Publikationer

Følg med i de senest publicerede videnskabelige artikler fra Institut for Biologi. Oversigten viser Instituttets publikationer med de nyeste øverst:

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Arge, L., Bender, M. A., Demaine, E. D. & Munro, J. I. (2007). Cache-Oblivious Priority Queue and Graph Algorithm Applications. S I A M Journal on Computing, 36(6), 1672-1695. https://doi.org/10.1145/509907.509950

Arge, L. & Zeh, N. (2010). External-Memory Algorithms and Data Structures: General concepts and techniques. I M. J. Atallah & M. Blanton (red.), Algorithms and Theory of Computation Handbook (second edition) CRC Press.

Arge, L., Brodal, G. S. & Satti, S. R. (2008). External Memory Planar Point Location with Logarithmic Updates. I M. Teilaud (red.), Proceedings of the twenty-fourth annual symposium on Computational geometry (s. 139-147). Association for Computing Machinery. https://doi.org/10.1145/1377676.1377699

Arge, L., Cachin, C., Jurdzinski, T. & Tarlecki, A. (red.) (2007). Proceedings of 34th International Colloquium on Automata, Language and Programming. ICALP'07. Springer.

Arge, L., Hoffmann, M. & Welzl, E. (red.) (2007). Algorithms - ESA 2007: 15th Annual European Symposium, Eilat, Israel, October 8-10, 2007. Proceedings. Springer. Lecture Notes in Computer Science Bind 4698 https://doi.org/10.1007/978-3-540-75520-3

Arge, L. & Freivalds, R. M. (red.) (2006). Algorithm Theory - SWAT 2006: 10th Scandinavian Workshop on Algorithm Theory, Riga, Latvia, July 6-8, 2006. Proceedings. Springer. Lecture Notes in Computer Science Bind 4059

Arge, L., de Berg, M. & Haverkort, H. (2005). Cache-Oblivious R-trees. I J. Mitchell & G. Rote (red.), Proceedings of 21th ACM Symposium on Computational Geometry (s. 170-179). Association for Computing Machinery.

Danvy, O. & Millikin, K. (2009). Refunctionalization at Work. Science of Computer Programming, 74(8), 534-549. https://doi.org/10.1016/j.scico.2009.02.001

Danvy, O. & Millikin, K. (2008). On the equivalence between small-step and big-step abstract machines: a simple application of lightweight fusion. Information Processing Letters, 106(3), 100-109.

Danvy, O. & Millikin, K. (2007). On One-Pass CPS Transformations. Journal of Functional Programming, 17(6), 793-812.

Hansen, K. A. (2007). Computing Symmetric Boolean Functions by Circuits with Few Exact Threshold Gates. I G. Lin (red.), Computing and Combinatorics: 13th Annual International Conference, COCOON 2007, Banff, Canada, July 16-19, 2007. Proceedings (s. 448-458). Springer. https://doi.org/10.1007/978-3-540-73545-8_44

Caspersen, M. E., Alphonce, C. & Decker, A. (2007). Killer "Killer Examples" for Design Patterns. ACM Inroads, 39(1), 228-232. https://doi.org/10.1145/1227504.1227390

Bennedsen, J. & Caspersen, M. E. (2008). Optimists Have More Fun, But Do They Learn Better? On the Influence of Emotional and Social Factors on Learning CS and Math. Computer Science Education, 18(1), 1-16. https://doi.org/10.1080/08993400701791133

Caspersen, M. E., Bennedsen, J. & Larsen, K. D. (2007). Mental Models and Programming Aptitude. ACM Inroads, 39(3), 206-210. https://doi.org/10.1145/1269900.1268845

Caspersen, M. E., Börstler, J. & Nordström, M. (2007). Beauty and the Beast: Toward a Measurement Framework for Example Program Quality. Department of Computing Science, Umeå University, Sweden.

