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Publikationer

Følg med i de senest publicerede videnskabelige artikler fra Institut for Biologi. Oversigten viser Instituttets publikationer med de nyeste øverst:

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Baumeister, H., Cerioli, M., Haxthausen, A., Mossakowski, T., Mosses, P. D., Sannella, D., Tarlecki, A. & Mosses, P. D. (red.) (2004). Casl Semantics. I Casl Reference Manual, The Complete Documentation of the Common Algebraic Specification Language (2960 i Lecture Notes in Computer Science udg., s. 115-271). Springer.
Andersen, P., Beaudouin-Lafon, M., Mackay, W. E., Janecek, P., Lassen, M., Jensen, M., Mortensen, K., Munck, S., Ratzer, A., Ravn, K., Christensen, S., Jensen, K., Colom, J. M. (red.) & Koutny, M. (red.) (2001). CPN/Tools: A Post-WIMP Interface for Editing and Simulating Coloured Petri Nets. I G. Goos, J. Hartmanis & J. van Leeuwen (red.), Applications and Theory of Petri Nets 2001 (Bind 2075, s. 71-80). Springer. https://doi.org/10.1007/3-540-45740-2_6
Bender, M. A., Brodal, G. S., Fagerberg, R., Ge, D., He, S., Hu, H., Iacono, J. & López-Ortiz, A. (2003). The Cost of Cache-Oblivious Searching. I Proc. 44th Annual IEEE Symposium on Foundations of Computer Science (FOCS): IEEE Computer Society Press, Washington D.C. (Bind Session 6, s. 271-282). IEEE Computer Society Press.
Bendtsen, C. N., Krink, T., Fogel, D. B. (red.), Yao, X. (red.), Greenwood, G. (red.), Iba, H. (red.), Marrow, P. (red.) & Shackleton, M. (red.) (2002). Dynamic Memory Model for Non-Stationary Optimization. I Proceedings of the 2002 Congress on Evolutionary Computation, 2002, CEC '02 (Bind 1, s. 145-150). IEEE Press.
Bendtsen, C. N., Krink, T., Fogel, D. B. (red.), Yao, X. (red.), Greenwood, G. (red.), Iba, H. (red.), Marrow, P. (red.) & Shackleton, M. (red.) (2002). Phone Routing using the Dynamic Memory Model. I Proceedings of the 2002 Congress on Evolutionary Computation: CEC '02 (Bind 1, s. 992-997). IEEE Press.
Bennedsen, J. & Caspersen, M. E. (2003). Rationale for the Design of a Web-based Programming Course for Adults. I Proccedings of ICOOL 2003 International Conference on Open and Online Learning.
Bennedsen, J. & Caspersen, M. E. (2003). A Model-First Approach to Teaching Introductory Object-Orientation. I Joint proceedings of the Workshops on Multiparadigm Programming with Object-Oriented Languages (MPOOL’03) Declarative Programming in the Context of Object-Oriented Languages (DP-COOL’03): NIC Series (Bind 27). Dorothea Rohrmann. http://www.intermedia.uio.no/cool/WS-03.html
Bennedsen, J. & Caspersen, M. E. (2004). Programming in Context: A Model-First Approach to CS1. I Proceedings of the 35th SIGCSE technical symposium on Computer science education (s. 477-481). Association for Computing Machinery. https://doi.org/10.1145/971300.971461
Bennedsen, J. & Caspersen, M. E. (2004). Teaching Object-Oriented Programming - Towards Teaching a Systematic Programming Process. Afhandling præsenteret på Eighth Workshop on Pedagogies and Tools for the Teaching and Learning of Object Oriented Concepts. Affiliated with 18th European Conference on Object-Oriented Programming (ECOOP 2004), Oslo, Norge.
Bertelsen, O. W., Korpela, M. (red.) & Mursu, A. (red.) (2004). Activity Walkthrough - A Quick User Interface Evaluation without Users. I Ikke angivet (PB-574 of Daimi Reports udg., s. 17-21). Aarhus Universitet.
