V. T. J. & Gonçalves , F. L. T. (2023). Biological Characterisation of Hailstones from Two Storms in South Brazil. Aerobiology , 1(2), 98-108. https://doi.org/10.3390/aerobiology1020008
Chua, J. Q. I., Christensen, T. E. K., Palle, J., Wittig, N. K., Grünewald, T. A., Garrevoet, J., Spiers, K. M., Castillo-Michel, H., Schramm, A., Chien, W. L., Sobota, R. M., Birkedal, H. & Miserez, A. (2023). Biomineralization of mantis shrimp dactyl club following molting: Apatite formation and brominated organic components. Acta Biomaterialia, 170, 479-495. https://doi.org/10.1016/j.actbio.2023.08.054
Yu, X. Y., Ye, S. Y., Pei, L. X., Xie, L. J., Krauss, K. W., Chapman, S. K. & Brix, H. (2023). Biophysical warming patterns of an open-top chamber and its short-term influence on a Phragmites wetland ecosystem in China. China Geology, 6(4), 594-610. https://doi.org/10.31035/cg2022064
Laursen, S. F., Hansen, L. S., Bahrndorff, S., Kargo, M., Nielsen, H. M., Sahana, G., Sørensen, J. G. & Kristensen, T. N. (2023). Breeding Insects for Food and Feed. Poster session presented at Agri Food and Climate Circle 2023, København, Denmark.
Rysgaard, S. (2023). Bridging the Fram Strait: GIOS & SIOS collaboration. Abstract from Svalbard science conference, Oslo, Norway.
Riisgård, H. U., Kealy, R. A., Goldstein, J., Brewer, J. R., Solovyeva, V. & Funch, P. (2023). Choanocyte dimensions and pumping rates in the demosponge Halichondria panicea. Journal of Experimental Marine Biology and Ecology, 569, Article 151957. https://doi.org/10.1016/j.jembe.2023.151957
Pasgaard, M., Breed, C., Heines, M., Knudsen, L., Brom, P., Schmidt, A. & Engemann, K. (2023). Citizen Science beyond Science: A Collaborative Approach for Transformative Sustainable Development. Citizen Science: Theory and Practice, 8(1), Article 41. https://doi.org/10.5334/cstp.574
Guo, W. Y., Serra-Diaz, J. M., Eiserhardt, W. L., Maitner, B. S., Merow, C., Violle, C., Pound, M. J., Sun, M., Slik, F., Blach-Overgaard, A., Enquist, B. J. & Svenning, J. C. (2023). Climate change and land use threaten global hotspots of phylogenetic endemism for trees. Nature Communications, 14(1), Article 6950. https://doi.org/10.1038/s41467-023-42671-y
Kambach, S., Sabatini, F. M., Attorre, F., Biurrun, I., Boenisch, G., Bonari, G., Čarni, A., Carranza, M. L., Chiarucci, A., Chytrý, M., Dengler, J., Garbolino, E., Golub, V., Güler, B., Jandt, U., Jansen, J., Jašková, A., Jiménez-Alfaro, B., Karger, D. N. ... Bruelheide, H. (2023). Climate-trait relationships exhibit strong habitat specificity in plant communities across Europe. Nature Communications, 14(1), Article 712. https://doi.org/10.1038/s41467-023-36240-6
Henson, H., Holding, J. M., Meire, L., Rysgaard, S., Stedmon, C., Stuart-Lee, A., Bendtsen, J. & Sejr, M. (2023). Coastal freshening drives acidification state in Greenland fjords. Science of the Total Environment, 855, Article 158962. https://doi.org/10.1016/j.scitotenv.2022.158962
Fonseca Poza, A. A. (2023). Community and control of filamentous sulfur bacteria. [PhD dissertation, Aarhus University]. Aarhus Universitet.
