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Publications

The most recently published scientific articles from the Department of Biology. The overview shows the Department's publications with the latest at the top:

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Alcorta, M., Kirsebom, O. S., Borge, M. J. G., Fynbo, H. O. U., Riisager, K. & Tengblad, O. (2009). A complete kinematics approach to study multi-particle final state reactions. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 605(3), 318-325. https://doi.org/10.1016/j.nima.2009.03.246
Årdal, M. A., Basso, A., Feo, L. D., Patranabis, S. & Wesolowski, B. (2025). A Complete Security Proof of SQIsign. In Y. Tauman Kalai & S. F. Kamara (Eds.), Advances in Cryptology – CRYPTO 2025 - 45th Annual International Cryptology Conference, Proceedings (pp. 190-222) https://doi.org/10.1007/978-3-032-01887-8_7
Hernest, M.-D. & Kohlenbach, U. (2005). A complexity analysis of functional interpretations. Theoretical Computer Science, 338(1-3), 200-246.
Skyum, S. & Valiant, L. (1985). A complexity theory based on Boolean algebra. Journal of the ACM, 32(2), 484-502. https://doi.org/10.1145/3149.3158
Skyum, S. & Valiant, L. (1981). A complexity theory based on Boolean algebra. In 22nd Annual Symposium on Foundations of Computer Science, 1981. SFCS '81. (pp. 244-253). IEEE Computer Society Press. https://doi.org/10.1109/SFCS.1981.3
Grønbæk, K., Nürnberg, P. J., Bucka-Lassen, D., Aagaard Pedersen, C. & Reinert, O. (1999). A component-based open hypermedia approach to integreting structure services. New Review of Hypermedia and Multimedia, 5(1), 179-205. https://doi.org/10.1080/13614569908914713
Bradburn, D. A., Reis, J. C., Moreno, R. Y., Qayyum, S., Viennet, T., Arthanari, H. & Cyert, M. S. (2025). A composite motif in calcimembrin/C16orf74 dictates multimeric dephosphorylation by calcineurin. Nature Communications, 16(1), Article 9941. https://doi.org/10.1038/s41467-025-64884-z
Dovgaliuk, I., Jepsen, L. H., Safin, D. A., Łodziana, Z., Dyadkin, V., Jensen, T. R., Devillers, M. & Filinchuk, Y. (2015). A Composite of Complex and Chemical Hydrides Yields the First Al-Based Amidoborane with Improved Hydrogen Storage Properties. Chemistry - A European Journal, 21(41), 14562-70. https://doi.org/10.1002/chem.201501302
Mailund & Kristensen, L. M. (2002). A Compositional Sweep-Line State Space Exploration Method. In Proceedings of Formal Description Techniques for Distributed Systems and Communication Protocols (FORTE 2002) (pp. 327-343)
Kristensen, L. M. & Mailund, T. (2002). A Compositional Sweep-Line State Space Exploration Method. In Proceedings of the 22nd IFIP WG 6.1 International Conference Houston on Formal Techniques for Networked and Distributed Systems (2529 of Lecture Notes in Computer Science ed., Vol. 2529, pp. 327-343). Springer.