Bennedsen, J. & Caspersen, M. E. (2007). Failure Rates in Introductory Programming. ACM Inroads, 39(2), 32-36. https://doi.org/10.1145/1272848.1272879

Caspersen, M. E. & Bennedsen, J. (2007). Instructional Design of a Programming Course: A Learning Theoretic Approach. I Proceedings of the Third International Workshop on Computing Education Research (s. 111-122). Association for Computing Machinery. https://doi.org/10.1145/1288580.1288595

Weyer, K., Boldt, H. B., Poulsen, C. B., Kjaer-Sorensen, K., Gyrup, C. & Oxvig, C. (2007). A substrate specificity-determining unit of three Lin12-Notch repeat modules is formed in trans within the pappalysin-1 dimer and requires a sequence stretch C-terminal to the third module. Journal of Biological Chemistry, 282(15), 10988-99. https://doi.org/10.1074/jbc.M607903200

Jørgensen, J.-E. & Keller, L. (2008). Magnetic ordering in HoBaCo₂O_5.5. Physical Review B, 77, 24427-1-7.

Christensen, A. N., Jensen, T. R., Bahl, C. R. H. & DiMasi, E. (2007). Nano size crystals of goethite, α-FeOOH: Synthesis and thermal transformation. Journal of Solid State Chemistry, 180, 1431-1435.

Zande, L. V. D., Vliet, M. V. D., Pertoldi, C., Loeschcke, V., Müskens, G. & Bijlsma, R. (2007). Genetic structure within and among regional populations of the Eurasian badger (Meles meles) from Denmark and the Netherlands. Journal of Zoology, 271, 302-309. https://doi.org/10.1111/j.1469-7998.2006.00206.x

Nielsen, R. K., Pertoldi, C. & Loeschcke, V. (2007). Genetic evaluation of the captive breeding program of the Persian wild ass. Journal of Zoology, 272, 349-357. https://doi.org/10.1111/j.1469-7998.2007.00294.x

Hájková, P., Pertoldi, C., Ukendt, Z., Roche, K., Hájek, B., Bryja, J. & Zima, J. (2007). Genetic structure and evidence for recent population decline in Eurasian otter populations in the Czech and Slovak Republics: implications for conservation. Journal of Zoology, 272, 1-9. https://doi.org/10.1111/j.1469-7998.2006.00259.x

Barkhordarian, G., Jensen, T. R., Doppiu, S., Bösenberg, U., Borgschulte, A., Gremaud, R., Cerenius, Y., Dornheim, M., Klassen, T. & Bormann, R. (2008). Formation of Ca(BH₄)₂ from Hydrogenation of CaH₂ + MgB₂ Composite. Journal of Physical Chemistry Part C: Nanomaterials and Interfaces, 112, 2743-2749.

Hoffmann, HJ., Tabaksblat, LM., Enghild, J. J. & Dahl, R. (2008). Human skin keratins are the major proteins in exhaled breath condensate. European Respiratory Journal.

Gunnlaugsson, H. P., Merrison, J. P., Mossin, L. A., Nørnberg, P., Sanden, J., Uggerhøj, E. & Weyer, G. (2002). Can Mössbauer spectroscopy reveal the origin of magnetic soil in Denmark. Proceedings of the 5th Seeheim conf. on Mössbauer spec.

Damgaard, C. K., Kahns, S., Lykke-Andersen, S., Nielsen, A. L., Jensen, T. H. & Kjems, J. (2008). A 5' splice site enhances the recruitment of basal transcription initiation factors in vivo. Molecular Cell, 29(2), 271-278. https://doi.org/10.1016/j.molcel.2007.11.035, https://doi.org/10.1016/j.molcel.2007.11.035

Staudt Kvistgaard, A., Sørensen, E. S. & Burling, H. (2007). Bovine osteopontin formulations for the improvement of the wound healing process. (Patentnummer WO 2007/068252 A2).

Christensen, B., Petersen, T. E. & Sørensen, E. S. (2008). Posttranslational modification and proteolytic processing of urinary osteopontin. Biochemical Journal, 411, 53-61.

Hunter, G. K., Grohe, B., Jeffrey, S., O’Young, J., Sørensen, E. S. & Goldberg, H. A. (2009). Role of phosphate groups in inhibition of calcium oxalate crystal growth by osteopontin. Cells, Tissues, Organs, 189, 44-50.

Kristensen, P., Ueda, H., Koijma, M., Ihara, M. & Kawakami, M. (2008). Open Sandwich ELISA Libraries. (Patentnummer JP2008-032941).

Pertoldi, C., Bijlsma, R. & Loeschcke, V. (2008). Conservation genetics in a globally changing environment: present problems, paradoxes and future challenges. Biodiversity and Conservation, 16, 4147-4163.