Bertelsen, O. W. (2003). Activity Walkthrough - a cognitive walkthrough in activity theory terms. I M. Hertzum & S. Heilesen (red.), Proceedings of Third Danish HCI Research Symposium (s. 17-20). Roskilde Universitet.
Bertelsen, O. W. (2004). Panel Session: Activity Theory and User Centered Design of IT Systems - the case of the ActAD approach. Session 20; 15:30 - 17:30. 04.09.2004. I Program and Abstracts: Third Nordic Conference on Cultural and Activity Research. 3-5 September 2004. København (Bind Session 20, s. 30-30 + 118-120). Danmarks Pædagogiske Universitetsforlag.
Bertelsen, O. W. (2001). Proceedings of the First Danish Human-Computer Interaction Research Symposium. I DAIMI PB-555 (s. A-59). Department of Computer Science.
Bertelsen, O. W. (2004). The Activity Walkthrough: An Expert Review Method Based on Activity Theory. I Proceedings of the third Nordic conference on Human-computer interaction (s. 251-254). Association for Computing Machinery. https://doi.org/10.1145/1028014.1028052
Bertelsen, O. W. (2004). Transparency by Tertiary Artefactness. I Workshop on Aesthetic Approaches to Human-Computer Interaction (Bind DAIMI PB-572, s. 1-4). Department of Computer Science.
Bertelsen, O. W., Bødker, S. & Caroll, J. M. (red.) (2003). Activity Theory. I HCI Models, Theories and Frameworks: Toward an Interdisciplinary Science (Bind Chapter 11, s. 291-324). Morgan Kaufmann.
Bertelsen, O. W. & Bødker, S. (2001). Cooperation in massively distributed information spaces. I Proceedings of the seventh conference on European Conference on Computer Supported Cooperative Work (s. 1-17). Kluwer Academic Publishers. http://www.ecscw.org/2001.htm
Bertelsen, O. W. & Bødker, S. (2002). Interaction through multi-artifacts. I S. Bagnara, S. Pozzi, A. Rizzo & P. K. Wright (red.), Proceedings of the 11th European Conference on Cognitive Ergonomics European Association of Cognitive Ergonomcs.
Bertelsen, O. W., Eskildsen, T. & Sperschneider, W. (2003). Programming in the Kitchen. I M. Rauterberg, M. Menozzi & J. Wesson (red.), Human-Computer Interaction INTERACT '03: IFIP TC13 International Conference on Human-Computer Interaction: L2-M-3: Empirical Studies (s. 375-382). IOS Press.
Bertelsen, O. W. & Godsk, M. (2004). WAW - An Activity Theory Based Tool for Early Website Usability Assessment. International Journal of Human Resources Development and Management, 4(1), 73-93.
Bertelsen, O. W., Petersen, M. G. & Pold, S. (red.) (2004). Aesthetic Approaches to Human-Computer Interaction: Proceedings of the NordiCHI 2004 Workshop. Aarhus Universitet. Daimi Report Series (DAIMI PB) Nr. 572
Besenbacher, S., Mailund, T., Westh-Nielsen, L. & Pedersen, C. N. S. (2004). RBT - A Tool for Building Refined Buneman Trees. Bioinformatics, 21(8), 1711-1712.
Bidoit, M. & Mosses, P. D. (red.) (2004). Casl User Manual - Introduction to Using the Common Algebraic Specification Language. (2900 i Lecture Notes in Computer Science udg.) Springer.
Biernacka, M., Biernacki, D. & Danvy, O. (2004). An Operational Foundation for Delimited Continuations. I Proceedings of the Fourth ACM SIGPLAN Workshop on Continuations (s. 25-33). Association for Computing Machinery.