Das Mahapatra, K., Pasquali, L., Søndergaard, J. N., Lapins, J., Nemeth, I. B., Baltás, E., Kemény, L., Homey, B., Moldovan, L. I., Kjems, J., Kutter, C., Sonkoly, E., Kristensen, L. S. & Pivarcsi, A. (2020). A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma. Scientific Reports, 10, Article 3637. https://doi.org/10.1038/s41598-020-59660-6
Freitas, G. P., Kojoj, J., Mavis, C., Creamean, J., Mattsson, F., Nilsson, L., Schmidt, J. S., Adachi, K., Šantl-Temkiv, T., Ahlberg, E., Mohr, C., Riipinen, I. & Zieger, P. (2024). A comprehensive characterisation of natural aerosol sources in the high Arctic during the onset of sea ice melt. Faraday Discussions, 258, 120-146. https://doi.org/10.1039/d4fd00162a
Palkopoulou, E., Lipson, M., Mallick, S., Nielsen, S., Rohland, N., Baleka, S., Karpinski, E., Ivancevic, A. M., To, T.-H., Kortschak, R. D., Raison, J. M., Qu, Z., Chin, T.-J., Alt, K. W., Claesson, S., Dalén, L., MacPhee, R. D. E., Meller, H., Roca, A. L. ... Reich, D. (2018). A comprehensive genomic history of extinct and living elephants. Proceedings of the National Academy of Sciences (PNAS), 115(11), E2566-E2574. https://doi.org/10.1073/pnas.1720554115
Moracho, E., Arroyo, J. M., Arroyo-Correa, B., Calvo, G., Homet, P., Isla, J., Jácome-Flores, M., Mendoza, I., Quintero, E., Rodríguez-Sánchez, F., Villalva, P. & Jordano, P. (2026). A comprehensive, multi-method dataset of plant-frugivore interactions in a Mediterranean hotspot. Scientific Data, 13(1), Article 459. https://doi.org/10.1038/s41597-026-06835-x
Baker, W. J., Bailey, P., Barber, V., Barker, A., Bellot, S., Bishop, D., Botigué, L. R., Brewer, G., Carruthers, T., Clarkson, J. J., Cook, J., Cowan, R. S., Dodsworth, S., Epitawalage, N., Françoso, E., Gallego, B., Johnson, M. G., Kim, J. T., Leempoel, K. ... Forest, F. (2022). A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life. Systematic Biology, 71(2), 301-319. https://doi.org/10.1093/sysbio/syab035
Lauridsen, B. W., Hansen, K. E., Prins, L. T., Røy, H., Mukherjee, R. & Knutz, P. C. (2026). A comprehensive seabed baseline for platform abandonment. Global and Planetary Change, 262, Article 105464. https://doi.org/10.1016/j.gloplacha.2026.105464
Olliges-Stadler, I., Rossell, M. D., Süess, M. J., Ludi, B., Bunk, O., Pedersen, J. S., Birkedal, H. & Niederberger, M. (2013). A comprehensive study of the crystallization mechanism involved in the nonaqueous formation of tungstite. Nanoscale, 5(18), 8517-8525. https://doi.org/10.1039/c3nr02020g
Zwintz, K., Moravveji, E., Papics, P. I., Tkachenko, A., Przybilla, N., Nieva, M. .-F., Kuschnig, R., Antoci, V., Lorenz, D., Themessl, N., Fossati, L. & Barnes, T. G. (2017). A comprehensive study of young B stars in NGC 2264 I. Space photometry and asteroseismology. Astronomy & Astrophysics (A&A), 601, Article A101. https://doi.org/10.1051/0004-6361/201630327
Hatcliff, J. & Danvy, O. (1997). A computational formalization for partial evaluation. Mathematical Structures in Computer Science, 7(5), 507-541. https://doi.org/10.1017/S0960129597002405
Hatcliff, J. & Danvy, O. (1996). A computational formalization for partial evaluation. BRICS Report Series, RS-96-34.
Schauser, L., Fredslund, J., Madsen, L. H., Sandal, N. N. & Stougaard, J. (2005). A computational pipeline towards the development of comparative anchor tagged sequence (CATS) markers. In M. O. Humphrey (Ed.), Proceedings of the International Grassland Congress (IGC) (pp. 73-81). Wageningen Academic Publishers.
Jordan, V. E., Walker, J. A., Beckstrom, T. O., Steely, C. J., McDaniel, C. L., St Romain, C. P., The Baboon Genome Analysis Consortium, Worley, K. C., Phillips-Conroy, J., Jolly, C. J., Rogers, J., Konkel, M. K. & Batzer, M. A. (2018). A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms. Mobile DNA, 9(1), Article 13. https://doi.org/10.1186/s13100-018-0118-3
Ding, V. Z. Y., Dawson, S. S. H., Lau, L. W. Y., Lee, D. R., Galant, N. J., Setiadi, D. H., Jójárt, B., Szöri, M., Mucsi, Z., Viskolcz, B., Jensen, S. K. & Csizmadia, I. G. (2011). A computational study of glutathione and its fragments: N-acetylcisteinylglycine and γ-glutamylmethylamide. Chemical Physics Letters, 507, 168-173. https://doi.org/10.1016/j.cplett.2011.03.067
Madsen, O. L., Torgersen, M., Røn, H. & Thorup, K. K. (1998). A Conceptual Approach to Teaching Object-Orientation to C Programmers. In M. L. Manns (Ed.), Proceedings Educators' Symposium: Conference on Object-Oriented Programming Systems, Languages and Applications (OOPSLA'98). Session: Mastering OO Modeling: Experiences in OO Education. (pp. 3-10). Association for Computing Machinery.