Pertoldi, C., Bijlsma, R. & Loeschcke, V. (2007). Integrating population genetics and conservation biology: merging theoretical, experimental and applied approaches (Potsdam, Germany). Conservation Genetics, 8, 1267-1268.

Stavru, F., Nautrup-Pedersen, G., Cordes, V. C. & Görlich, D. (2006). Nuclear pore complex assembly and maintenance in POM121- and gp210-deficient cells. Journal of Cell Biology, 173(4), 477-83. https://doi.org/10.1083/jcb.200601002

Nautrup Pedersen, G., Nyborg, J. & Clark, B. F. (1999). Macromolecular mimicry of nucleic acid and protein. IUBMB Life, 48(1), 13-8.

Holm, H. (2007). Cohen-Macaulay homological dimensions. Rendiconti del Seminario Matematico della Università di Padova, 117, 87-112.

Klokmose, C. N. & Beaudouin-Lafon, M. (2008). From Applications to Ubiquitous Instrumental Interaction. I CHI '00: Proceedings of the SIGCHI conference on Human factors in computing systems (s. 446-453). Association for Computing Machinery.

Berlin, R. & Klokmose, C. N. (2007). Undo in Dynamic and Distributed User Interfaces. Poster-session præsenteret på Danish HCI Research Symposium, DHRS 2007, København, Danmark.

Klokmose, C. N. (2007). Towards an Instrumental Paradigm for Ubiquitous Interaction. I A. C. Brodersen, S. Bødker & C. N. Klokmose (red.), Multiple and Ubiquitous Interaction, 28. - 30. March 2007: Book of Abstracts (s. 33-35)

Klokmose, C. N. (2007). An Instrumental Paradigm for Ubiquitous Interaction. I Conference Proceedings of ECCE 2007 Association for Computing Machinery.

Klokmose, C. N. (2007). From a Theoretical Understanding to Practical Design of Ubiquitous User Interfaces. Progress Report: Progress Report.

Klokmose, C. N. (2008). An Instrumental Paradigm for Ubiquitous Interaction. I W. P. Brinkman, D. H. Ham & B. L. W. Wong (red.), ACM International Conference Proceeding Series; vol 250: Proceedings of the 14th European conference on Cognitive ergonomics: invent! explore! (Bind 250, s. 257-260). Association for Computing Machinery.

Knudsen, C. R., Mansilla, F., Nautrup Pedersen, G. & Clark, B. F. C. (1999). Point mutants of elongation factor Tu from E.coli impaired in binding aminoacyl-tRNA. I RNA Biochemistry and Biotechnology: Barciszewski, J., Clark, B.F.C. (ed.) (s. 169-193). NATO ASI Series, Kluwer Academic Publishers.

Hubalek, F. & Sgarra, C. (2007). Quadratic hedging for the Bates model. International Journal of Theoretical and Applied Finance, 10(5), 873-885.

Mathiasen, N. R. (2007). Usable Security Revisited. Poster-session præsenteret på Danish HCI Research Symposium, DHRS 2007, København, Danmark.

Wang, Y., Thyssen, A., Westergaard, O. & Andersen, A. H. (2000). Position-specific effect of ribonucleotides on the cleavage activity of human topoisomerase II. Nucleic Acids Research, 28(24), 4815-21.

Jonstrup, A. T., Andersen, C. L., Wang, Y., Koch, J. & Andersen, A. H. (2001). Topoisomerase II interacts with hairpin structures formed within human centromeric DNA. Anticancer Research, 21(3A), 1555.

Madsen, I. & Weiss, M. (2007). The stable moduli space of Riemann surfaces: Mumford's conjecture. Annals of Mathematics, 165(3), 843-941. http://projecteuclid.org/euclid.annm/1191594071

Barndorff-Nielsen, O. E. & Maejima, M. (2008). Semigroups of Upsilon transformations. Stochastic Processes and Their Applications, 118(12), 2334-2343. https://doi.org/10.1016/j.spa.2008.01.003

Nautrup-Pedersen, G., Dam, S., Laursen, B. S., Siegumfeldt, A. L., Ørnfelt, J. H., Lorentzen, A. M., Roepstorff, P. & Stougaard, J. (2008). Proteomics of Lotus japonicus seeds and pod walls. Proteomica, (1), 118.

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