Biernacki, D. & Danvy, O. (2004). From Interpreter to logic Engine by Defunctionalization. I M. Bruynooghe (red.), Logic Based Program Synthesis and Transformation: 13th International Symposium, LOPSTR 2003, Uppsala, Sweden, August 25-27, 2003, Revised Selected Papers (s. 143-159). Springer. https://doi.org/10.1007/978-3-540-25938-1_13
Billington, J., Christensen, S., Hee, K. V., Kindler, E., Kummer, O., Petrucci, L., Post, R., Stehno, C., Weber, M., Aalst, W. M. P. V. D. (red.) & Best, E. (red.) (2003). The Petri Net Markup Language: Concepts, Technology, and Tools. I Ikke angivet (2679 of Lecture Notes in Computer Science udg., s. 483-505). Springer.
Billington, J., Gallasch, G. E., Kristensen, L. M. & Mailund, T. (2004). Exploiting Equivalence Reduction and the Sweep-Line Method for Detecting Terminal States. IEEE Transactions on Systems, Man, and Cybernetics Part A:Systems and Humans, 34(1), 23-37.
Bjerrum, E., Bødker, S., Dourish, P. (red.) & Schmidt, K. (red.) (2003). Learning and living in the "New office". I K. Kuutti, E. H. Karsten, P. Dourish, G. Fitzpatrick & K. Schmidt (red.), Proceedings of the 2003 Eighth European Conference on Computer-Supported Cooperative Work (s. 199-218). Kluwer Academic Publishers.
Black, A. P., Ernst, E., Grogono, P., Sakkinen, M., Arévalo, G., Crespo, Y., Huchard, M. & Dao, M. (red.) (2002). Proceedings of the Inheritance Workshop at ECOOP 2002. I J. Hernández & A. Moreira (red.), Object-Oriented Technology ECOOP 2002 Workshop Reader: ECOOP 2002 Workshops and Posters Málaga, Spain, June 10–14, 2002 Proceedings (s. 117-134). Springer. https://doi.org/10.1007/3-540-36208-8_10
Bouvin, N. O. & Bertelsen, O. W. (red.) (2001). Creating and Styling Fluid Annotations on Third-Party Web Pages. I Proceedings of First Danish Human-Computer Interaction Reseach Symposium (DAIMI PB-555 udg., s. 12-13). Department of Computer Science.
Bouvin, N. O. (2002). Open Hypermedia in a Peer-to-Peer Context. I J. Blustein (red.), Proceedings of the thirteenth ACM conference on Hypertext and hypermedia (Bind SESSION: Next-Gen Open Hypermedia, Part Two, s. 138-139). Association for Computing Machinery. https://doi.org/10.1145/513338.513373
Bouvin, N. O., Kock Will, U., Larsen, D., De Roure, D. C. & Thomsen, M. K. (2002). Peer-to-Peer Hypertext Panel. I HYPERTEXT 2002: Proceedings of the 13th ACM Conference on Hypertext and Hypermedia (Bind SESSION: Narratives and Literary Hypertext, s. 69-71). Society for Industrial and Applied Mathematics.
Bouvin, N. O., Zellweger, P. T., Grønbæk, K. & Mackinlay, J. D. (2002). Fluid annotations through open hypermedia: Using and extending emerging Web standards. I D. Lassner, D. De Roure & A. Iyengar (red.), Proceedings of the 11th international conference on World Wide Web (s. 160-171). Association for Computing Machinery. https://doi.org/10.1145/511446.511468
Brabrand, C., Møller, A. & Schwartzbach, M. I. (2001). Static Validation of Dynamically Generated HTML. I Proceedings of the 2001 ACM SIGPLAN-SIGSOFT workshop on Program analysis for software tools and engineering (s. 38-45). Association for Computing Machinery. https://doi.org/10.1145/379605.379657
Brabrand, C. & Schwartzbach, M. I. (2002). Growing Languages with Metamorphic Syntax Macros. I P. Thiemann (red.), Proceedings of the 2002 ACM SIGPLAN workshop on Partial evaluation and semantics-based program manipulation (s. 31-40). Association for Computing Machinery. https://doi.org/10.1145/503032.503035
Brabrand, C., Schwartzbach, M. I., Vangaard, M., Bryant, B. R. (red.) & Saraiva, J. (red.) (2003). The METAFRONT System: Extensible Parsing and Transformation. I LDTA'2003 - Language descriptions, Tools and Applications. Proceedings (s. 592-611). Elsevier. https://doi.org/10.1016/S1571-0661(05)82622-2
Braga, C. D. O., Haeusler, E. H., Meseguer, J., Mosses, P. D. & Leuschel, M. (red.) (2003). Mapping Modular SOS to Rewriting Logic. I Logic Program Synthesis and Transformation: LOPSTR (Lecture Notes in Computer Science udg., Bind 2664/2003, s. 262-277). Springer.