Volf, M., Leong, J. V., de Lima Ferreira, P., Volfová, T., Kozel, P., Matos-Maraví, P., Hörandl, E., Wagner, N. D., Luntamo, N., Salminen, J. P., Segar, S. T. & Sedio, B. E. (2023). Contrasting levels of β-diversity and underlying phylogenetic trends indicate different paths to chemical diversity in highland and lowland willow species. Ecology Letters, 26(9), 1559-1571. https://doi.org/10.1111/ele.14273
Tang, C.-C., Zhang, M., Wang, B., Zou, Z.-S., Yao, X.-Y., Zhou, A.-J., Liu, W., Ren, Y.-X., Li, Z.-H., Wang, A. & He, Z.-W. (2023). Contribution identification of hydrolyzed products of potassium ferrate on promoting short-chain fatty acids production from waste activated sludge. Journal of Environmental Management, 345, Article 118886. https://doi.org/10.1016/j.jenvman.2023.118886
Archer, S. D. J., Lee, K. C., Caruso, T., Alcami, A., Araya, J. G., Cary, S. C., Cowan, D. A., Etchebehere, C., Gantsetseg, B., Gomez-Silva, B., Hartery, S., Hogg, I. D., Kansour, M. K., Lawrence, T., Lee, C. K., Lee, P. K. H., Leopold, M., Leung, M. H. Y., Maki, T. ... Pointing, S. B. (2023). Contribution of soil bacteria to the atmosphere across biomes. Science of the Total Environment, 871, Article 162137. https://doi.org/10.1016/j.scitotenv.2023.162137
Kissling, W. D., Shi, Y., Koma, Z., Meijer, C., Ku, O., Nattino, F., Seijmonsbergen, A. C. & Grootes, M. W. (2023). Country-wide data of ecosystem structure from the third Dutch airborne laser scanning survey. Data in Brief, 46, Article 108798. https://doi.org/10.1016/j.dib.2022.108798
Knudsen, S. W., Hesselsøe, M., Rytter, M., Lillemark, M. R., Tøttrup, A. P., Rahbek, C., Sheard, J. K., Thomsen, P. F., Agersnap, S., Mortensen, P. B. & Møller, P. R. (2023). Detection of environmental DNA from amphibians in Northern Europe applied in citizen science. Environmental DNA, 5(6), 1429-1448. https://doi.org/10.1002/edn3.462
Quibod, N. R. M., Gelin, U., van Langevelde, F. & Tomlinson, K. W. (2023). Diet-specific responses of skull traits to aridity gradients in bovids and cervids. Zoological Journal of the Linnean Society , 199(4), 861-870. https://doi.org/10.1093/zoolinnean/zlad068
Bornø, M. L., Zervas, A., Bak, F., Merl, T., Koren, K., Nicolaisen, M. H., Jensen, L. S. & Müller-Stöver, D. S. (2023). Differential impacts of sewage sludge and biochar on phosphorus-related processes: An imaging study of the rhizosphere. Science of the Total Environment, 905, Article 166888. https://doi.org/10.1016/j.scitotenv.2023.166888
Politi, T., Zilius, M., Bartoli, M., Cardini, U., Marzocchi, U. & Bonaglia, S. (2023). Direct contribution of invertebrate holobionts to methane release from coastal sediments. Limnology and Oceanography Letters, 8(6), 876-884. https://doi.org/10.1002/lol2.10361
Burgers, T. M., Miller, L. A., Rysgaard, S., Mortensen, J., Else, B., Tremblay, J. & Papakyriakou, T. (2023). Distinguishing Physical and Biological Controls on the Carbon Dynamics in a High-Arctic Outlet Strait. Journal of Geophysical Research: Oceans, 128(3), Article e2022JC019393. https://doi.org/10.1029/2022JC019393
Shameer, T. T., Mungi, N. A., Backer, S. J., Raman, S., Reddy, S. R., Easa, P. S. & Sanil, R. (2023). Distribution and conservation status of the endemic Nilgiri marten (Martes gwatkinsii). Mammalia, 87(4), 360-366. https://doi.org/10.1515/mammalia-2021-0113