Bødker, S. & Christiansen, E. (1995). A conceptual toolbox for designing CSCW applications. In COOP'95: Proceedings of the First International Workshop on the Design of Cooperative Systems (pp. 266-284). INRIA Press.
Bødker, S., Christiansen, E. & Thüring, M. (1995). A conceptual toolbox for designing CSCW applications. Department of Computer Science, Aarhus University.

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Nazipi, S. (2021). The secondary metabolite potential of social spider nest microbiomes. [PhD dissertation, Aarhus University]. Aarhus Universitet.
Hylleberg, J. (1983). The rooms of the Reference Collection. (In Thai and English). Phuket Marine Biological Center. Special Publications, 1, 24-28.
Hansen, M. N., Lundberg, J. O., Filice, M., Fago, A., Christensen, N. M. G. & Jensen, F. B. (2016). The roles of tissue nitrate reductase activity and myoglobin in securing nitric oxide availability in deeply hypoxic crucian carp. Journal of Experimental Biology, 219(Pt 24), 3875-3883. https://doi.org/10.1242/jeb.149195
Galli, G. L. J., Gesser, H., Taylor, E. W., Shiels, H. A. & Wang, T. (2006). The role of the sarcoplasmic reticulum in the generation of high heart rates and blook pressures in reptiles. Journal of Experimental Biology, 209, 1956-1963.
Cavalli, G., Baattrup-Pedersen, A. & Riis, T. (2011). The role of species functional traits for distributional patterns in lowland stream vegetation. Abstract from 54th Symposium of the International Association for Vegetation Science, Lyon, France.
Nivala, J. A., Headley, T., Brix, H., Kassa, K., Wallace, S., Afferden, M. V. & Müller, R. (2012). The role of plants and design in subsurface flow treatment wetland performance. Abstract from Proceedings from the 7th SWS 2012 European Chapter Meeting, Aarhus, Denmark.
Balslev, H. (2009). The role of palms in human health and well-being in tropical America. In Ikke angivet (pp. 20). National Science Council.
Galli, G. L. J., Skovgaard, N., Abe, A. S., Taylor, E. W. & Wang, T. (2005). The role of nitric oxide in the regulation of the systemic and pulmonary vasculature of the rattlesnake, Crotalus durissus terrificus. Journal of Comparative Physiology B: Biochemical, Systems, and Environmental Physiology, 175, 201-208.
Skovgaard, N., Galli, G., Abe, A., Taylor, E. W. & Wang, T. (2005). The role of nitric oxide in regulation of the cardiovascular system in reptiles. Comp. Biochem. Physiol., Part A., 142, 205-214.
Henty, K., Yosaatmadja, Y., Bønding, S. H., Skommer, J., Birch, N. & Brittain, T. (2009). The role of neuroglobin in the prevention of cell death. Abstract from 34th Congress of the Federation-of-European-Biochemical-Societies, Prague, Czech Republic.
Gartman, A., Findlay, A. J., Hannington, M., Garbe-Schoenberg, D., Jamieson, J. W. & Kwasnitschka, T. (2019). The role of nanoparticles in mediating element deposition and transport at hydrothermal vents. Geochimica et Cosmochimica Acta, 261, 113-131. https://doi.org/10.1016/j.gca.2019.06.045
Lefevre, S., Wang, T. & McKenzie, D. J. (2021). The role of mechanistic physiology in investigating impacts of global warming on fishes. Journal of Experimental Biology, 224(Suppl. 1), Article jeb238840. https://doi.org/10.1242/jeb.238840
Brix, H. & Headley, T. (2007). The role of macrophyte-derived organic carbon for denitrification in treatment wetlands. In Ü. Mander, M. Koiv & C. Vohla (Eds.), 2nd international symposium on wetland pollutant dynamics and control WETPOL 2007 - Extended abstracts. Publicationes instituti geographici universitatis tartuensis 104 (pp. 3-5)
Kuchumov, A. R., Taveau, J. C., Lamy, J. N., Wall, J. S., Weber, R. E. & Vinogradov, S. N. (1999). The role of linkers in the reassembly of the 3.6 MDa hexagonal bilayer hemoglobin from Lumbricus terrestris. Journal of Molecular Biology, 289(5), 1361-74. https://doi.org/10.1006/jmbi.1999.2825
Malhi, Y., Lander, T., le Roux, E., Stevens, N., Macias-Fauria, M., Wedding, L., Girardin, C., Kristensen, J. Å., Sandom, C. J., Evans, T. D., Svenning, J. C. & Canney, S. (2022). The role of large wild animals in climate change mitigation and adaptation. Current Biology, 32(4), R181-R196. https://doi.org/10.1016/j.cub.2022.01.041
Henneberg, A., Sorrell, B. K. & Brix, H. (2012). The role of internal gas transport in Juncus effusus for methane emissions from drained peatlands. Poster session presented at EUROSOIL 2012. Soil Science for the Benefit of Mankind and Environment. 4th International Congress of the European Confederation of Soil Science Societies (ECSSS), 2-6 July, Bari – Italy, Bari, Italy.