Braga, C. D. O., Haeusler, E. H., Meseguer, J. & Mosses, P. D. (2003). Mapping Modular SOS to Rewriting Logic. (s. 262-277). Springer LNCS.
Brand, M. V. D., Mosses, P. D. & Iversen, J. (2004). An Action Environment. I Proceedings of the Fourth Workshop on Language Descriptions, Tools and Applications (Bind 110, s. 149-168). Electronic Notes in Theoretical Computer Science.
Brodal, G. S. (2004). Cache-Oblivious Algorithms and Data Structures. I T. Hagerup & J. Katajainen (red.), Algorithm Theory - SWAT 2004: 9th Scandinavian Workshop on Algorithm Theory, Humlebaek, Denmark, July 8-10, 2004. Proceedings (s. 3-13). Springer. https://doi.org/10.1007/978-3-540-27810-8_2
Brodal, G. S. & Fagerberg, R. (2002). Cache Oblivious Distribution Sweeping. I P. Widmayer, S. Eidenbenz, F. Triguero, R. Morales, R. Conejo & M. Hennessy (red.), Automata, Languages and Programming: 29th International Colloquium, ICALP 2002 Málaga, Spain, July 8–13, 2002 Proceedings (s. 426-438). Springer. https://doi.org/10.1007/3-540-45465-9_37
Brodal, G. S., Fagerberg, R., Bose, P. (red.) & Morin, P. (red.) (2002). Funnel Heap - A Cache Oblivious Priority Queue. I P. Bose & P. Morin (red.), Algorithms and Computation: 13th International Symposium, ISAAC 2002 Vancouver, BC, Canada, November 21–23, 2002 Proceedings (s. 219-228). Springer. https://doi.org/10.1007/3-540-36136-7_20
Brodal, G. S., Fagerberg, R. & Farach-Colton, M. (red.) (2003). Lower Bounds for External Memory Dictionaries. I Proceedings of the fourteenth annual ACM-SIAM symposium on Discrete algorithms (s. 546-554). Society for Industrial and Applied Mathematics.
Brodal, G. S., Fagerberg, R. & Goemans, M. X. (red.) (2003). On the Limits of Cache-Obliviousness. I Proceedings of the thirty-fifth annual ACM symposium on Theory of computing (s. 307-315). Association for Computing Machinery. https://doi.org/10.1145/780542.780589
Brodal, G. S., Fagerberg, R. & Jacob, R. (2001). Cache Oblivious Search Trees via Binary Trees of Small Height. BRICS Report Series, (RS-01-36), 1-20.

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Zhao, M., Li, P., Song, W., Chu, X., Eller, F., Wang, X., Liu, J., Xiao, L., Wei, S., Li, X. & Han, G. (2023). Inundation depth stimulates plant-mediated CH4 emissions by increasing ecosystem carbon uptake and plant height in an estuarine wetland. Functional Ecology, 37(3), 536-550. https://doi.org/10.1111/1365-2435.14258
Fløjgaard, C., Buitenwerf, R. & Ejrnæs, R. (2023). Kortlægning af tætheder af store planteædere i helårsgræsningsprojekter. Aarhus University, DCE - Danish Centre for Environment and Energy. Fagligt notat fra DCE – Nationalt Center for Miljø og Energi (2020-...) Bind 2323 Nr. 5 https://dce.au.dk/fileadmin/dce.au.dk/Udgivelser/Notater_2023/N2023_05.pdf
Martínez Villar, M., Germil, M., Pavón-Peláez, C., Tomasco, I. H., Bilde, T., Toft, S. & Albo, M. J. (2023). Lack of Female Preference for Nuptial Gifts May Have Led to Loss of the Male Sexual Trait. Evolutionary Biology, 50(3), 318-331. https://doi.org/10.1007/s11692-023-09606-3
Post, E., Kaarlejärvi, E., Macias-Fauria, M., Watts, D. A., Bøving, P. S., Cahoon, S. M. P., Conor Higgins, R., John, C., Kerby, J. T., Pedersen, C., Post, M. & Sullivan, P. F. (2023). Large herbivore diversity slows sea ice associated decline in arctic tundra diversity. Science, 380(6651), 1282-1287. https://doi.org/10.1126/science.add2679
Walker, T. W. N., Schrodt, F., Allard, P. M., Defossez, E., Jassey, V. E. J., Schuman, M. C., Alexander, J. M., Baines, O., Baldy, V., Bardgett, R. D., Capdevila, P., Coley, P. D., van Dam, N. M., David, B., Descombes, P., Endara, M. J., Fernandez, C., Forrister, D., Gargallo-Garriga, A. ... Peñuelas, J. (2023). Leaf metabolic traits reveal hidden dimensions of plant form and function. Science Advances, 9(35), Artikel eadi4029. https://doi.org/10.1126/sciadv.adi4029
Arias, C. A., Vera-Puerto, I. L. & Chaparro, T. R. (2023). Lecciones aprendidas. I K. Cross, K. Tondera, A. Rizzo, L. Andrews, B. Pucher, D. Istenič, N. Karres & R. McDonald (red.), Soluciones basadas en la naturaleza para el tratamiento de aguas residuales (s. 332-337). IWA Publishing. https://doi.org/10.2166/9781789063035
Barfod, A. S., Pasgaard, M. & Svenning, J.-C. (2023). Livet på land: livet på land kræver gennemgribende samfundsforandringer. I S. Hildebrandt (red.), Det Bæredygtige Danmark. : med Verdensmålene mod 2030 (s. 395-416). Djøf Forlag.
El-Saadi, M. I., Brzezinski, K., Hinz, A., Phillips, L., Wong, A., Gerber, L., Overgaard, J. & MacMillan, H. A. (2023). Locust gut epithelia do not become more permeable to fluorescent dextran and bacteria in the cold. Journal of Experimental Biology, 226(16), Artikel jeb246306. https://doi.org/10.1242/jeb.246306
Xu, S., Marcon, A., Bertelsen, R. J., Benediktsdottir, B., Brandt, J., Engemann, K., Frohn, L. M., Geels, C., Gislason, T., Heinrich, J., Holm, M., Janson, C., Markevych, I., Modig, L., Orru, H., Schlünssen, V., Sigsgaard, T. & Johannessen, A. (2023). Long-term exposure to low-level air pollution and greenness and mortality in Northern Europe: The Life-GAP project. Environment International, 181, Artikel 108257. https://doi.org/10.1016/j.envint.2023.108257
Bundgaard, A., Gruszczyk, A. V., Prag, H. A., Williams, C., McIntyre, A., Ruhr, I. M., James, A. M., Galli, G. L. J., Murphy, M. P. & Fago, A. (2023). Low production of mitochondrial reactive oxygen species after anoxia and reoxygenation in turtle hearts. Journal of Experimental Biology, 226(9), Artikel jeb245516. https://doi.org/10.1242/jeb.245516
ter Steege, H., Pitman, N. C. A., do Amaral, I. L., de Souza Coelho, L., de Almeida Matos, F. D., de Andrade Lima Filho, D., Salomão, R. P., Wittmann, F., Castilho, C. V., Guevara, J. E., Veiga Carim, M. D. J., Phillips, O. L., Magnusson, W. E., Sabatier, D., Revilla, J. D. C., Molino, J. F., Irume, M. V., Martins, M. P., da Silva Guimarães, J. R. ... Melgaço, K. (2023). Mapping density, diversity and species-richness of the Amazon tree flora. Communications Biology, 6(1), Artikel 1130. https://doi.org/10.1038/s42003-023-05514-6
Klein, J., Vestbo, S., Funch, P. & Anna, T. (2023). Marine Hitchhikers and Nested Holobionts: Is the Aquarium Trade Creating Weedy Sponge Invaders? I N. Bubandt, A. O. Andersen & R. Cypher (red.), Rubber Boots Methods for the Anthropocene: Doing Fieldwork in Multispecies Worlds (s. 249-275). University of Minnesota Press.