Heron, I., Hokland, M., Garotta, G. & Berg, K. (1980). The role of interferon on human lymphocyte histocompatibility antigen expression. Journal of Supramolecular and Cellular Biochemistry, 12(SUPPL. 4), No. 102.
Vollstädt, M. G. R., Jensen, R. D., Maruyama, P. K., Schleuning, M., Araújo-Hoffmann, F. P., Sazima, M., Sonne, J., Schrøder, T. S. O., Møller-Stranges, F., Abrahamczyk, S., Ramírez-Burbano, M. B., de Vasconcelos, M. F., Tinoco, B. A., Maglianesi, M. A., Partida-Lara, R., Vázquez-Pérez, J. R., Enríquez, P. L., Rech, A. R., Coelho, A. G. ... Dalsgaard, B. (2025). The role of insularity: Plants have few ornithophilous traits but are visited by morphologically more distinct hummingbirds in the Caribbean islands. Functional Ecology, 39(7), 1678-1692. https://doi.org/10.1111/1365-2435.70068
Berlinghof, J., Peiffer, F., Marzocchi, U., Munari, M., Quero, G. M., Dennis, L., Wild, C. & Cardini, U. (2022). The role of epiphytes in seagrass productivity under ocean acidification. Scientific Reports, 12, Article 6249. https://doi.org/10.1038/s41598-022-10154-7
Souza-Oliveira, A. F., Zuquim, G., Martins, L. F., Bandeira, L. N., Diele-Viegas, L. M., Cavalcante, V. H. G. L., Baccaro, F., Colli, G. R., Tuomisto, H. & Werneck, F. P. (2024). The role of environmental gradients and microclimates in structuring communities and functional groups of lizards in a rainforest-savanna transition area. PeerJ, 12(4), Article e16986. https://doi.org/10.7717/peerj.16986
Dambros, C., Zuquim, G., Moulatlet, G. M., Costa, F. R. C., Tuomisto, H., Ribas, C. C., Azevedo, R., Baccaro, F., Bobrowiec, P. E. D., Dias, M. S., Emilio, T., Espirito-Santo, H. M. V., Figueiredo, F. O. G., Franklin, E., Freitas, C., Graça, M. B., d’Horta, F., Leitão, R. P., Maximiano, M. ... Magnusson, W. E. (2020). The role of environmental filtering, geographic distance and dispersal barriers in shaping the turnover of plant and animal species in Amazonia. Biodiversity and Conservation, 29(13), 3609-3634. https://doi.org/10.1007/s10531-020-02040-3
Jamison-Daniels, S. L., Kissling, W. D., Botha, M., Harris, M. A., Gordon, C. E. & Greve, M. (2021). The role of deterministic succession during forest development within a southern African savanna. Biotropica, 53(2), 466-476. https://doi.org/10.1111/btp.12890
Marghoub, A., Kéver, L., Williams, C. J. A., Abzhanov, A., Vickaryous, M., Herrel, A., Evans, S. E. & Moazen, M. (2023). The role of cranial osteoderms on the mechanics of the skull in scincid lizards. Anatomical Record, 306(10), 2415-2424. https://doi.org/10.1002/ar.25168
Fago, A. & Jensen, F. B. (2007). The role of blood nitrite in the control of hypoxic vasodilation. Advances in Experimental Biology, 01, 199-212.
Thieltges, D. W., Jensen, K. T. & Poulin, R. (2008). The role of biotic factors in the transmission of free-living endohelminth stages. Parasitology, 135, 407-426.
Straarup, M., Hoppe, L. E., Pooma, R. & Barfod, A. S. (2018). The role of beetles in the pollination of the mangrove palm Nypa fruticans. Nordic Journal of Botany, 36(9), Article 01967. https://doi.org/10.1111/njb.01967