Petersson Sjögren, M., Alsved, M., Šantl-Temkiv, T., Bjerring Kristensen, T. & Löndahl, J. (2023). Measurement report: Atmospheric fluorescent bioaerosol concentrations measured during 18 months in a coniferous forest in the south of Sweden. Atmospheric Chemistry and Physics, 23(9), 4977-4992. https://doi.org/10.5194/acp-23-4977-2023
Zhai, S., Zhang, D., Liu, W., Wang, B., Liang, B., Liu, C., Zeng, R., Hou, Y., Cheng, H. Y. & Wang, A. (2023). Microbial electrochemical technologies assisted nitrogen recovery from different wastewater sources: Performance, life cycle assessment, and challenges. Resources, Conservation & Recycling, 194, Artikel 107000. https://doi.org/10.1016/j.resconrec.2023.107000
Rysgaard, S. (2023). Microbial life in Arctic sea ice. Abstract fra Tara Polar Drift, Paris, Frankrig.
Mueller, P., Kutzbach, L., Mozdzer, T. J., Jespersen, E., Barber, D. C. & Eller, F. (2023). Minerogenic salt marshes can function as important inorganic carbon stores. Limnology and Oceanography, 68(4), 942-952. https://doi.org/10.1002/lno.12322
Olsen, B. E., Normand, S., Svenning, J.-C., Timmermann, K., Kragh, T., Kaae, B. C., Madsen, N. & Strange, N. (2023). Mod robuste økosystemer: Anbefalinger til en dansk lov om biodiversitet. Biodiversitetsrådet.
Safi, A. U. R., Bendixen, E., Rahman, H., Khattak, B., Wu, W., Ullah, W., Khan, N., Ali, F., Yasin, N. & Qasim, M. (2023). Molecular identification and differential proteomics of drug resistant Salmonella Typhi. Diagnostic Microbiology and Infectious Disease, 105(4), Artikel 115883. https://doi.org/10.1016/j.diagmicrobio.2022.115883
Peripato, V., Levis, C., Moreira, G. A., Gamerman, D., Ter Steege, H., Pitman, N. C. A., de Souza, J. G., Iriarte, J., Robinson, M., Junqueira, A. B., Trindade, T. B., de Almeida, F. O., Moraes, C. D. P., Lombardo, U., Tamanaha, E. K., Maezumi, S. Y., Ometto, J. P. H. B., Braga, J. R. G., Campanharo, W. A. ... Aragão, L. E. O. C. (2023). More than 10,000 pre-Columbian earthworks are still hidden throughout Amazonia. Science, 382(6666), 103-109. https://doi.org/10.1126/science.ade2541
Bernard, C., Santos, G. S., Deere, J. A., Rodriguez-Caro, R., Capdevila, P., Kusch, E., Gascoigne, S. J. L., Jackson, J. & Salguero-Gómez, R. (2023). MOSAIC - A Unified Trait Database to Complement Structured Population Models. Scientific Data, 10(1), Artikel 335. https://doi.org/10.1038/s41597-023-02070-w
Hu, Y., Wei, F., Fu, B., Wang, S., Wang, L. & Chen, Y. (2023). Multifaceted characteristics of aridity changes and causal mechanisms in Chinese drylands. Progress in Physical Geography, 47(3), 438-453. https://doi.org/10.1177/03091333221129867